prot_Ecto-sp8_S_contig10224.367.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10224.367.1
Unique Nameprot_Ecto-sp8_S_contig10224.367.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp8_S_contig10224.367.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.050e-41
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKKK 70
            M+ESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKKK
Sbjct:  161 MLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKKK 230          
BLAST of mRNA_Ecto-sp8_S_contig10224.367.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 58.9 bits (141), Expect = 9.930e-9
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 VESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ--LATITAQCNESDYAKVGKTIDSLIAS 65
            +ES + + +Y YDY V QEGRPEK +KT++ + P++    L T TAQC+ +DY + G  + ++ +S
Sbjct:  159 LESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGTLLSAIASS 224          
BLAST of mRNA_Ecto-sp8_S_contig10224.367.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.680e-8
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    8 KNS-YVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTID 60
            KNS Y YDYI+ QEGRPEKH+K++W +      L T+TAQC+E++Y      +D
Sbjct:  101 KNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153          
BLAST of mRNA_Ecto-sp8_S_contig10224.367.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 48.9 bits (115), Expect = 4.520e-5
Identity = 24/67 (35.82%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    1 MVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ--LATITAQCNESDYAKVGKTIDSLIAS 65
            M+E  + K S+VYDY + Q+G P +H++++  +  +     L T+TAQC E  +A V  T  ++I S
Sbjct:  147 MLEQASVKGSFVYDYTIQQQGGPMRHLRSLLAIKADGAASVLITLTAQCLEPKHAAVAATFKAIIES 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10224.367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSF3_ECTSI5.050e-4198.57PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6V1S113_HETAK9.930e-940.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZDA3_9STRA2.680e-850.00PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A0M0J7U2_9EUKA4.520e-535.82Psbp domain-containing protein chloroplastic-like ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10224contigEcto-sp8_S_contig10224:830..2218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10224.367.1mRNA_Ecto-sp8_S_contig10224.367.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10224 67..4903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10224.367.1 ID=prot_Ecto-sp8_S_contig10224.367.1|Name=mRNA_Ecto-sp8_S_contig10224.367.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=71bp
MVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNES
DYAKVGKTIDSLIASVTKKK*
back to top