mRNA_Ecto-sp8_S_contig10214.351.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10214.351.1
Unique NamemRNA_Ecto-sp8_S_contig10214.351.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: D7FSX1_ECTSI (TPR Domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX1_ECTSI)

HSP 1 Score: 741 bits (1914), Expect = 2.930e-268
Identity = 371/400 (92.75%), Postives = 380/400 (95.00%), Query Frame = 1
Query:    1 RPFDPKAYYNHGVCIDALGEKEAALSSFEKAFELQPSLADAGANAAGLLIQTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVSMPNQPRRRCSTLQSVPGRPVPPNSRTGPPALGVIRGHRSAPQNRVVYYVGKIQTKKRGP 1200
            RPFDPKAYYNHGVCID+LGEKEAALSSFEKAFELQPSLADAGANAAGLLIQT EAERACTLC+LALDGNPDCAAALYNLNTALRMAGRPREAIALSWRW+RERLPAGTPSYASAVSLE LA ASSSNSEDG NPHPSAVATTRAELP FCGS+GGFE EVGKRMVC+ED SAEGSAA+EQDADGA CVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVY+DLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVSMPNQPRRRCS LQSVPGRPVPPNSRTGPPAL VI  H S PQNRV+ +     TKKRGP
Sbjct:   37 RPFDPKAYYNHGVCIDSLGEKEAALSSFEKAFELQPSLADAGANAAGLLIQTDEAERACTLCYLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWIRERLPAGTPSYASAVSLETLAAASSSNSEDGPNPHPSAVATTRAELPIFCGSMGGFESEVGKRMVCIEDCSAEGSAAKEQDADGASCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYIDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVSMPNQPRRRCSALQSVPGRPVPPNSRTGPPALDVICCHLSTPQNRVLSW-----TKKRGP 431          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A6H5J8Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y9_9PHAE)

HSP 1 Score: 625 bits (1613), Expect = 3.150e-224
Identity = 315/341 (92.38%), Postives = 325/341 (95.31%), Query Frame = 1
Query:    1 RPFDPKAYYNHGVCIDALGEKEAALSSFEKAFELQPSLADAGANAAGLLIQTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVS 1023
            RPFDPKAYYNHGVCIDALGEKEAALSSFEKAF+LQPSLADAGANAAGLLIQ+GEAERACTLC LALDGNPDCAAALYNLNTALRMAGRPREAIALSWRW+RERLPAGTPSYASAVSLE LA ASSSNSEDG NP PSAVATTRAELP F GSIGGFE EVGKRMVCVED SAEGSAA+EQ ADGA  +TVVCIRWGPKYGPEYVERLAAGVRRNL RDHRFVC+TDDVEALSEMPGVVARPLGSAR GEWRGWWHKAFLFSRETTLAGRV+Y+DLDTVIA SLD+IAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAG EVNTVQPV+DLLKEAYAVVS
Sbjct:    2 RPFDPKAYYNHGVCIDALGEKEAALSSFEKAFDLQPSLADAGANAAGLLIQSGEAERACTLCLLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWIRERLPAGTPSYASAVSLENLAAASSSNSEDGGNPRPSAVATTRAELPRFGGSIGGFESEVGKRMVCVEDCSAEGSAAKEQGADGASRLTVVCIRWGPKYGPEYVERLAAGVRRNLLRDHRFVCFTDDVEALSEMPGVVARPLGSARRGEWRGWWHKAFLFSRETTLAGRVMYIDLDTVIADSLDDIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGSEVNTVQPVYDLLKEAYAVVS 342          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A1V9Z1Y7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Y7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.640e-34
Identity = 71/154 (46.10%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  562 VTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVS 1023
            ++VVC++WG KYGPEYV RL +GVRR+LRRD +F C+T+    L+    V+  PL       + GWW+KA LF+ ++ + GRVVY+DLDTV+ G L  +  Y G F  L+ + M NERR GG+NSSVM W AG    T   + +LL + +  V+
Sbjct:  174 LSVVCVKWGTKYGPEYVNRLLSGVRRHLRRDFQFHCFTEAPHGLAS--DVLVHPLREG----FTGWWNKAQLFAADSPVHGRVVYIDLDTVVVGDLTALFSYTGNFGTLATDDMHNERRAGGINSSVMIWTAG----TCSDIFELLHQHWKAVA 317          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: G4YEH6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEH6_PHYSP)

HSP 1 Score: 141 bits (356), Expect = 4.910e-34
Identity = 111/337 (32.94%), Postives = 156/337 (46.29%), Query Frame = 1
Query:   55 GEKEAALSSFEKAFELQPSLADAGANAAGLLI--QTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRR-DHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLA------GRVVYMDLDTVIAGSLDEIAGYAGP---FAVLSAEGMANERRPGGLNSSVMSW--DAGREVNTVQPVHDLLKEAYAVVS 1023
            G ++ A+  +E+  +  P   +A  N A  L        E A  LC  AL   PD A A YN N  LR  G  +EAIAL W ++   L A          L    +     S D            RA+ PS               +V  ED +      +E + DG   VTVVC++WG KYGP+YV +L   V R+       FVC TD+ + +     +   PLG    G W+GWW+K  LFS + +         R ++MDLDTVI GSL ++  +  P    A+L  + MANE+R GG NSS+M+W  D+  EV ++Q V+  L   +  V+
Sbjct:   81 GRRQDAIGLYEEILQTDPGCVEAQVNLAAQLAIADATRLEDALQLCEQALALRPDFAEAHYNRNMLLRRLGHQQEAIALYWGYLVRDLGANAIRETMPDELARAVLPFDDRSGD-----------RRADKPS---------------VVPSEDTTCN----QENNGDG---VTVVCVKWGVKYGPQYVNKLYNSVARHCGGLQMTFVCLTDNSDGIDLHGNLHILPLG----GGWKGWWNKCQLFSSDMSAKLRELGHSRCLFMDLDTVIVGSLVDLLAWTPPVGVLALLKTDEMANEQRAGGFNSSIMAWRNDSDDEVGSLQFVYSFLHSHFTAVT 380          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A225WYW7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYW7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.200e-33
Identity = 106/324 (32.72%), Postives = 149/324 (45.99%), Query Frame = 1
Query:   55 GEKEAALSSFEKAFELQPSLADAGANAAGLLI--QTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDH-RFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLA------GRVVYMDLDTVIAGSLDEIAGYA---GPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVH 990
            G +E A++ +++  +  P+  +A  N A  L        E A  LC  AL   PD A A YN N  LR  GR  EA+ + W  +   L A                    NS  G+ P        RA  P+  G +   +     ++ C     ++ S  +    DG   VTVVC++WGPKYG EYV RL   V R+  +    FVC TD+ EA+     +   PL       WRGWW+K  LFS   +         R +Y+DLDTVI G+L ++  ++   G   +L  + M NE+RPGG NSS+M W  G  +  V P+H
Sbjct:   78 GRREDAIALYQEILQTNPNCVEAQVNLAAQLAIADVRRLEEALELCMRALTLRPDLAEAHYNRNMLLRRLGRQSEAVNIYWDCLVRDLGA--------------------NSVKGSMPQE----LVRAVFPNDEGRVPRMD-----KLTCT---GSDTSCNQTSQDDG---VTVVCVKWGPKYGAEYVNRLFNSVMRHCGQVQVTFVCLTDNAEAIDLHENMKILPLDEG----WRGWWNKCQLFSSSISAKFRALGHSRCMYLDLDTVIVGNLVDLLMWSPALGVLTLLKTDQMTNEQRPGGFNSSIMVWHIG-SIEGVPPLH 361          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A6A3NKZ3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKZ3_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.510e-33
Identity = 110/337 (32.64%), Postives = 153/337 (45.40%), Query Frame = 1
Query:   55 GEKEAALSSFEKAFELQPSLADAGANAAGLLI--QTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRR-DHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLA------GRVVYMDLDTVIAGSLDEIAGYAGP---FAVLSAEGMANERRPGGLNSSVMSWD--AGREVNTVQPVHDLLKEAYAVVS 1023
            G ++AA+  +E+  +  P   +A  N A  L        + A  LC  AL   PD A A YN N  LR  GR +EA+A+ W  +   L A T        L    +     S +G           RA  PS               +V  ED +        Q +DG G V VVC++WG KYGPEYV +L   V R+       FVC TD+ + +     +   PL       W+GWW+K  LFS E +         R +YMDLDTVI GSL ++  +  P    A+L  + MANE+R GG NSS+M+W   +  E+  +Q V+  L   +  V+
Sbjct:   82 GRRQAAIGLYEEVLQADPECVEALINLAAQLAIADATRLQDALQLCEQALALRPDVAEAHYNRNMLLRRLGRQQEAVAMYWECLARDLGADTIRETMPDELARAVLPVDGQSREG-----------RAGKPS---------------VVPSEDTTCN------QASDGDG-VAVVCVKWGAKYGPEYVNKLYNSVTRHCGELQVTFVCLTDNSDGVDLHDNLRVLPLPDG----WKGWWNKCHLFSSEMSAKLRALGHSRCLYMDLDTVIVGSLVDLLAWTPPVGVLALLKTDEMANEQRAGGYNSSIMAWRNVSDEELGPLQFVYSFLHSHFTAVT 381          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: F0Y6H3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6H3_AURAN)

HSP 1 Score: 139 bits (349), Expect = 1.040e-32
Identity = 122/352 (34.66%), Postives = 159/352 (45.17%), Query Frame = 1
Query:    4 PFDPKAYYNHGVCIDALGEKEAALSSFEKAFELQPSLA---DAGANAAGLLIQTGEAERACTLCHLAL------DGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGP-FAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKE--AYAVVS 1023
            P D  A+YN G     LG+ + AL ++ +A       A    A ANAA L I+      A   C  AL       G    A ALYNLNTALR  G  R A+A +WR    RL                                SA A   + L +F  +         +      D  A  +AA++        +TV C++WG KY   Y   LA  VRR+L      VCYTDD   L +   V ARPL +    E   WW KA+LFS +  L GRV+Y+DLDTV+ G L  +A Y G   A+L  + +ANE R GG NSS+M W A      +  ++DL+ E  AYA +S
Sbjct:   57 PDDCVAWYNVGGAAAGLGDVDGALEAYARALAPHCGAALRSAARANAAALCIKGRRPAAAAEHCRAALADFDAAPGGDFPAHALYNLNTALRQVGDQRGAVAETWR----RL--------------------------------SAAAAPGSALRAFAAA---------RAAGAPRDPRAPVAAADDT-------LTVACVKWGTKYDAGYANTLARAVRRHLAVG-AVVCYTDDPSGL-DADVVEARPLPAGTALE--AWWLKAYLFSADAGLEGRVLYVDLDTVVCGPLAGLAAYGGDSVALLGTDDLANENRSGGYNSSLMVWTAP----ALSEIYDLVAEPGAYAALS 348          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A7S2SGH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGH1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.060e-32
Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  562 VTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSE-MPGVV--ARPLGSARCGEWRGWWHKAFLFSRETT----LAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAG 960
            V VVC++WG KYG EYV  LAAG+R +L   +R  C+TDD  +L+E + G++    PL        +GWW KAFLFS E      L  RV+Y+DLDT++ G L+E+AG   PF  L  +GMANERR GG NSSVM W  G
Sbjct:   67 VEVVCVKWGRKYGAEYVNALAAGLRGHLSVPYRVTCFTDDSSSLAEDVRGILFPEMPL--------QGWWLKAFLFSSEACSQLQLGSRVLYIDLDTIVVGPLEELAGLVVPFGTLGTDGMANERRTGGYNSSVMVWQNG 198          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A485LT11_9STRA (Aste57867_25131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT11_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.630e-32
Identity = 81/188 (43.09%), Postives = 110/188 (58.51%), Query Frame = 1
Query:  484 KRMVCVEDRSAEGSAAEEQDADGAGC-------VTVVCIRWGPKYGPEYVERLAAGVRRNLRR-DHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVS 1023
            KR+ C+ D S   S A+  D    G        VTVVC++WG KYGP+YV +L  GV + L   D  FVC TD+ + L  +P +  R L S     W GWW+KA LFS      GR++Y+DLDTVI GSL ++A Y G F  L  + M NERR GG+NSSVM W+AG    +++ ++  L+  + +VS
Sbjct:  150 KRIACLCD-SPRPSIAQLCDVLSDGRQPHDEPHVTVVCVKWGSKYGPDYVNKLYRGVAKYLSTVDFTFVCLTDNPDGL--LPEIETRALESG----WSGWWNKAQLFSPHFQWHGRMLYIDLDTVITGSLVDLALYDGAFGTLKTDEMQNERRVGGINSSVMCWNAGHP--SIEIIYMFLQRHFDIVS 328          
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Match: A0A7S2N911_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2N911_9DINO)

HSP 1 Score: 133 bits (335), Expect = 8.160e-32
Identity = 104/321 (32.40%), Postives = 141/321 (43.93%), Query Frame = 1
Query:   16 KAYYNHGVCIDALGEKEAALSSFEKAFELQPSLADAGANAAGLLIQTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWVRERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFCGSIGGFELEVGKR-----MVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYGPEYVERLAAGVRRNLRR-DHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAG-RVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDA 957
            +A +  G C+ +L  +E A  + ++A  L P++  A  N A +L+                               ALR   R  EAI L  R                                    H SA    +AE PS     GG ++    R     ++C E R           ADG     VVC++WG +Y  EYV RL  GVRR+L   +  F+C+TDD+E L E       P G         WW KA+LFS+E  L G RV+Y+DLD V+ GSLD++AG+ GPFAVL  + +A E   GG NSSVM+W+A
Sbjct:   38 RASFGLGTCLASLRRREEAEDALKRALRLSPNMVGAHINLASVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRSLNRQCEAIELVQR------------------------------------HISAARARQAE-PSRTSGGGGDDVGETLRPTRDLVLCQEWRPC---------ADGVAASAVVCVKWGQRYSSEYVNRLFEGVRRHLPTYEGSFICFTDDLEGLDERIEKRLLPDGLPL------WWGKAYLFSQEAGLDGLRVLYLDLDQVLVGSLDDLAGFRGPFAVLGTDDIACELASGGYNSSVMAWEA 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10214.351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSX1_ECTSI2.930e-26892.75TPR Domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5J8Y9_9PHAE3.150e-22492.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9Z1Y7_9STRA1.640e-3446.10Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
G4YEH6_PHYSP4.910e-3432.94Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225WYW7_9STRA1.200e-3332.72Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6A3NKZ3_9STRA2.510e-3332.64Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
F0Y6H3_AURAN1.040e-3234.66Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2SGH1_9STRA1.060e-3250.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A485LT11_9STRA2.630e-3243.09Aste57867_25131 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2N911_9DINO8.160e-3232.40Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10214contigEcto-sp8_S_contig10214:789..2584 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score738.0
Seed ortholog evalue2.4e-210
Seed eggNOG ortholog2880.D7FSX1
Model size1253
Hectar predicted targeting categoryother localisation
Exons3
EggNOG OGs2CN00@1,2QT19@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-27_006680.1
Cds size1251
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143119.7408288-CDS-Ecto-sp8_S_contig10214:788..9801681143119.7408288-CDS-Ecto-sp8_S_contig10214:788..980Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10214 789..980 +
1681143119.7512574-CDS-Ecto-sp8_S_contig10214:1170..17631681143119.7512574-CDS-Ecto-sp8_S_contig10214:1170..1763Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10214 1171..1763 +
1681143119.7601385-CDS-Ecto-sp8_S_contig10214:2117..25831681143119.7601385-CDS-Ecto-sp8_S_contig10214:2117..2583Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10214 2118..2583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10214.351.1prot_Ecto-sp8_S_contig10214.351.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10214 789..2583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10214.351.1

>prot_Ecto-sp8_S_contig10214.351.1 ID=prot_Ecto-sp8_S_contig10214.351.1|Name=mRNA_Ecto-sp8_S_contig10214.351.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=417bp
RPFDPKAYYNHGVCIDALGEKEAALSSFEKAFELQPSLADAGANAAGLLI
QTGEAERACTLCHLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWV
RERLPAGTPSYASAVSLEALAVASSSNSEDGANPHPSAVATTRAELPSFC
GSIGGFELEVGKRMVCVEDRSAEGSAAEEQDADGAGCVTVVCIRWGPKYG
PEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEW
RGWWHKAFLFSRETTLAGRVVYMDLDTVIAGSLDEIAGYAGPFAVLSAEG
MANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVSMPNQPRRRC
STLQSVPGRPVPPNSRTGPPALGVIRGHRSAPQNRVVYYVGKIQTKKRGP
DCCLEHFFCVYLQRLGG
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mRNA from alignment at Ecto-sp8_S_contig10214:789..2584+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10214.351.1 ID=mRNA_Ecto-sp8_S_contig10214.351.1|Name=mRNA_Ecto-sp8_S_contig10214.351.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1796bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10214:789..2584+ (Ectocarpus species8 EcLAC_412)
AGGCCGTTCGATCCTAAGGCGTACTACAATCATGGCGTTTGTATTGATGC CTTGGGGGAAAAGGAAGCGGCGCTCTCTAGCTTCGAGAAAGCTTTCGAGC TGCAACCGAGCTTGGCAGATGCTGGGGCGAACGCGGCCGGCCTGCTCATT CAAACTGGCGAAGCCGAGCGCGCCTGCACCCTCTGTCACCTCGTGAGTTT CTCGGGAACGGGGTGTTACCATAGTCACACACATTCCGCCACTTGTGCGA TAGATAACCTTGTGCTAGCATATGCTGATGCACTGTTGTTGCAGCCAAGC TGTCATATGCTTTGGCCGGCCCCTTCATTGAGCTAGAAAGAAACTGACAA GCTTGGTCGTTTGACTGGTTGACGTACGGCAGGCACTTGACGGGAACCCC GACTGCGCAGCCGCGTTGTACAATCTGAACACGGCTCTGCGAATGGCCGG GCGACCCAGGGAAGCGATCGCCTTGTCGTGGAGATGGGTCCGGGAACGGC TTCCCGCGGGCACCCCGAGTTACGCCTCGGCAGTCTCCTTGGAAGCCCTG GCCGTTGCATCCAGTAGCAACAGCGAAGACGGAGCTAATCCTCACCCTTC TGCTGTTGCAACGACGAGAGCGGAGCTGCCAAGTTTTTGTGGCTCGATAG GGGGCTTCGAATTGGAGGTCGGAAAGAGAATGGTCTGCGTTGAAGATCGC TCTGCTGAAGGTTCGGCAGCCGAAGAACAAGACGCGGACGGAGCGGGTTG TGTCACGGTTGTGTGCATTCGGTGGGGGCCCAAGTACGGGCCGGAATACG TGGAGAGACTGGCCGCGGGTGTACGACGAAACTTGCGGAGGGACCACCGC TTCGTGTGCTACACTGATGATGTGGAAGCGCTTAGCGAGATGCCTGGGGT GGTGGCAAGGCCGCTCGGTTCGGCTAGGTGTGGGGAGTGGCGAGGGTGGT GGCACAAGGCGTTCCTGTTCTCGAGGTGAATTCGGGTGGCGTTGTGACGA GCGACATACATCCGCGGTGCCAACGAGTGCCCGCAGTATTTTCACGAGGG GCAAGTAGGTGACGGCAGGATACGTTCGATTCTAGGTTTCAAGCCCCCGC TTTGGTGGCATTCGATAGACGTAAGGATCATAGGATCGGTCTCCTTGTTC GCTCGACTGCCTTGCTGCCCCTCACTCTCCGTATCATTGCCAGAATCACC CCCGAGGTGCCGCACATCCAACGCGCATTTGTTTTTCAAGTGTGGACATA CAGACGTTTTGATTTTCGGTTGCGTGAGTGAGTGTATTCTACGACCCTGA TTAAACCCTGGGACATGTTGCCGACACAGGGAGACGACATTGGCTGGACG AGTTGTGTACATGGACCTCGACACGGTTATCGCCGGCTCTTTGGATGAAA TCGCCGGCTATGCTGGTCCTTTTGCCGTCCTTTCTGCGGAGGGGATGGCA AACGAGCGCCGTCCAGGGGGATTGAACAGCTCGGTCATGTCTTGGGATGC TGGTAGGGAAGTGAATACCGTCCAACCAGTGCACGACCTGCTGAAAGAGG CATATGCGGTGGTGAGTATGCCAAATCAACCTCGTCGTCGTTGTTCCACA TTGCAATCCGTTCCGGGCCGCCCAGTCCCTCCAAACAGCCGTACCGGTCC ACCTGCCTTGGGTGTCATCCGTGGTCACCGGTCAGCACCCCAAAACAGGG TAGTGTACTATGTTGGAAAAATCCAAACGAAGAAACGGGGACCCGACTGC TGTCTTGAACATTTTTTTTGTGTCTATCTGCAGCGTCTGGGCGGAA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10214:789..2584+

>mRNA_Ecto-sp8_S_contig10214.351.1 ID=mRNA_Ecto-sp8_S_contig10214.351.1|Name=mRNA_Ecto-sp8_S_contig10214.351.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1251bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10214:789..2584+ (Ectocarpus species8 EcLAC_412)
AGGCCGTTCGATCCTAAGGCGTACTACAATCATGGCGTTTGTATTGATGC
CTTGGGGGAAAAGGAAGCGGCGCTCTCTAGCTTCGAGAAAGCTTTCGAGC
TGCAACCGAGCTTGGCAGATGCTGGGGCGAACGCGGCCGGCCTGCTCATT
CAAACTGGCGAAGCCGAGCGCGCCTGCACCCTCTGTCACCTCGCACTTGA
CGGGAACCCCGACTGCGCAGCCGCGTTGTACAATCTGAACACGGCTCTGC
GAATGGCCGGGCGACCCAGGGAAGCGATCGCCTTGTCGTGGAGATGGGTC
CGGGAACGGCTTCCCGCGGGCACCCCGAGTTACGCCTCGGCAGTCTCCTT
GGAAGCCCTGGCCGTTGCATCCAGTAGCAACAGCGAAGACGGAGCTAATC
CTCACCCTTCTGCTGTTGCAACGACGAGAGCGGAGCTGCCAAGTTTTTGT
GGCTCGATAGGGGGCTTCGAATTGGAGGTCGGAAAGAGAATGGTCTGCGT
TGAAGATCGCTCTGCTGAAGGTTCGGCAGCCGAAGAACAAGACGCGGACG
GAGCGGGTTGTGTCACGGTTGTGTGCATTCGGTGGGGGCCCAAGTACGGG
CCGGAATACGTGGAGAGACTGGCCGCGGGTGTACGACGAAACTTGCGGAG
GGACCACCGCTTCGTGTGCTACACTGATGATGTGGAAGCGCTTAGCGAGA
TGCCTGGGGTGGTGGCAAGGCCGCTCGGTTCGGCTAGGTGTGGGGAGTGG
CGAGGGTGGTGGCACAAGGCGTTCCTGTTCTCGAGGGAGACGACATTGGC
TGGACGAGTTGTGTACATGGACCTCGACACGGTTATCGCCGGCTCTTTGG
ATGAAATCGCCGGCTATGCTGGTCCTTTTGCCGTCCTTTCTGCGGAGGGG
ATGGCAAACGAGCGCCGTCCAGGGGGATTGAACAGCTCGGTCATGTCTTG
GGATGCTGGTAGGGAAGTGAATACCGTCCAACCAGTGCACGACCTGCTGA
AAGAGGCATATGCGGTGGTGAGTATGCCAAATCAACCTCGTCGTCGTTGT
TCCACATTGCAATCCGTTCCGGGCCGCCCAGTCCCTCCAAACAGCCGTAC
CGGTCCACCTGCCTTGGGTGTCATCCGTGGTCACCGGTCAGCACCCCAAA
ACAGGGTAGTGTACTATGTTGGAAAAATCCAAACGAAGAAACGGGGACCC
GACTGCTGTCTTGAACATTTTTTTTGTGTCTATCTGCAGCGTCTGGGCGG
A
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