mRNA_Ecto-sp8_S_contig9923.31782.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9923.31782.1
Unique NamemRNA_Ecto-sp8_S_contig9923.31782.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A6H5JL00_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL00_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.840e-119
Identity = 312/358 (87.15%), Postives = 313/358 (87.43%), Query Frame = 2 
Query:    2 QGMDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASAGTAADTVVGGKGTDVATAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFE---VFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 1060
            QGMDRLLIMLMMLYFV PEDTNTAVGPAAVAPKLT RT +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 ASAG  ADTVVGG GTDVATAAD     XXXXXXXXXXXXXXX     XXXXXXXXXX  AARG A LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPR TVRRIWDWWLSSGDFE   VFFRVSMALLELSEEHLLALD DGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL
Sbjct: 2150 QGMDRLLIMLMMLYFVPPEDTNTAVGPAAVAPKLTARTVQAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPSPASVNLDPPPTPTASAGIPADTVVGGTGTDVATAADAAGVRXXXXXXXXXXXXXXXVLAPSXXXXXXXXXX--AARGRAMLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRTTVRRIWDWWLSSGDFEASTVFFRVSMALLELSEEHLLALDVDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2505
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: D7G646_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G646_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 1.380e-112
Identity = 315/353 (89.24%), Postives = 315/353 (89.24%), Query Frame = 2 
Query:    2 QGMDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAGTAADTVVGGKGTDVATAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 1060
            QGMDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X     XXXXXXXASAG A DTVVGGKGTDVATAAD     XXXXXXXXXXXXXXXXX      XXXXXXXXXAARGGA LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSG RLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATV               FFRVSMALLELSEEHLLALDFDGTVEYFNNFPE SVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL
Sbjct: 1892 QGMDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSXASVNLXXXXXXXASAGNAPDTVVGGKGTDVATAADAAGVRXXXXXXXXXXXXXXXXXVLAPSSXXXXXXXXXAARGGATLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGSRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATV---------------FFRVSMALLELSEEHLLALDFDGTVEYFNNFPELSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2229
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A835Z6L5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6L5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.910e-34
Identity = 79/182 (43.41%), Postives = 112/182 (61.54%), Query Frame = 2 
Query:  509 GGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRP 1054
            GGAR  G  +Y +++ LFE +RL +LY  +  G+ VC EV   L   +LPALAAH   +DFS+D+V  GWFQTL   +  +P AT  R++DWWL+SG+  VFFR  +ALLEL+E+ LL  +FDG   +   FP+   +    ++ AA A+ +   ELM +E  VR   + +V    QL+LRP
Sbjct: 2045 GGARA-GRPIYELYASLFEAYRLKELYAVETAGIMVCVEVFLHLMAVKLPALAAHLADLDFSLDLVVFGWFQTLLCAV-PLPHATRARVFDWWLTSGELSVFFRAGLALLELNEDALLCREFDGVAHFLATFPDADGVDAMRVMRAAHALPLPAAELMMIEEAVRHVRRDQVALPQQLLLRP 2224
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7R9ZRK5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRK5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.440e-30
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 2 
Query:  521 LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 1000
            +L E V+ V    F  + L  +Y P+   + +C  V   L   +LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++L+PD+L+  A  ++V +  L  LE +V
Sbjct:   58 VLEETVFRVMDTFFTTYNLRHMYWPELRCLKICCRVFERLIQIKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHELEGMMTYLNTFPDATLLNPDILIACALNIKVTNSMLAELESEV 217
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S2U8X4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8X4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.450e-29
Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 2 
Query:  530 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 1000
            E V+ V       + L  +Y P+   +  C  V   L  R+LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+  A  ++V +  L+ +E++V
Sbjct:  181 ETVFRVMDAFMSRYNLRHMYWPELRCLKTCCRVFECLIQRKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHDLEGMMTYLNTFPDATLLNPDILIACALQIKVTNKMLLEMEMEV 337
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S2EQW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQW5_TRICV)

HSP 1 Score: 125 bits (313), Expect = 2.510e-27
Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 2 
Query:  503 ARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 1000
            AR  + ++ E V+ V       + L  +Y P+   +  C  V   +   +LP LA HFD  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++L+P++L+  A  +++ +  L  +E++V
Sbjct:  170 ARNHSLIVEETVFRVMDSFLTTYSLKHMYWPELRCLKTCCRVFERIIQLKLPVLADHFDHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPVLLNHELEGMMTYLNTFPDATLLNPEILIACALQIKITNRMLTDIEMEV 335
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S1FQF6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQF6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.220e-27
Identity = 58/160 (36.25%), Postives = 96/160 (60.00%), Query Frame = 2 
Query:  524 LGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVR 1003
            L E V+ +    F  + +  ++ P    + +C  +   L   +LP LA HF+  D ++ + A+GWFQTLF+Y+ +MP ATV  +WD W+    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+P A  ++V +  L  LE++ +
Sbjct:  288 LEETVFNLMDTFFVRYNVRHMFWPGLDCLKLCCRMFERLIALKLPVLADHFEHHDLNVGLFALGWFQTLFLYIPSMPSATVCHMWDIWIVERSFKIFFRVGTAILYLSQPILLNNDLEGMMIYLNTFPDATLLNPDILIPCALQIKVTNSMLTELEIECK 447
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S1D5P5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5P5_CYCTE)

HSP 1 Score: 122 bits (307), Expect = 3.800e-27
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 2 
Query:  530 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLE 991
            E V+ V       + L  +Y P+   +  C  V   +   +LP LA HFD  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+  A  +++ +  L  +E
Sbjct:  115 EAVFRVMDCFLTTYNLRHMYWPELRCLKTCCRVFERIIQLKLPVLADHFDHHELNVGLFALGWFQTLFLYLPSMPSATVCHLWDIWLVERSFKIFFRVGTAILFLSQPILLNHDLEGMMTYLNTFPDATLLNPDILIACALQIKITNKMLEDIE 268
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A6U3UDH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3UDH6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.490e-27
Identity = 60/159 (37.74%), Postives = 97/159 (61.01%), Query Frame = 2 
Query:  521 LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQ 997
            ++ E V+ V    F  + L  +Y P+   +  C  V  +L  ++LP LA HF+  D ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L  D+L+P A  +++ +  L+ +E++
Sbjct: 1040 IVEEVVFRVMDTFFTTYSLQHMYWPELRCLKTCCRVFEILIRQKLPVLADHFEHHDLNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPTLLNHDLEGMMTYLNTFPDATLLRADILIPCALQIKITNKMLVEIEME 1198
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A1Z5JKH4_FISSO (Rab-GAP TBC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH4_FISSO)

HSP 1 Score: 128 bits (322), Expect = 2.440e-26
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 2 
Query:  530 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 1000
            E ++ V    F  + L   Y P+   +  C  V   L   +LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++LSPD+L+  A  ++V +  LM LE +V
Sbjct: 1274 ETLFHVMESFFGTYNLRHFYYPELRCLKTCCRVFERLIQLKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHELEGMMSYLNTFPDATLLSPDILIACALQIKVTNKLLMELEREV 1430
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL00_9PHAE1.840e-11987.15Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7G646_ECTSI1.380e-11289.24Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z6L5_9STRA1.910e-3443.41RanBP2-type domain-containing protein n=1 Tax=Trib... [more]
A0A7R9ZRK5_9STRA7.440e-3038.75Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2U8X4_9STRA1.450e-2938.85Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2EQW5_TRICV2.510e-2735.54Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1FQF6_9STRA3.220e-2736.25Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1D5P5_CYCTE3.800e-2737.66Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6U3UDH6_9STRA5.490e-2737.74Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JKH4_FISSO2.440e-2639.49Rab-GAP TBC domain-containing protein n=1 Tax=Fist... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9923contigEcto-sp8_S_contig9923:1024..6812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score392.1
Seed ortholog evalue2.7e-106
Seed eggNOG ortholog2880.D7G646
Model size2991
KEGG koko:K17902,ko:K18341,ko:K20242
KEGG Pathwayko04152,ko04919,ko04931,map04152,map04919,map04931
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.regulation of vesicle fusion
EggNOG OGsKOG4436@1,KOG4436@2759
Cds size1056
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9923.31782.1prot_Ecto-sp8_S_contig9923.31782.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9923 2952..6805 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145361.6230583-UTR-Ecto-sp8_S_contig9923:1023..29511681145361.6230583-UTR-Ecto-sp8_S_contig9923:1023..2951Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9923 1024..2951 -
1681145361.7227612-UTR-Ecto-sp8_S_contig9923:6805..68121681145361.7227612-UTR-Ecto-sp8_S_contig9923:6805..6812Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9923 6806..6812 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145361.6395621-CDS-Ecto-sp8_S_contig9923:2951..30171681145361.6395621-CDS-Ecto-sp8_S_contig9923:2951..3017Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 2952..3017 -
1681145361.6495686-CDS-Ecto-sp8_S_contig9923:4026..41351681145361.6495686-CDS-Ecto-sp8_S_contig9923:4026..4135Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 4027..4135 -
1681145361.6598775-CDS-Ecto-sp8_S_contig9923:4658..47381681145361.6598775-CDS-Ecto-sp8_S_contig9923:4658..4738Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 4659..4738 -
1681145361.672447-CDS-Ecto-sp8_S_contig9923:5173..52781681145361.672447-CDS-Ecto-sp8_S_contig9923:5173..5278Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 5174..5278 -
1681145361.688818-CDS-Ecto-sp8_S_contig9923:5586..56641681145361.688818-CDS-Ecto-sp8_S_contig9923:5586..5664Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 5587..5664 -
1681145361.7099917-CDS-Ecto-sp8_S_contig9923:6187..68051681145361.7099917-CDS-Ecto-sp8_S_contig9923:6187..6805Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9923 6188..6805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9923.31782.1

>prot_Ecto-sp8_S_contig9923.31782.1 ID=prot_Ecto-sp8_S_contig9923.31782.1|Name=mRNA_Ecto-sp8_S_contig9923.31782.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=352bp
MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEAAAAAAAPAAPL
LSSSGARARENAAAAGGSGSGELLLVVDKDAAGDDDDGAPSPASVNLDPP
PTPTASAGTAADTVVGGKGTDVATAADAAGARGSENALPTPPPAPPSPAV
LAPSSASPPTPPRPAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGG
VFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPR
ATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFP
EPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPV
L*
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mRNA from alignment at Ecto-sp8_S_contig9923:1024..6812-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9923.31782.1 ID=mRNA_Ecto-sp8_S_contig9923.31782.1|Name=mRNA_Ecto-sp8_S_contig9923.31782.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5789bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9923:1024..6812- (Ectocarpus species8 EcLAC_412)
TCAGGGCATGGACCGCTTGCTCATCATGCTGATGATGCTCTACTTCGTCT
CGCCCGAAGACACCAACACCGCCGTGGGCCCCGCGGCTGTCGCACCCAAG
CTCACCACGAGAACCGCAGAAGCCGCAGCAGCAGCCGCAGCGCCGGCGGC
GCCGCTGCTATCATCGAGCGGCGCCCGAGCGAGAGAGAACGCCGCCGCCG
CGGGCGGTAGCGGCAGCGGTGAGCTGTTGCTGGTGGTCGACAAAGACGCG
GCTGGTGACGACGACGACGGAGCCCCGTCCCCGGCTTCCGTAAACCTAGA
TCCCCCTCCAACCCCGACGGCCTCCGCTGGGACCGCCGCCGATACCGTAG
TAGGCGGGAAGGGTACGGACGTCGCCACGGCCGCCGACGCCGCCGGGGCC
CGGGGTTCCGAGAATGCGCTGCCGACGCCGCCGCCGGCCCCCCCATCCCC
TGCTGTCTTGGCCCCGTCTTCCGCGTCGCCGCCGACGCCCCCACGGCCGG
CGGCTCGGGGCGGGGCAAGGCTGCTGGGAGAACGGGTGTACGCGGTGTTT
TCCGGCCTGTTCGAAGGGTTTCGGCTGCACGACCTCTACGTGCCGGACAG
GGGTGGGGTGTTCGTCTGCACGGAGGTGAGTATTTGGTCTCGTACTGATC
GACGCCGGTCGGGAGATCGCCCGCTTATTTTGCGTGGTTATGCGCTGTGT
TTCTGGTCATGTTTTTTTGTTCTTTTTTTGTCTCGTTTTGGGGTGCACAC
GGGCGGGGTGGGGAACGCACCTGCTTTTAAGTTTCTCGTGGGTGATGTGT
GCGCAAACGGAGGGAGTTTGTTTCTCACGTGTTTGTGTCACCGGCTTGCA
AGACGAGGATTGGAAATCTCATTCTTCATCGCTCGGTGTCTCCGTTCTCT
CTGTGGCGTGCCCTCTCTCGGTGTCATGCCCCCTCTTCTCGCCGTTAAGA
GCGCGCCGCCGACTACCCTCCCCCCCCCCCCATTGTTTATTCACGTGTTT
ATGAGAGCTCTTTTGCTAGCTGCACCGAACGTGGGGAACAAAACCAACCG
TGCTTTCCCCCCATGTCGTATACTTCATAGCTTGCTCTGCTCCGCGCTCG
GATTTTCATGCCGTTTGCTTTTTTTTGTTCTTGTTTTTTCTTGAACAGGT
GCTGACTCTTCTTTCGGGGCGTCGCCTACCCGCGCTGGCCGCCCACTTCG
ATAGCATCGACTTTTCCATCGACATGGTAAGCGCAGCGCTCGAACACAAA
CACCCTACGCGAGGCACGAACAACAGAAACCTCCGGTCGCATACAGCCGT
CCCCAAACATGCGGAAACGCATCGGCCGGCGGCAACAACGTCGGGAAACG
CATCGGCCGGCGGCAACAACGTCGGGGTCACAATAACACGCATGTATTTT
CGCGGCCAACGTTTGGTGGTCGAGGATTGAGCGCACTTCAACAGCGGCAG
GATAGTTGTCGTCGATGCTGTCGTCGCCGTTGATGATGTTTCTTGCGCCG
CCCCGGCCTTGGTGCCTGCGTCGTTTGGTACAAGGTGGCGATGGGTTGGT
TCCAGACCCTCTTCGTGTACCTGCACGCCATGCCGCGAGCAACGGTGAGG
CGCATCTGGGACTGGTGGCTATCCTCGGGAGACTTCGAGGCGAGTACAGT
ACTCATATACAATGCCGTGGAAAGGGGCGCTGTTTAGTGCGAGTATATTG
TATGCCCAGAGAATAGACCGGCACTACAATATATTGTACCGGACACCGGT
GCTAATCAAAGTACAGAATGACTTGGCGATCCAGTTTGTGCCAGATATCC
CGAGCAACGGCACCATTCAGCCCGCACTAAACACCTCCCCACACTGCTTG
TAGAATTAGTAGAAGTGTATTTTTAATTTGATGGATTTTGTGACGTCGCT
CTCGCTGTCGCCGTTCGGCGAGACGACACCTGGCAGAAAACGCCGAAACA
GGGTGTTGTGTGTGATGCCATGCGTTAGGTCCGTGTTGCTCTGCCCTGTC
TCCAACTGCCTCGCTGTTTTTGTTGCCTCTTGGATCGTGATGGTTTTGTG
CATCTGTGTACCCCCCCCTTTCAGGTATTTTTCCGTGTTTCGATGGCGCT
GCTGGAGCTGAGCGAGGAGCACCTTCTTGCTCTCGATTTTGACGGGACCG
TGGAGTGAGTTATCACACACACGAAGAGGGAGGGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCAAACACACGGGG
CAAACGCTTGCGAGGGCGACGTTTTTGTTCGCGTACTTCATCAAAGCCGC
AGCAGTGCAAATGCCTCGTGCGCTGCTACAGCAGTAGTCCGGACCGCATC
TTTCGTTGGCGATGTTCAAAGAGTTAGTTATCCCTACCGTCACCGAGAAG
AGACAACGTCTGCGGCGAGAGACGGCATCCGCCTAAAGACGGCGTCCGCG
TGCTGTGGACGAAAAATACAGATTTCTCGTCATTCATGCTAATTTATCCG
CGGTACCGTTTTGTCGTCCGTCCGTTGCAAGACAAGTTTTTTTTTTTTTT
TTTCCAGGAAGGACCACAAATCATGCCGTGCCGTGCCGTTCGTACGCGGG
GATCAGCCTGTCTAGGTTATTGTTTTTCACTTATCTCTCTCTCTCTCTCT
CTCTCTCTTTCTCTCTCTTTTTCCCAGGTACTTCAACAACTTCCCGGAGC
CGAGCGTGCTGTCGCCGGACGTCCTTCTCCCCGCGGCCGCCGCCGTGGAG
GTGGAGGATGGGGAGCTAATGTATTTGGAGCTGCAGGTGCGGAGGTTTCC
TTCGTTATTCTGGTTGTTGCGTGTTGGGGCTTGGGGTTGGATGTCGATCT
CTTGTCCGAGGCTGGAGGTTGGTTGCCCCGGGGCGTGAATTTGTGATTGT
ATTGGTTAACACACTGCGCGGAGAATGAGTAACTATTGGATGTCCTGCGT
GCGTTCAACGGGGAAAATTAAGCAACGATCAAGCATCGAAAGAGGGTCTG
TCTGCAGCCTGAGCTCCCTCGTACTTCGAACGTACAAGAAACCAAACGTG
GGGCTGATGACGCGGCCAGATAAGATCATTGCTTTGCAATGTCGCTACCG
CTGCTGCGGCTGCTGGCGTGCTGCTGCTCCTGCTGTTATCTCTCTAGGTG
TATGCATCTTTTCCTCTCTGTCTCTTTCTCTCTCTCTCTTTCTCTTTATG
TGTGTTGTTCAGCAGCGTCGACCGCTGCAAGCAAATCGTTGATGCACCGA
CCCCTCATCTCCAGCGGCGACGTCTCGTTTTCTTGTCCGGGTCTAGTTTC
GTTTCGTGTTTGGTCAATTCTTGCCCCGTTGCAATTGCCGAGGCCCTTCA
TAGGCCTGCCGTGTCTACAGTAGCACAAGGTAGCGCCAATCCTGGCGAGG
CTGTGAGCAAAATCCAAGGACCGAGTTATTGTGACAAAAAACCAACAACC
ATTGTTTGTTAGTTTTTGTTTCGACCGGCTGTGGGCGGCACAGTAATCGT
TTTTCTCCTCCATGCCCTTCCTGACGAGTTCGGTGAACCTAGGACCTATC
TGGGCAGACAGAGCTCATCCCTGAAAACTACGTGTGGTAACATGTTTTTT
GTCGCCCATCTTGACCATTTTTCGTACATTTTTTTTTAATTCTTTTATGA
TTTCATGCCCTTCCCCCCGTAGCTTGGTTGGACCTATTCGCGCGGACAAC
TCTCGTCGTTATCCCTGAGATTTAACTCTACGTGTGGTAACATGTTTATT
CACTCCCGCTGTTCTTTTCCCGCACACTTGCTTGTTTCAATACAGGTGCG
GCAAAGGGAAAAGCTGGAGGTACCGTCGGTTACCCAACTCATGCTGCGCC
CGGTGCTGTGATCCATTGCTGCCCCGGTCCGCGGACGCCCTCCCGTTTCT
TCCCAACAGCTCCACCTTGGTTGATCGTTCCGCGTCATACCTACTGACTG
CTTTGCAGCGCCGCGGGACGAGGTTGAGACGTGAAGGAGATTATTTTGCC
GGGTTTTCGTTCACATAAGATGAACAACACTCGAATAAATTACGGGCGGT
GCGTGGCCCACTTGCCTCTTTTTTTTAGCTTAGGTCTTGCGCAGGGCGCA
CCCTTACGTCGTCGCAGCAGCGTTTTTAGGTGTTGCGTTGTTTTCGTGGG
AGGCGTGTTTTTGCGGGGTGTGGGGTTCGGTTCGGTTTCTGCGTCGTGTT
CGGGGAGTGGGTGTGGGTCCCACGCTTGGAGACGAAATGGATGAGGGGCC
GCGATCATCGAGTTTTTCGGTGTTTTGTGGAGGTCGGTGCATGTGGCACT
CATATCGTGTGGTTCTTTGTGTGTGTCTGTTGGTCGCATTGCTGCTGCTC
CTGTCTGTGGTTTTCCGCTCAGAGCGCATGAGAGGCTCGCCCAAGGGGTT
TTACAGAGCGGTTCGGGGAGTCGAAAAGCTGTTTGTTGATGTTGGCCAGG
GTTCGAAAAGGTAGAATTTTGAGCATGTTTTGAACGCAATTTTTGCTGCC
ATGTGTGCTCCACACCCGATGACGCGTAGTTTCTACGGGATGTAGTCACT
CTCCGTGCGTTCGTTTTGACTTGTTTTTTTCTCGAGGTATTTCTGTGAAT
GATTGCTGAAATTTGTTTTTTTCGGTATTGTTTGACCATGCAACACGTCG
TTTGCTTCCTATTCTCCTTTGTAGGCGGTTGGGGGGGGGGGAGAGAGAGA
AAGGGAGACAAGACGACTAAAAACGACAGTGCTGTGAAGAGGGAAATAAT
GAGGCGGTCGGTGGTGGTGGTATGTATCCCTGGTTCATCTTCAGAAGAGT
TTGTAGTTTTTTCGCTTTTTTTTGTTTCGTGAACATATGTTAAGAATTTT
GTTTGGGTGATAGAAAATCGCACATTGAGGGCGAGGCAACGGCGCTGATG
TCGGCGCGCGTGTTTTGCCGAACGACGTGCTGCTGTCTGGCTGTTCGACA
GCACTGAGGAAAGTGTGACGTTAGCAAGCACTGAAGGAAGTGCGTAAGTC
CATGTGCGCGGGTTGGCTGTACTCGATGTGAGGTGCTGCTGCTCTGGCTG
TGTAAGTACGTAGAGCATGCCTTGGGGAATGAGTGTGGGCGATTGTTGTG
GGGTTACGTCTGATTCATGCTGTTTGTTTGATTCGAGGCCATAGTTGGGA
GGCGTATCTTGAGTTTTTTTCTTTTCACGTCTTGGCCCGTCAACGGTGCC
TGTTATTTGTTGTAAGATTCGTTTGGTATGCGACAGCACGCAGCCGATGC
GATAGAAGTTTGTCATGGGCACACGGAAAGCGCGGTGACTTCGAACGGGC
ACACGTTGATGTCTGGATAGCATACATACACAGTCTAGTGCTGTACGTAT
AGAGGCTGTTTGGTCGTGGTGCTTGAAAATCGCGTTCCATATTTTGGGGT
ATGAGTACTGAGAGCGTGCAGGTTTGATTGACCCAAAGCTGTATACGCCG
AGGCTGCTGTGTGTCGGAGATGTTTCAGAACGTGCGGGTCCTTTTGAGAA
ATATGGGAGCTTTCAAGGAGAGCCCGTCGACGCGACTGTGTGGCATCGCA
TGATGACGGTTGTGGTGTACGTTCAGTACTTTTCACAGATCGCGTCAGCC
GGTTGGCCGATGAACATCGACCAAGCTTTTGTGAATGACTTTCAACCGCC
GTCGAAGGCGTTGTACCTGGCGGACCATCGACCGTCCGAAAGTCCCAGTA
GGACGAAATAGACCCAGACCTCTGCTGCCCGTGAGTTTCCATGGCAGAAG
GGAGTGTCGTAACGCGTTGTGTGAGCAAGAGTCTGTTCA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9923:1024..6812-

>mRNA_Ecto-sp8_S_contig9923.31782.1 ID=mRNA_Ecto-sp8_S_contig9923.31782.1|Name=mRNA_Ecto-sp8_S_contig9923.31782.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9923:1024..6812- (Ectocarpus species8 EcLAC_412)
ATGGACCGCTTGCTCATCATGCTGATGATGCTCTACTTCGTCTCGCCCGA
AGACACCAACACCGCCGTGGGCCCCGCGGCTGTCGCACCCAAGCTCACCA
CGAGAACCGCAGAAGCCGCAGCAGCAGCCGCAGCGCCGGCGGCGCCGCTG
CTATCATCGAGCGGCGCCCGAGCGAGAGAGAACGCCGCCGCCGCGGGCGG
TAGCGGCAGCGGTGAGCTGTTGCTGGTGGTCGACAAAGACGCGGCTGGTG
ACGACGACGACGGAGCCCCGTCCCCGGCTTCCGTAAACCTAGATCCCCCT
CCAACCCCGACGGCCTCCGCTGGGACCGCCGCCGATACCGTAGTAGGCGG
GAAGGGTACGGACGTCGCCACGGCCGCCGACGCCGCCGGGGCCCGGGGTT
CCGAGAATGCGCTGCCGACGCCGCCGCCGGCCCCCCCATCCCCTGCTGTC
TTGGCCCCGTCTTCCGCGTCGCCGCCGACGCCCCCACGGCCGGCGGCTCG
GGGCGGGGCAAGGCTGCTGGGAGAACGGGTGTACGCGGTGTTTTCCGGCC
TGTTCGAAGGGTTTCGGCTGCACGACCTCTACGTGCCGGACAGGGGTGGG
GTGTTCGTCTGCACGGAGGTGCTGACTCTTCTTTCGGGGCGTCGCCTACC
CGCGCTGGCCGCCCACTTCGATAGCATCGACTTTTCCATCGACATGGTGG
CGATGGGTTGGTTCCAGACCCTCTTCGTGTACCTGCACGCCATGCCGCGA
GCAACGGTGAGGCGCATCTGGGACTGGTGGCTATCCTCGGGAGACTTCGA
GGTATTTTTCCGTGTTTCGATGGCGCTGCTGGAGCTGAGCGAGGAGCACC
TTCTTGCTCTCGATTTTGACGGGACCGTGGAGTACTTCAACAACTTCCCG
GAGCCGAGCGTGCTGTCGCCGGACGTCCTTCTCCCCGCGGCCGCCGCCGT
GGAGGTGGAGGATGGGGAGCTAATGTATTTGGAGCTGCAGGTGCGGCAAA
GGGAAAAGCTGGAGGTACCGTCGGTTACCCAACTCATGCTGCGCCCGGTG
CTGTGA
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