prot_Ecto-sp8_S_contig9918.31773.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9918.31773.1
Unique Nameprot_Ecto-sp8_S_contig9918.31773.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length310
Homology
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 1.460e-197
Identity = 287/305 (94.10%), Postives = 291/305 (95.41%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHV 305
            MDNHVLLVNKPAGLLSQSDRTGD DVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARD VEKIYHAVVAG L GRGIRQD LVSPDASGAVARRGRGPRTGLSS P RGGAGGRLLAAGPTSS +GKLAQLEWEAIDVSPSSA RLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWC SR GDATDESAVPPPR AG MEPLEDRSILLHASELIVPHPTR+GA VRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARG+H+
Sbjct:   49 MDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGAGGRLLAAGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPR-AGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGEHL 352          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 2.300e-159
Identity = 236/250 (94.40%), Postives = 239/250 (95.60%), Query Frame = 0
Query:   60 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHVDVTI 309
            MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSL GRGIRQDLLVSPDASGAVARRGRGPR GLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAI+VS SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS     R GDATDESAVPPPRRAGR+EPLEDRSILLHASELIVPHPTR+GATVRAVAAPPGMWSDLCGRSCIDEVFGDQP TGSVVECARGDH DVTI
Sbjct:    1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS-----RGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPATGSVVECARGDHFDVTI 245          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78)

HSP 1 Score: 157 bits (397), Expect = 3.040e-43
Identity = 110/274 (40.15%), Postives = 137/274 (50.00%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
            +DNH+L+VNKP GLL+Q+D TGD DV  L + +++    K G  F+ LVHRLDRP SGVM +ARTSKAAARLS  FR R   EK Y A+V G  TG G   D LV                             GR +   P + P  + A+L W  +  +   A RL         +LV VRL TGR HQ+RVQLA  GHP++GD RYG S                          PL+ R++ LHA  L + HPTR    +  VA PP  W
Sbjct:    8 LDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLVKA---------------------------GRTVRVVPATHPGARRAELAWRVL--ATDEAERL---------SLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGAS-------------------------RPLDGRNLALHAYRLGIEHPTRR-VPMHWVAPPPAAW 216          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT)

HSP 1 Score: 152 bits (385), Expect = 1.760e-41
Identity = 106/271 (39.11%), Postives = 134/271 (49.45%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPP 271
            +DNH+L+VNKP G+L+Q+D TGD DV  L + Y++    K G  F+ LVHRLDRP SGVM +ARTSKAAARLS  FR R   EK Y A+V G+  G G   D L+                             GR +   P + P GK A+L W  +     S  R+         +LV VRL TGR HQIRVQLA  GHP++GD RYG                           +P + R++ LH+  L + HPTR  A    V  PP
Sbjct:    8 LDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKV---------------------------GRTVRVVPATHPGGKRAELAWRVL----GSDGRV---------SLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRYGAR-------------------------QPFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP 212          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 150 bits (378), Expect = 1.730e-40
Identity = 110/274 (40.15%), Postives = 144/274 (52.55%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
            +DNH+L+V KP GLL+Q+DRTGD D+    + +++   +K G  F+ LVHRLDRPVSGVM +ARTSKAA RLS +FR R  VEK Y A+V G ++G G R+D L+  D  G V                      R+++A     P GK A L W+A+        RL         +LV V+L+TGR HQ+RVQLA +G P++GD RYG           AT E              L+ R++ LHA  L   HP R    V   A PP  W
Sbjct:    6 LDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKED--GRV----------------------RIVSA---DHPKGKRAVLRWQAL----GEEGRL---------SLVEVKLLTGRAHQVRVQLAALGTPILGDFRYG-----------ATRE--------------LDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 147 bits (370), Expect = 3.830e-39
Identity = 107/275 (38.91%), Postives = 136/275 (49.45%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
            +DNH+L+V KPAG+LSQ+D TGD+DV   A++++R   +K G  F  LVHRLDRPV G M +ARTSKAA+RL+  FR R   EK Y A+V G L G G   D L+            R P+ G      R G  G             K A + W +  V                R+LV V L TGR HQIRVQL+ +GHP+VGD RYG  +                         PL D R I LHA+ L + HPT+        +APP +W
Sbjct:    8 LDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----------RDPKRGTRVKRVRQGTDGA------------KRAVMTWTSRSVL-------------GTRSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGAEA-------------------------PLGDGRGIALHATHLTIEHPTKRDRRT-FTSAPPRVW 220          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT)

HSP 1 Score: 145 bits (366), Expect = 1.270e-38
Identity = 108/283 (38.16%), Postives = 141/283 (49.82%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSP-----SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRLGATVRAVAAPPGMWSDL 277
            +DNH+L V+KP GLL+Q+DRTGD D+ +LA+ Y++   +K G  FV LVHRLDRP SGVM +ARTSKAA+RLS  FR R   +K Y AVV G     G   + + + D                     +GG G                      ++DV P      +A+R R     + R+LV V L+TGRKHQIR QLAE+G P++GD RYG  +                         P  D R + LHA  L+V HPT+    V  VA PP  W+ L
Sbjct:    6 LDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAID---------------------KGGGG----------------------SVDVVPVGEGQRAALRYRTLARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQT-------------------------PFADGRGVALHAYRLVVEHPTKR-EPVTVVAPPPEAWAGL 218          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT)

HSP 1 Score: 145 bits (366), Expect = 1.670e-38
Identity = 115/294 (39.12%), Postives = 143/294 (48.64%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTG 294
            +DNH+L+VNKPAGL SQ DR+G   V +L +  ++   NK G  ++ LVHRLD PVSGVM +ARTSKAAARL   FR R  VEKIY A+V G L G G+ +D +                       PAR     RL++A     P GK A L WEA+              T N  TLVR+   TGRKHQIRVQLA  G+PV+GD RY    W                         L    + LHA +L V HPTR    ++  A  P  W D   R  +D +      +G
Sbjct:   12 LDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERT-VEKIYLALVEGELEGEGVWEDFI----------------------APARDHM--RLVSA---DHPWGKRAVLRWEAL-------------MTRNGLTLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYRARRW-------------------------LAPGQMALHAWKLSVTHPTRR-ERMQWTAPVPSCW-DSAFRLKVDRLLAYLEASG 237          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: UPI001BBF82E8 (RNA pseudouridine synthase n=1 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBF82E8)

HSP 1 Score: 143 bits (360), Expect = 1.690e-37
Identity = 117/276 (42.39%), Postives = 142/276 (51.45%), Query Frame = 0
Query:    2 DNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGM-WSD 276
            DNH+L + KPAGLL Q DRTGDV +  L +++++V   K G+ F+A+VHRLDRPV+GV+  ARTSKAAARLSA FR R  VEK Y AVVAG L G   R   LV       + RR R  R     VPA            PT  P  + A+L +  +                + RTL++V L TGR+HQIR+QLA  GHP++GD RYG                       AG  EPL  R I L A  L V HPTR    V     P G  W D
Sbjct:   13 DNHLLALYKPAGLLVQGDRTGDVSLLELGKQWLKVRYAKPGQVFLAMVHRLDRPVAGVVLFARTSKAAARLSAQFRERR-VEKRYLAVVAGRLGGESGR---LVDH-----IERRDRRSRV----VPA------------PT--PQSQAARLRYTVLA-------------RDDRRTLLQVDLETGRRHQIRIQLAHAGHPLLGDLRYG-----------------------AG--EPLPGRQIALLAHVLCVDHPTRDERLVFTCPIPCGWPWPD 223          
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A271JHQ2_9BACT (PseudoU_synth_2 domain-containing protein n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271JHQ2_9BACT)

HSP 1 Score: 142 bits (359), Expect = 1.920e-37
Identity = 112/274 (40.88%), Postives = 138/274 (50.36%), Query Frame = 0
Query:    1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
            +DNH+L+VNKPAG+LSQ D+TGD D+  LA+ Y++   +K G  FV LVHRLDRP SGV+ +ARTSKAAARLS  F+ R   +K Y AV+ G L   G   D +   D                  +  R G G R++  G T S   K A+L             R+R       R+LV V L+TGR+HQIR QLA  G  V+GD RYGR                 P P   G         I LHA  L V HPTR  A +  VA PP  W
Sbjct:   18 LDNHLLVVNKPAGMLSQEDKTGDPDLVTLAKAYLKERFDKPGNVFVGLVHRLDRPTSGVVVLARTSKAAARLSRQFQQRGP-DKTYLAVLDGRL---GDSPDWMELEDG-----------------ILERDGGGVRVVPVGSTGS---KAARL-------------RVRMLAADGTRSLVEVELLTGRRHQIRAQLAARGASVLGDFRYGR-----------------PTPFADGH-------GIALHAVRLTVEHPTRKEA-MTFVAKPPVSW 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE1.460e-19794.10PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI2.300e-15994.4023S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
UPI001420CA783.040e-4340.15RNA pseudouridine synthase n=1 Tax=Rhodocaloribact... [more]
A0A3M1NPK6_9BACT1.760e-4139.11RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]
A0A848XZP8_9BACT1.730e-4040.15RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A800M4B4_9BACT3.830e-3938.91RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A271J2Z8_9BACT1.270e-3838.16PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A1M6P7L7_9BACT1.670e-3839.12Ribosomal large subunit pseudouridine synthase D n... [more]
UPI001BBF82E81.690e-3742.39RNA pseudouridine synthase n=1 Tax=Desulfosarcina ... [more]
A0A271JHQ2_9BACT1.920e-3740.88PseudoU_synth_2 domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 4..197
e-value: 4.8E-27
score: 95.0
NoneNo IPR availableGENE3D3.30.2350.10coord: 1..268
e-value: 2.1E-44
score: 153.6
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 2..271
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 2..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9918contigEcto-sp8_S_contig9918:15..1858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9918.31773.1mRNA_Ecto-sp8_S_contig9918.31773.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9918 3..1858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9918.31773.1 ID=prot_Ecto-sp8_S_contig9918.31773.1|Name=mRNA_Ecto-sp8_S_contig9918.31773.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=310bp
MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVH
RLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIR
QDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKL
AQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMG
HPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHAS
ELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECA
RGDHVDVTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf