prot_Ecto-sp8_S_contig9918.31773.1 (polypeptide) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE) HSP 1 Score: 554 bits (1427), Expect = 1.460e-197 Identity = 287/305 (94.10%), Postives = 291/305 (95.41%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHV 305
MDNHVLLVNKPAGLLSQSDRTGD DVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARD VEKIYHAVVAG L GRGIRQD LVSPDASGAVARRGRGPRTGLSS P RGGAGGRLLAAGPTSS +GKLAQLEWEAIDVSPSSA RLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWC SR GDATDESAVPPPR AG MEPLEDRSILLHASELIVPHPTR+GA VRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARG+H+
Sbjct: 49 MDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGAGGRLLAAGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPR-AGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGEHL 352
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 2.300e-159 Identity = 236/250 (94.40%), Postives = 239/250 (95.60%), Query Frame = 0
Query: 60 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTGSVVECARGDHVDVTI 309
MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSL GRGIRQDLLVSPDASGAVARRGRGPR GLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAI+VS SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS R GDATDESAVPPPRRAGR+EPLEDRSILLHASELIVPHPTR+GATVRAVAAPPGMWSDLCGRSCIDEVFGDQP TGSVVECARGDH DVTI
Sbjct: 1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRS-----RGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPATGSVVECARGDHFDVTI 245
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78) HSP 1 Score: 157 bits (397), Expect = 3.040e-43 Identity = 110/274 (40.15%), Postives = 137/274 (50.00%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
+DNH+L+VNKP GLL+Q+D TGD DV L + +++ K G F+ LVHRLDRP SGVM +ARTSKAAARLS FR R EK Y A+V G TG G D LV GR + P + P + A+L W + + A RL +LV VRL TGR HQ+RVQLA GHP++GD RYG S PL+ R++ LHA L + HPTR + VA PP W
Sbjct: 8 LDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLVKA---------------------------GRTVRVVPATHPGARRAELAWRVL--ATDEAERL---------SLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGAS-------------------------RPLDGRNLALHAYRLGIEHPTRR-VPMHWVAPPPAAW 216
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT) HSP 1 Score: 152 bits (385), Expect = 1.760e-41 Identity = 106/271 (39.11%), Postives = 134/271 (49.45%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPP 271
+DNH+L+VNKP G+L+Q+D TGD DV L + Y++ K G F+ LVHRLDRP SGVM +ARTSKAAARLS FR R EK Y A+V G+ G G D L+ GR + P + P GK A+L W + S R+ +LV VRL TGR HQIRVQLA GHP++GD RYG +P + R++ LH+ L + HPTR A V PP
Sbjct: 8 LDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKV---------------------------GRTVRVVPATHPGGKRAELAWRVL----GSDGRV---------SLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRYGAR-------------------------QPFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP 212
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT) HSP 1 Score: 150 bits (378), Expect = 1.730e-40 Identity = 110/274 (40.15%), Postives = 144/274 (52.55%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
+DNH+L+V KP GLL+Q+DRTGD D+ + +++ +K G F+ LVHRLDRPVSGVM +ARTSKAA RLS +FR R VEK Y A+V G ++G G R+D L+ D G V R+++A P GK A L W+A+ RL +LV V+L+TGR HQ+RVQLA +G P++GD RYG AT E L+ R++ LHA L HP R V A PP W
Sbjct: 6 LDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKED--GRV----------------------RIVSA---DHPKGKRAVLRWQAL----GEEGRL---------SLVEVKLLTGRAHQVRVQLAALGTPILGDFRYG-----------ATRE--------------LDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT) HSP 1 Score: 147 bits (370), Expect = 3.830e-39 Identity = 107/275 (38.91%), Postives = 136/275 (49.45%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
+DNH+L+V KPAG+LSQ+D TGD+DV A++++R +K G F LVHRLDRPV G M +ARTSKAA+RL+ FR R EK Y A+V G L G G D L+ R P+ G R G G K A + W + V R+LV V L TGR HQIRVQL+ +GHP+VGD RYG + PL D R I LHA+ L + HPT+ +APP +W
Sbjct: 8 LDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----------RDPKRGTRVKRVRQGTDGA------------KRAVMTWTSRSVL-------------GTRSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGAEA-------------------------PLGDGRGIALHATHLTIEHPTKRDRRT-FTSAPPRVW 220
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT) HSP 1 Score: 145 bits (366), Expect = 1.270e-38 Identity = 108/283 (38.16%), Postives = 141/283 (49.82%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSP-----SSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLED-RSILLHASELIVPHPTRLGATVRAVAAPPGMWSDL 277
+DNH+L V+KP GLL+Q+DRTGD D+ +LA+ Y++ +K G FV LVHRLDRP SGVM +ARTSKAA+RLS FR R +K Y AVV G G + + + D +GG G ++DV P +A+R R + R+LV V L+TGRKHQIR QLAE+G P++GD RYG + P D R + LHA L+V HPT+ V VA PP W+ L
Sbjct: 6 LDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAID---------------------KGGGG----------------------SVDVVPVGEGQRAALRYRTLARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQT-------------------------PFADGRGVALHAYRLVVEHPTKR-EPVTVVAPPPEAWAGL 218
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT) HSP 1 Score: 145 bits (366), Expect = 1.670e-38 Identity = 115/294 (39.12%), Postives = 143/294 (48.64%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMWSDLCGRSCIDEVFGDQPVTG 294
+DNH+L+VNKPAGL SQ DR+G V +L + ++ NK G ++ LVHRLD PVSGVM +ARTSKAAARL FR R VEKIY A+V G L G G+ +D + PAR RL++A P GK A L WEA+ T N TLVR+ TGRKHQIRVQLA G+PV+GD RY W L + LHA +L V HPTR ++ A P W D R +D + +G
Sbjct: 12 LDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERT-VEKIYLALVEGELEGEGVWEDFI----------------------APARDHM--RLVSA---DHPWGKRAVLRWEAL-------------MTRNGLTLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYRARRW-------------------------LAPGQMALHAWKLSVTHPTRR-ERMQWTAPVPSCW-DSAFRLKVDRLLAYLEASG 237
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: UPI001BBF82E8 (RNA pseudouridine synthase n=1 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBF82E8) HSP 1 Score: 143 bits (360), Expect = 1.690e-37 Identity = 117/276 (42.39%), Postives = 142/276 (51.45%), Query Frame = 0
Query: 2 DNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGM-WSD 276
DNH+L + KPAGLL Q DRTGDV + L +++++V K G+ F+A+VHRLDRPV+GV+ ARTSKAAARLSA FR R VEK Y AVVAG L G R LV + RR R R VPA PT P + A+L + + + RTL++V L TGR+HQIR+QLA GHP++GD RYG AG EPL R I L A L V HPTR V P G W D
Sbjct: 13 DNHLLALYKPAGLLVQGDRTGDVSLLELGKQWLKVRYAKPGQVFLAMVHRLDRPVAGVVLFARTSKAAARLSAQFRERR-VEKRYLAVVAGRLGGESGR---LVDH-----IERRDRRSRV----VPA------------PT--PQSQAARLRYTVLA-------------RDDRRTLLQVDLETGRRHQIRIQLAHAGHPLLGDLRYG-----------------------AG--EPLPGRQIALLAHVLCVDHPTRDERLVFTCPIPCGWPWPD 223
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Match: A0A271JHQ2_9BACT (PseudoU_synth_2 domain-containing protein n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271JHQ2_9BACT) HSP 1 Score: 142 bits (359), Expect = 1.920e-37 Identity = 112/274 (40.88%), Postives = 138/274 (50.36%), Query Frame = 0
Query: 1 MDNHVLLVNKPAGLLSQSDRTGDVDVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLTGRGIRQDLLVSPDASGAVARRGRGPRTGLSSVPARGGAGGRLLAAGPTSSPDGKLAQLEWEAIDVSPSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCHSRRGDATDESAVPPPRRAGRMEPLEDRSILLHASELIVPHPTRLGATVRAVAAPPGMW 274
+DNH+L+VNKPAG+LSQ D+TGD D+ LA+ Y++ +K G FV LVHRLDRP SGV+ +ARTSKAAARLS F+ R +K Y AV+ G L G D + D + R G G R++ G T S K A+L R+R R+LV V L+TGR+HQIR QLA G V+GD RYGR P P G I LHA L V HPTR A + VA PP W
Sbjct: 18 LDNHLLVVNKPAGMLSQEDKTGDPDLVTLAKAYLKERFDKPGNVFVGLVHRLDRPTSGVVVLARTSKAAARLSRQFQQRGP-DKTYLAVLDGRL---GDSPDWMELEDG-----------------ILERDGGGVRVVPVGSTGS---KAARL-------------RVRMLAADGTRSLVEVELLTGRRHQIRAQLAARGASVLGDFRYGR-----------------PTPFADGH-------GIALHAVRLTVEHPTRKEA-MTFVAKPPVSW 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9918.31773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp8_S_contig9918.31773.1 ID=prot_Ecto-sp8_S_contig9918.31773.1|Name=mRNA_Ecto-sp8_S_contig9918.31773.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=310bpback to top |