prot_Ecto-sp8_S_contig98836.31717.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98836.31717.1
Unique Nameprot_Ecto-sp8_S_contig98836.31717.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: D8LNC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.080e-30
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    4 GYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            GYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ
Sbjct:  170 GYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 229          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A6H5KEW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEW3_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.460e-30
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    4 GYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            GYNTILY+LACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ
Sbjct:  203 GYNTILYMLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 262          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A7S4ML51_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ML51_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 6.000e-9
Identity = 25/62 (40.32%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    2 QAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            +  +NT+++ L+C+PAAVS +YK++ L    +PVD++QL+  ++AF+ +F A+ +P  Y LQ
Sbjct:   89 RTAWNTVVFALSCIPAAVSQLYKEHTLAHFRQPVDSNQLNFLLSAFQFMFAAVVSPLVYALQ 150          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A7S4IGI8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IGI8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.140e-9
Identity = 25/62 (40.32%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    2 QAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            +  +NT+++ L+C+PAAVS +YK++ L    +PVD++QL+  ++AF+ +F A+ +P  Y LQ
Sbjct:  487 RTAWNTVVFALSCIPAAVSQLYKEHTLAHFRQPVDSNQLNFLLSAFQFMFAAVVSPLVYALQ 548          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: K0R956_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R956_THAOC)

HSP 1 Score: 58.5 bits (140), Expect = 1.810e-8
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    2 QAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            +  YNTI+Y LA +PAAVS +YK++ L Q  +PVD   L+L ++ F+++F  + +P AY LQ
Sbjct:  264 RTAYNTIIYCLASIPAAVSQLYKEHTLTQLRQPVDRDTLNLVLSIFQLLFAIIVSPLAYGLQ 325          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A6V2BJQ1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BJQ1_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.800e-7
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    2 QAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            +  +NTI++ L C+PAA+S +YK+  L    +PVD +Q++L ++  + VF  + +P  Y LQ
Sbjct:  448 RTAWNTIIFALNCIPAAISQMYKERTLSHFRQPVDPNQMNLIISIIQFVFAMIISPLVYSLQ 509          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A7S1YNP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNP3_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.160e-6
Identity = 22/62 (35.48%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    2 QAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQ 63
            +  YNTI++ +A +PAA+S +YK+  + +  +P+D ++L+L ++ F+++F  + +P AY LQ
Sbjct:   73 KTAYNTIVFCVAAIPAAISQLYKERTMIRLKQPIDRNKLNLVLSIFQLLFAVVVSPLAYGLQ 134          
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Match: A0A7S0UGZ6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGZ6_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 2.390e-5
Identity = 22/62 (35.48%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 LQAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQL 62
            +Q   NTIL++LAC+ AA S +YK+Y  + + +P+    L+  ++ F++VF  + +P  Y L
Sbjct:  146 IQTASNTILFLLACVLAAASQLYKEYIFQSYKQPIQPDYLNFLLSIFQIVFACIMSPLMYVL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98836.31717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LNC3_ECTSI1.080e-30100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEW3_9PHAE2.460e-3098.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4ML51_9STRA6.000e-940.32Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4IGI8_9STRA7.140e-940.32Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0R956_THAOC1.810e-845.16Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6V2BJQ1_9STRA7.800e-737.10Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1YNP3_9STRA3.160e-635.48Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S0UGZ6_9STRA2.390e-535.48Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98836contigEcto-sp8_S_contig98836:333..521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98836.31717.1mRNA_Ecto-sp8_S_contig98836.31717.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98836 333..521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98836.31717.1 ID=prot_Ecto-sp8_S_contig98836.31717.1|Name=mRNA_Ecto-sp8_S_contig98836.31717.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
LQAGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVV
FIALAAPAAYQLQ
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