prot_Ecto-sp8_S_contig9870.31699.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9870.31699.1
Unique Nameprot_Ecto-sp8_S_contig9870.31699.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length42
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9870.31699.1 vs. uniprot
Match: D7G732_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G732_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.710e-14
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:    8 IGYYGEQIAMWMCEECPEPKTTVAEGSTSHEDCV 41
            IGYYGEQIAMWMCEECP+ KTTVAEGSTS EDCV
Sbjct: 1712 IGYYGEQIAMWMCEECPDSKTTVAEGSTSQEDCV 1745
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9870.31699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G732_ECTSI2.710e-1491.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 1..40
e-value: 1.8E-4
score: 30.8
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 2..40
e-value: 3.6E-12
score: 45.8
NoneNo IPR availableGENE3D2.10.50.10coord: 1..41
e-value: 3.1E-8
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9870contigEcto-sp8_S_contig9870:5340..5465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9870.31699.1mRNA_Ecto-sp8_S_contig9870.31699.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9870 5340..5465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9870.31699.1 ID=prot_Ecto-sp8_S_contig9870.31699.1|Name=mRNA_Ecto-sp8_S_contig9870.31699.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=42bp
AECTPCPIGYYGEQIAMWMCEECPEPKTTVAEGSTSHEDCV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like