prot_Ecto-sp8_S_contig9852.31672.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9852.31672.1
Unique Nameprot_Ecto-sp8_S_contig9852.31672.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length73
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9852.31672.1 vs. uniprot
Match: A0A8J9V5U0_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9V5U0_9NEOP)

HSP 1 Score: 50.8 bits (120), Expect = 1.450e-5
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:    4 GRSGHLSVVKTAGADVTTRDIGGCSALDNAVCNGHIDVIGALLRHGADVNACD 56
            G +G ++ +  AGA+V   D  GCSAL  A  +GH+DV+  LL HGAD N  D
Sbjct:   11 GDAGRVATLIRAGANVDAVDENGCSALQRAAADGHVDVVRVLLEHGADPNRQD 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9852.31672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J9V5U0_9NEOP1.450e-547.17(lesser marbled fritillary) hypothetical protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 25..54
e-value: 1.8E-4
score: 30.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 26..57
e-value: 1.1E-5
score: 25.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 25..57
score: 11.728
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..59
e-value: 2.2E-12
score: 49.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..57
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..57
score: 14.345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9852contigEcto-sp8_S_contig9852:1223..1441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9852.31672.1mRNA_Ecto-sp8_S_contig9852.31672.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9852 828..1922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9852.31672.1 ID=prot_Ecto-sp8_S_contig9852.31672.1|Name=mRNA_Ecto-sp8_S_contig9852.31672.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=73bp
MSAGRSGHLSVVKTAGADVTTRDIGGCSALDNAVCNGHIDVIGALLRHGA
DVNACDDFTLLLKTIRPVRLVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom