prot_Ecto-sp8_S_contig9796.31572.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9796.31572.1
Unique Nameprot_Ecto-sp8_S_contig9796.31572.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length58
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9796.31572.1 vs. uniprot
Match: A0A6H5JFN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN1_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.590e-29
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:    1 MGCLANPRSSVLELGNYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKDATDPAVATF 58
            MGCLANPRSS+LELGNYLDAP PEELVSVTGWSVLKLSGEAGLTGFRK ATDPAVATF
Sbjct:  174 MGCLANPRSSILELGNYLDAPTPEELVSVTGWSVLKLSGEAGLTGFRKGATDPAVATF 231
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BLAST of mRNA_Ecto-sp8_S_contig9796.31572.1 vs. uniprot
Match: D8LJK3_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK3_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 7.160e-29
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0 
Query:    1 MGCLANPRSSVLELGNYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKDATDPAVATF 58
            MGCLANPRSSVLELG+YLDAPPPEELVSVTGWSVLKLSGEAGLTGFRK ATDPAVATF
Sbjct:  324 MGCLANPRSSVLELGSYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKYATDPAVATF 381
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BLAST of mRNA_Ecto-sp8_S_contig9796.31572.1 vs. uniprot
Match: A0A6H5JTT5_9PHAE (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.240e-20
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:    1 MGCLANPRSSVLELGNYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKDATDPAVATF 58
            MGCLANPRS++L+L  YLDAPPPEELVSV+G SV   SG+AG TGFRKDATDPAVATF
Sbjct:  352 MGCLANPRSAILQLDKYLDAPPPEELVSVSGSSV---SGDAGPTGFRKDATDPAVATF 406
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9796.31572.1 vs. uniprot
Match: D7FNS9_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.730e-13
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0 
Query:    1 MGCLANPRSSVLELGNYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKDATDPAVATF 58
            +GCL +  +  LELG YL  PPP ELVS  GWS+L+L+G  GLTGF   +++PAVA F
Sbjct:  216 LGCLESTNAFELELGGYLGTPPPSELVSTNGWSILQLAGAPGLTGFGNSSSNPAVAVF 273
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9796.31572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JFN1_9PHAE2.590e-2994.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJK3_ECTSI7.160e-2996.55SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JTT5_9PHAE2.240e-2079.31SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
D7FNS9_ECTSI1.730e-1355.17SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9796contigEcto-sp8_S_contig9796:271..444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9796.31572.1mRNA_Ecto-sp8_S_contig9796.31572.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9796 150..444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9796.31572.1 ID=prot_Ecto-sp8_S_contig9796.31572.1|Name=mRNA_Ecto-sp8_S_contig9796.31572.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=58bp
MGCLANPRSSVLELGNYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKDA
TDPAVATF
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