prot_Ecto-sp8_S_contig9750.31500.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9750.31500.1
Unique Nameprot_Ecto-sp8_S_contig9750.31500.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length279
Homology
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: D8LQW2_ECTSI (Mate efflux protein, multi antimicrobial extrusion family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW2_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 3.200e-172
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 0
Query:    1 ARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARFIAGFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 279
            ARLIGQLLTAALALGVVLLV+LEFFGVHLLQLLGATAVNEDQ     GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGV+AFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAA QVCNQLYLLLAFAADSLAVAAQGLVADRLGGGM+AEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAP+IAVVGLLQPLNGYVFVGDGILQGTQDFVYE
Sbjct:  184 ARLIGQLLTAALALGVVLLVLLEFFGVHLLQLLGATAVNEDQ-----GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPVIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 457          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: A0A6H5KTP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP2_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 2.560e-142
Identity = 227/232 (97.84%), Postives = 229/232 (98.71%), Query Frame = 0
Query:   48 GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 279
            GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGV+AFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVG TAIAA QVCNQLYLLLAFAADSLAVAAQG+VADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLN YVFVGDGILQGTQDFVYE
Sbjct:  305 GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGSTAIAAHQVCNQLYLLLAFAADSLAVAAQGVVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNSYVFVGDGILQGTQDFVYE 536          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: A0A2H3NK95_9BACT (MATE family efflux transporter n=1 Tax=Longimonas halophila TaxID=1469170 RepID=A0A2H3NK95_9BACT)

HSP 1 Score: 172 bits (437), Expect = 2.250e-47
Identity = 129/308 (41.88%), Postives = 164/308 (53.25%), Query Frame = 0
Query:    2 RLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQA------RFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKE----------PSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            R++ + +  AL  G   L +L+   V LL+L+GAT    + A      R  AG               + DT+TP+ + +  N +N VLDPILIF  GWGL GAA+ATVTA+W G +AF+VLL +            P+ R     LP  R G             +  RT AL G +  ATA AARVG TA+AA QV  QL+L +A   D+LAVAAQ LVA  LG       R V+ RL+ +GL LG G  + F +   VLP  FT D   I AI  +  VV LLQPLNG+VFVGDGI  G + F Y
Sbjct:   86 RVVVRAVVLALVTGAAALAVLQAAAVPLLRLMGATGELLEPALAYLRIRAFAGPAVLLITAGHGAFRGYQDTRTPMYVTIGLNLVNLVLDPILIFGLGWGLTGAAVATVTAQWIGALAFMVLLFRTYRADFHITWFWPAPR---ALLPLLRVGRD-----------LIMRTAALVGTMTLATAVAARVGVTAVAAHQVAAQLWLFMALVVDALAVAAQALVAKHLGAEAPERARTVSNRLLGWGLLLGCGLGIGFGLLRPVLPGFFTDDAATIQAILTVFPVVALLQPLNGFVFVGDGIYMGAERFPY 379          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: L1JL45_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JL45_GUITC)

HSP 1 Score: 171 bits (434), Expect = 4.140e-47
Identity = 114/278 (41.01%), Postives = 166/278 (59.71%), Query Frame = 0
Query:    1 ARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARFIAGFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            A  + Q LTAA  LGV  + +LEFF   +++ +G   +     R   G  DT+TPLLI L AN +NFVLDP+ I+       GA +AT  AEW     F+  L Q+E ++    +S+P +R   ++   +L +S AVF R++ALQ  L  AT+ AAR G  A+AA QV  Q++LL++FA DSLAVAAQ L+A+ LG G   + R +A RL      +G+  ++ F      LP +FT+D KV   +  ++  + ++QP+N  VFVGDGILQG++DF +
Sbjct:   89 AETLAQALTAAALLGVSTVGLLEFFSHGIIESMGT--IGNGAFR---GLQDTRTPLLILLVANLVNFVLDPLFIYGVNIN-SGAGLATAIAEWISAGLFMGTLRQRE-AVTSSLMSMPASRLHGRDEHPLLVASGAVFLRSIALQSVLTFATSQAARTGTEAVAAHQVGLQVWLLMSFAVDSLAVAAQTLIAEELGKGSKRDARVIADRLTTLAAQIGLLLMLAFLASSSFLPKVFTADAKVDEIVQHLLLYISVMQPINALVFVGDGILQGSEDFAF 359          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: A0A4Y6PVI4_9DELT (MATE family efflux transporter n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PVI4_9DELT)

HSP 1 Score: 171 bits (434), Expect = 7.450e-47
Identity = 121/295 (41.02%), Postives = 164/295 (55.59%), Query Frame = 0
Query:    6 QLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQA------RFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQ---KEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDF 276
            Q  T ALA G + L +L+ F   +L L+GAT    + A      R  AG               + DT+T +++ +A N +N VLDPILIF  GWG+ GAA ATV A+W G + F+ LL +   +E  I L   +L +     + GS++L        RT AL G +  ATA AARVG  A+AA QV NQL+  LA   D+LAVAAQ LVA  LG G + E R+V+ RL+ +GLG+G    + F     VLP +FT + + +A +  I   V +LQP+NG VFV DGI  G + F
Sbjct:   93 QAFTLALAAGALALALLQIFAGPILTLMGATGELREPAMTYLRIRAFAGPAVLLLNVGHGAFRGYQDTRTAMVVTIALNLVNLVLDPILIFGLGWGIAGAATATVIAQWLGALTFVWLLLKSRREELGIELVRPTLEQMLPFLRIGSSLLL-------RTGALVGTMTLATAVAARVGVVAVAAHQVANQLWGFLALVVDALAVAAQALVAKHLGSGDVDEARDVSDRLLQWGLGVGAVLALGFAALRPVLPGLFTDEAQTVARVMDIFIFVAVLQPINGVVFVWDGIYMGAEKF 380          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR)

HSP 1 Score: 171 bits (433), Expect = 8.510e-47
Identity = 121/305 (39.67%), Postives = 162/305 (53.11%), Query Frame = 0
Query:    2 RLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGA------TAVNEDQARFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNRE-------GWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            R + Q LT AL  G + +  L+ F   LL+L+GA       A+   + R +AG               + DT+TP L+ L  N +N  LDP+ IF FGWGL GAA ATV A+WAG + F+ +L  +  ++ +  V+LP+  E       GW+           +  RT AL   L  ATA A RVG   +AA QV  QL+L LA   D+LAVAAQ LVA   G G     R VA RL+ +G G+G+     F +F  VLP +FT D  V+ A+  +   V L+QPLN  VFV DG+L G +DF Y
Sbjct:   89 RAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWAGALGFVWVLFARRRALGIS-VALPRFAELRPFVRVGWE-----------LLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRY 381          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: A0A2A8CUL0_9BACT (MATE family efflux transporter n=2 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8CUL0_9BACT)

HSP 1 Score: 171 bits (432), Expect = 1.410e-46
Identity = 122/299 (40.80%), Postives = 166/299 (55.52%), Query Frame = 0
Query:    2 RLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGAT------AVNEDQARFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLA-QKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            R++ + +  A+  G V L++L+ F   +L+L+GA       A+   + R  AG               + DT+TP+ + +  N +N  LDPILIF F WGL GAA ATV A+W G + FLVLL  ++   + +RP+ +PK R       A LT    +F RT AL G +  ATA A R+G TA+AA QV  QL+L LA   D+LAV+ Q LV+  LG G     R V+ RL+ +GLG+G+   V F     VLP  FT D   IAA+  I   V +LQPLNG VFV DG+  G + F Y
Sbjct:   88 RVVMRAILLAILSGAVALLLLQVFAEPILRLMGADDGLLGPALTYLRIRACAGPAVLLITASHGAFRGYQDTRTPMKVTIGFNIINATLDPILIFGFDWGLAGAATATVAAQWIGALTFLVLLLHRRREELGIRPL-VPKLRSL----GAFLTIGRDLFIRTSALVGTMTLATAIATRIGTTAVAAHQVAAQLWLFLALLVDALAVSGQALVSKHLGAGDEDAARSVSNRLLQWGLGVGILLGVAFYGLQPVLPDFFTDDAATIAAVLTIFPFVAVLQPLNGLVFVWDGLYMGVEAFSY 381          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: UPI0003B79E6F (MATE family efflux transporter n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B79E6F)

HSP 1 Score: 167 bits (423), Expect = 2.870e-45
Identity = 120/298 (40.27%), Postives = 154/298 (51.68%), Query Frame = 0
Query:    2 RLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGA------TAVNEDQARFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            R++ + L  AL  G V L  L+     LL L+GA       A+   + R  AG               + DT+TP+ I +  N +N VLDP+LIF  GWGL GAA+AT  A+W G + F  LL          P + P  R  W      L     +F RT AL G +  ATA AAR+G TA+AA QV  QL+L LA   D+LAVA Q LV+  +G G +A  R V  RL+V+GL +G G  V F +   VLP  FT D   IA +  +   V  LQPLNG VFV DG+  G + F Y
Sbjct:   89 RVVLRALVLALGAGAVALAALQLLARPLLALMGAGERLMEPALTYLRIRACAGPAVLLITAGNGAFRGYQDTRTPMAITVGFNLINLVLDPLLIFGLGWGLAGAALATAGAQWTGALIFWWLLLNTRREALGIPHTWPSLRSLWP----FLKIGRDLFLRTAALIGTMTLATAVAARIGVTAVAAHQVAAQLWLFLALVVDALAVAGQALVSKHVGRGDVAAARSVGNRLLVWGLVVGCGLGVGFALLQPVLPAFFTEDPATIALVLTVFPFVAALQPLNGLVFVADGLYMGAERFGY 382          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: A0A847HV96_9DEIN (MATE family efflux transporter n=1 Tax=Deinococcales bacterium TaxID=2478479 RepID=A0A847HV96_9DEIN)

HSP 1 Score: 166 bits (421), Expect = 5.980e-45
Identity = 101/229 (44.10%), Postives = 137/229 (59.83%), Query Frame = 0
Query:   48 GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDF 276
            GFLDT+TPL   L  N +N VLDP+ IF FGWGL GAA AT+ A+W G  AF++ L +         V +PK    W+E +  L   + +  RT +L G L  ATA AARVG   +AA QV +QL+L L+   DSLAVAAQ LVA   G G+    R VA R+I +G  LGV   ++F +   +L  +FT+D  V+AA+  +   + ++QPLN  VFV DG+  G ++F
Sbjct:  161 GFLDTRTPLRFALLLNLVNLVLDPLFIFGFGWGLAGAAYATLIAQWVGAAAFVLGLVRGP-----HRVPVPKRLPAWRELAPFLRVGSDMLLRTSSLVGTLTLATAIAARVGVVEVAAHQVASQLWLFLSLTIDSLAVAAQALVATEAGRGVPGGARRVADRVIAWGFALGVAQALLFLLAKPLLVGLFTTDPAVVAALDSVYLFIVVMQPLNAVVFVLDGVFMGAEEF 384          
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Match: Q2S086_SALRD (MATE efflux family protein n=11 Tax=Salinibacter TaxID=146918 RepID=Q2S086_SALRD)

HSP 1 Score: 165 bits (418), Expect = 1.460e-44
Identity = 123/304 (40.46%), Postives = 165/304 (54.28%), Query Frame = 0
Query:    2 RLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGAT------AVNEDQARFIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFLVLL--AQK-EPSIRLRPVSLPKNREGWKEGSAV---LTSSAAVFGRTVALQGALGTATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVY 278
            R + + L  A+A+G+V L  L+     +L ++GA+      A++  + R +AG               + DT+TP+++ L  N +N  LDP+LIF F WGL GAA AT   +W G + FL LL  AQ+ E  IRLR          W     +   L     +F RT +L G +  ATA AARVG TA+AA QV  QL+  LA   D+LAVAAQ LV+  LG   +   REVA RL+ +GL +GVG  + F     VLP  FT D   +AA+  +   V +LQPLNG VFVGDGI  G + F Y
Sbjct:   86 RAVVRALVLAMAVGIVALAALQALARPILIVMGASEELMAPALSYLRIRALAGPAVLLITASHGAFRGYQDTRTPMVVTLGFNVVNGGLDPLLIFVFDWGLAGAAAATAVGQWVGALTFLYLLLYAQRDELGIRLR----------WPAPHTLVPFLKVGRDLFLRTASLVGTMTLATAMAARVGVTAVAAHQVAAQLWTFLALLVDALAVAAQALVSKHLGADDLESAREVANRLVQWGLAVGVGLGLGFWALRPVLPGFFTDDPDTVAALLDVYLFVVVLQPLNGLVFVGDGIYMGAEAFPY 379          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9750.31500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW2_ECTSI3.200e-17296.42Mate efflux protein, multi antimicrobial extrusion... [more]
A0A6H5KTP2_9PHAE2.560e-14297.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2H3NK95_9BACT2.250e-4741.88MATE family efflux transporter n=1 Tax=Longimonas ... [more]
L1JL45_GUITC4.140e-4741.01Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A4Y6PVI4_9DELT7.450e-4741.02MATE family efflux transporter n=1 Tax=Persicimona... [more]
D7CWB4_TRURR8.510e-4739.67MATE efflux family protein n=1 Tax=Truepera radiov... [more]
A0A2A8CUL0_9BACT1.410e-4640.80MATE family efflux transporter n=2 Tax=Longibacter... [more]
UPI0003B79E6F2.870e-4540.27MATE family efflux transporter n=1 Tax=Salisaeta l... [more]
A0A847HV96_9DEIN5.980e-4544.10MATE family efflux transporter n=1 Tax=Deinococcal... [more]
Q2S086_SALRD1.460e-4440.46MATE efflux family protein n=11 Tax=Salinibacter T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002528Multi antimicrobial extrusion proteinPFAMPF01554MatEcoord: 152..276
e-value: 5.0E-15
score: 55.5
IPR002528Multi antimicrobial extrusion proteinTIGRFAMTIGR00797TIGR00797coord: 43..276
e-value: 6.9E-47
score: 158.1
NoneNo IPR availablePANTHERPTHR42893FAMILY NOT NAMEDcoord: 46..278
NoneNo IPR availablePANTHERPTHR42893:SF28coord: 46..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 192..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..265
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 242..264
NoneNo IPR availableTMHMMTMhelixcoord: 210..232
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9750contigEcto-sp8_S_contig9750:588..6712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9750.31500.1mRNA_Ecto-sp8_S_contig9750.31500.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9750 588..6712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9750.31500.1 ID=prot_Ecto-sp8_S_contig9750.31500.1|Name=mRNA_Ecto-sp8_S_contig9750.31500.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=279bp
ARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARFIAGFL
DTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVIAFL
VLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGT
ATAFAARVGPTAIAALQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMI
AEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPII
AVVGLLQPLNGYVFVGDGILQGTQDFVYE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE_fam