prot_Ecto-sp8_S_contig97483.31494.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97483.31494.1
Unique Nameprot_Ecto-sp8_S_contig97483.31494.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length37
Homology
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BLAST of mRNA_Ecto-sp8_S_contig97483.31494.1 vs. uniprot
Match: D7FXQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ0_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-13
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MTTLVFMLQGIIAWGVVSYSIAETSAADEDLSSGITT 37
            MTTL FMLQGIIAWGVVSYSIAETSAADEDLSSGITT
Sbjct:    1 MTTLGFMLQGIIAWGVVSYSIAETSAADEDLSSGITT 37
[Close]
BLAST of mRNA_Ecto-sp8_S_contig97483.31494.1 vs. uniprot
Match: D7FU49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU49_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 1.060e-5
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    2 TTLVFMLQGIIAWGVVSYSIAETSAADEDLSSGITT 37
            TTLVFMLQG+IAWGVV+ S   TSAA+EDLS  ITT
Sbjct:    7 TTLVFMLQGVIAWGVVTSSNDGTSAAEEDLSMHITT 42
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97483.31494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXQ0_ECTSI1.400e-1397.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU49_ECTSI1.060e-575.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.628

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97483contigEcto-sp8_S_contig97483:5..115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97483.31494.1mRNA_Ecto-sp8_S_contig97483.31494.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97483 5..115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97483.31494.1 ID=prot_Ecto-sp8_S_contig97483.31494.1|Name=mRNA_Ecto-sp8_S_contig97483.31494.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=37bp
MTTLVFMLQGIIAWGVVSYSIAETSAADEDLSSGITT
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