prot_Ecto-sp8_S_contig9695.31405.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9695.31405.1
Unique Nameprot_Ecto-sp8_S_contig9695.31405.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9695.31405.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.120e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:   86 AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS 123
            AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS
Sbjct:  297 AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS 334
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BLAST of mRNA_Ecto-sp8_S_contig9695.31405.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.120e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:   86 AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS 123
            AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS
Sbjct:  321 AIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSAS 358
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BLAST of mRNA_Ecto-sp8_S_contig9695.31405.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.830e-7
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   86 AIFCSSVPQATFKNANFTRNSALWGGAVALFSSG 119
            AI+ S+VPQATFKNANFT N+A+WGGAVA FSSG
Sbjct:  187 AIYSSNVPQATFKNANFTSNAAVWGGAVASFSSG 220
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BLAST of mRNA_Ecto-sp8_S_contig9695.31405.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 6.480e-5
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:   86 AIFCSSVPQATFKNANFTRNSALWGGAVALFS 117
            AI+ S+VPQATFKNANF  N+A+WGGAVA FS
Sbjct:  331 AIYSSNVPQATFKNANFDGNAAVWGGAVASFS 362
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9695.31405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L324_9PHAE2.120e-13100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI2.120e-13100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L874_9PHAE5.830e-779.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI6.480e-575.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 74..89
e-value: 0.13
score: 12.8
coord: 16..32
e-value: 0.1
score: 13.2
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 15..36
e-value: 1.7E-4
score: 19.2
coord: 73..90
e-value: 0.0018
score: 16.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 12..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9695contigEcto-sp8_S_contig9695:272..2348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9695.31405.1mRNA_Ecto-sp8_S_contig9695.31405.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9695 272..2348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9695.31405.1 ID=prot_Ecto-sp8_S_contig9695.31405.1|Name=mRNA_Ecto-sp8_S_contig9695.31405.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=123bp
GAINAYDDVIITTVGETSFVGNTAEEGGAVYADTGVTVALSGTQLYENNS
ASSNGGAIRLSFAASVSITGQPVFHDNSAPDGSGGAIFCSSVPQATFKNA
NFTRNSALWGGAVALFSSGGSAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence