prot_Ecto-sp8_S_contig95133.31096.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95133.31096.1
Unique Nameprot_Ecto-sp8_S_contig95133.31096.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length49
Homology
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A6H5JCX1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 7.270e-17
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ
Sbjct:  492 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 531          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: D8LJ67_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ67_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.720e-16
Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MISSRVRKGEYHTLAAF SDVMLLFDNAREYNVEGSLVYQ
Sbjct:  456 MISSRVRKGEYHTLAAFASDVMLLFDNAREYNVEGSLVYQ 495          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A1I9G969_BRUMA (Bm11255 (Fragment) n=1 Tax=Brugia malayi TaxID=6279 RepID=A0A1I9G969_BRUMA)

HSP 1 Score: 48.1 bits (113), Expect = 4.570e-5
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MI+ ++++ EYHTL     D++L+F+NA+ YNVEGS +Y+
Sbjct:   89 MINKKLKRDEYHTLEELLKDIVLVFENAKTYNVEGSDIYE 128          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A0S7L8K1_9TELE (SMCA4 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7L8K1_9TELE)

HSP 1 Score: 46.2 bits (108), Expect = 4.690e-5
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    2 ISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            I  R+R   Y +L   E DVMLLF NA+ +N+EGSL+Y+
Sbjct:   36 IKERIRSHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYE 74          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A183DTX7_9BILA (Uncharacterized protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183DTX7_9BILA)

HSP 1 Score: 48.1 bits (113), Expect = 4.710e-5
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            +I+ ++++ EYHTL    SD++L+F NA+ YNVEGS +Y+
Sbjct:  406 VINKKLKRSEYHTLDQLLSDILLVFKNAKSYNVEGSEIYE 445          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A158PQ66_BRUPA (Uncharacterized protein n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A158PQ66_BRUPA)

HSP 1 Score: 48.1 bits (113), Expect = 4.720e-5
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MI+ ++++ EYHTL     D++L+F+NA+ YNVEGS +Y+
Sbjct:  415 MINKKLKRDEYHTLEELLKDIVLVFENAKTYNVEGSDIYE 454          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: Q8IHI6_BRUMA (Polybromodomain protein n=2 Tax=Brugia TaxID=6278 RepID=Q8IHI6_BRUMA)

HSP 1 Score: 48.1 bits (113), Expect = 4.720e-5
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MI+ ++++ EYHTL     D++L+F+NA+ YNVEGS +Y+
Sbjct:  372 MINKKLKRDEYHTLEELLKDIVLVFENAKTYNVEGSDIYE 411          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A1P6BU68_BRUMA (Bm2393, isoform c n=17 Tax=Onchocercidae TaxID=6296 RepID=A0A1P6BU68_BRUMA)

HSP 1 Score: 48.1 bits (113), Expect = 4.720e-5
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MI+ ++++ EYHTL     D++L+F+NA+ YNVEGS +Y+
Sbjct:  389 MINKKLKRDEYHTLEELLKDIVLVFENAKTYNVEGSDIYE 428          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A367JBU7_RHIST (Uncharacterized protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JBU7_RHIST)

HSP 1 Score: 47.8 bits (112), Expect = 6.430e-5
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            MI  R+    Y T+A FESD  L+F+NAR +N EGS+VY+
Sbjct:  569 MIKERIHSSYYETVAEFESDFHLMFENARTFNEEGSVVYE 608          
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Match: A0A8C7ZSH9_9TELE (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7ZSH9_9TELE)

HSP 1 Score: 47.8 bits (112), Expect = 6.460e-5
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    2 ISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQ 40
            I  R+R   Y TL   E DVMLLF NA+ +N+EGSL+Y+
Sbjct: 1342 IKERIRSHRYRTLGDLERDVMLLFQNAQTFNLEGSLIYE 1380          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95133.31096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JCX1_9PHAE7.270e-17100.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJ67_ECTSI4.720e-1697.50Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A1I9G969_BRUMA4.570e-547.50Bm11255 (Fragment) n=1 Tax=Brugia malayi TaxID=627... [more]
A0A0S7L8K1_9TELE4.690e-551.28SMCA4 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A183DTX7_9BILA4.710e-547.50Uncharacterized protein n=1 Tax=Gongylonema pulchr... [more]
A0A158PQ66_BRUPA4.720e-547.50Uncharacterized protein n=1 Tax=Brugia pahangi Tax... [more]
Q8IHI6_BRUMA4.720e-547.50Polybromodomain protein n=2 Tax=Brugia TaxID=6278 ... [more]
A0A1P6BU68_BRUMA4.720e-547.50Bm2393, isoform c n=17 Tax=Onchocercidae TaxID=629... [more]
A0A367JBU7_RHIST6.430e-552.50Uncharacterized protein (Fragment) n=1 Tax=Rhizopu... [more]
A0A8C7ZSH9_9TELE6.460e-553.85SWI/SNF related, matrix associated, actin dependen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 20..39
score: 43.8
coord: 2..20
score: 26.2
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..41
e-value: 3.3E-10
score: 39.9
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..39
score: 10.236
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..46
e-value: 2.5E-12
score: 48.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95133contigEcto-sp8_S_contig95133:384..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95133.31096.1mRNA_Ecto-sp8_S_contig95133.31096.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95133 384..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95133.31096.1 ID=prot_Ecto-sp8_S_contig95133.31096.1|Name=mRNA_Ecto-sp8_S_contig95133.31096.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=49bp
MISSRVRKGEYHTLAAFESDVMLLFDNAREYNVEGSLVYQVSTSSSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf