prot_Ecto-sp8_S_contig94865.31043.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94865.31043.1
Unique Nameprot_Ecto-sp8_S_contig94865.31043.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 4.130e-41
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVLARCTNGGTPYTFLVCQ 66
            MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCV+ARCTNGGTPYTFLVCQ
Sbjct:  403 MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVVARCTNGGTPYTFLVCQ 468          
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.670e-39
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 0
Query:    1 MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVLARCTNGGTPYTFLVCQ 66
            MCWGSDSCYSHE+AMEGLYYDEVQ DSVLQYGGHATQILWK+TEQVGCV+ARCTNGGTPY FLVCQ
Sbjct:  302 MCWGSDSCYSHERAMEGLYYDEVQSDSVLQYGGHATQILWKSTEQVGCVVARCTNGGTPYMFLVCQ 367          
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.400e-33
Identity = 55/64 (85.94%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    3 WGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVLARCTNGGTPYTFLVCQ 66
            WGSDSCYSH+KA +GLYYDEVQ DSVLQYGGHATQILWKA EQVGC  ARCTNGGTP+ FLVCQ
Sbjct:  280 WGSDSCYSHKKATKGLYYDEVQSDSVLQYGGHATQILWKAAEQVGCAGARCTNGGTPHAFLVCQ 343          
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Match: A0A6H5KK50_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK50_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 9.650e-32
Identity = 50/66 (75.76%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    1 MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVLARCTNGGTPYTFLVCQ 66
            MCWG+D+CY+HE AME LY +EVQF +V  Y GHATQILWK+T++VGCVLA+CTNGGTPYTFLVCQ
Sbjct:  141 MCWGTDTCYNHEYAMEKLYVEEVQFGAVTDYIGHATQILWKSTKKVGCVLAQCTNGGTPYTFLVCQ 206          
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.380e-29
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVLARCTNGGTPYTFLVCQ 66
            +CWG+D+CY+H+ AME LY +EVQFD V  Y GHATQILWK+T+ VGCVLA C+NGGTPYTFLVCQ
Sbjct:  228 VCWGTDTCYNHDYAMEHLYVEEVQFDDVTDYIGHATQILWKSTKNVGCVLAGCSNGGTPYTFLVCQ 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94865.31043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJX3_ECTSI4.130e-4198.48Pathogenesis-related protein, class 1 n=3 Tax=Ecto... [more]
A0A6H5JZI7_9PHAE6.670e-3992.42SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCL1_9PHAE3.400e-3385.94SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KK50_9PHAE9.650e-3275.76SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJW7_ECTSI1.380e-2972.73Pathogenesis-related protein, class 1 n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainPFAMPF00188CAPcoord: 18..66
e-value: 4.5E-8
score: 34.0
IPR035940CAP superfamilyGENE3D3.40.33.10coord: 3..66
e-value: 3.4E-9
score: 38.6
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 20..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94865contigEcto-sp8_S_contig94865:3..437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94865.31043.1mRNA_Ecto-sp8_S_contig94865.31043.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94865 3..437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94865.31043.1 ID=prot_Ecto-sp8_S_contig94865.31043.1|Name=mRNA_Ecto-sp8_S_contig94865.31043.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=66bp
MCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVL
ARCTNGGTPYTFLVCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014044CAP_domain
IPR035940CAP_sf