mRNA_Ecto-sp8_S_contig9459.30992.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9459.30992.1
Unique NamemRNA_Ecto-sp8_S_contig9459.30992.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: D8LEV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV7_ECTSI)

HSP 1 Score: 957 bits (2475), Expect = 0.000e+0
Identity = 536/629 (85.21%), Postives = 545/629 (86.65%), Query Frame = 1 
Query:    1 KYPAFQATPHTITDLLELNSDFLLEEGEGQLADVTAIVIASPSLEAQLEALLVSTVQPCQVK------------------------GKK-----------GRGGLAXXXXXXXXXDGRFFDVKTGMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVSTVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDVQGISKAAEAAAVAAGFARRKKTFRRRTRDALDQSRRRLARVGAVGDSDPDXXXXXXXXXXXPSDRNSRSLQAVSGGLGDASARGDTDGSPSSLARRLDERQLRAQFRDLSARGGQFFRTAGHSPEDLVLIVVDGRDQAEMLGPLYREIVEGGXXXXXXXXXXXIVLITHGPDNVEDETSPQXXXQETLGASPVRTTARRDCREVAEALGVSPSKTPADGGGSNXXNAGRSKTGGGNGDMNHAIQRPRGLGEVFGEGKGEGETRWDQLTRWLGGKAQGSDEMR 1782
            KYPAFQATPHTIT LLELNSDFLLEEG+GQLADVTAIVIASPSLEAQLEALLVSTVQPCQV                         GK+           G  G+          DGRFFDVKTGMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVS VKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAA SGTAVSVLSPADVLFSQWFLHKDL+RLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLD+QGISKAAEAAAVAAGFARRKKTFRRRTRDA DQSRRRLAR GAV  S   XXXXX      PSDRNSR+LQA SGG GDASARGDTDGSPSSL RRLDE QLRAQFRDLSARGGQFFRTA HSPEDLVLIVVDGRDQAE+LGPLYR+IVEGGXXXXXXX    IVLITHGPD+V DETSPQ   QE LGA PVRTTARRDCREVAEALGVSPSKTPADGG SN  NAGRSKTGGGNGDMNH IQRPRGLGEVFGEGKG GETRWDQLTRWLGGKAQGSDEMR
Sbjct:   57 KYPAFQATPHTITGLLELNSDFLLEEGKGQLADVTAIVIASPSLEAQLEALLVSTVQPCQVWVAMPAMETAENLAVTSTYQKSNRFGKRLHLVKSDFFSDGAPGVVGGGGRGSGGDGRFFDVKTGMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVSMVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAVSGTAVSVLSPADVLFSQWFLHKDLIRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDIQGISKAAEAAAVAAGFARRKKTFRRRTRDAPDQSRRRLARDGAVAASXXXXXXXXLGSLASPSDRNSRALQAASGGRGDASARGDTDGSPSSLVRRLDEPQLRAQFRDLSARGGQFFRTADHSPEDLVLIVVDGRDQAELLGPLYRQIVEGGXXXXXXXAEVFIVLITHGPDSVGDETSPQQQQQEALGAPPVRTTARRDCREVAEALGVSPSKTPADGGSSNN-NAGRSKTGGGNGDMNHLIQRPRGLGEVFGEGKGGGETRWDQLTRWLGGKAQGSDEMR 684
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A6H5KSC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC9_9PHAE)

HSP 1 Score: 807 bits (2084), Expect = 1.270e-279
Identity = 482/635 (75.91%), Postives = 495/635 (77.95%), Query Frame = 1 
Query:    1 KYPAFQATPHTITDLLELNSDFLLEEGEGQLADVTAIVIASPSLEAQLEALLVSTVQPCQV-----------------------------------------KGKKGRGGLAXXXXXXXXXDGRFFDVKTGMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVSTVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDVQGISKAAEAAAVAAGFARRKKTFRRRTRDALDQSRRRLARVGAVGDSDPDXXXXXXXXXXXPSDRNSRSLQAVSGGLGDASARGDTDGSPSSLARRLDERQLRAQFRDLSARGGQFFRTAGHSPEDLVLIVVDGRDQAEMLGPLYREIVEGGXXXXXXXXXXXIVLITHGPDNVEDETSPQXXXQETLGASPVRTTARRDCREVAEALGVSPSKTPADGGGSNXXNAGRSKTGGGNGDMNHAIQRPRGLGEVFGEGKGEGETRWDQLTRWLGGKAQGSDEMR 1782
            KY AFQA PHT+TDLLEL SDFLLEEG+GQLADVTAI+IASPSLEAQLEALLVS VQPCQV                                           K G GG     XXXXXXDG FFDVKTGMFQLSMQADTTFIWLMEPDV+PGSRFLYLLMHVS VKDMAGVY SEGGVMPAAQ +HRSDTSASFD GATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSG+EAAAGAPRIPVDGDEGGGVALGLGGAAG GTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDVQGISKAAEAAA+AAGFARRKK FRRR            AR+GAV  S PD           PSDRNSRSLQA SGG GDASAR DTD SPSSL RRLDE QLRAQFRDLSARGGQFFRTA HSPE+LVLIVVDGRDQAE+LGPLYREIVEG XXXXXXXXXXX                  XXX E L A PV  TARRDCREVAEALGVSP K  A  GGSN  NAGRSKTGGGN D+NH IQRPRGLGEV           WD+L RWLGGKAQGSDEM+
Sbjct:  173 KYLAFQAAPHTVTDLLELKSDFLLEEGKGQLADVTAILIASPSLEAQLEALLVSAVQPCQVWVAMPALETAENLAVTSTYQKSTRFGKRLHLVKSDLFSDGPPAKVGEGG----GXXXXXXDGSFFDVKTGMFQLSMQADTTFIWLMEPDVVPGSRFLYLLMHVSMVKDMAGVYSSEGGVMPAAQRQHRSDTSASFDGGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGDEAAAGAPRIPVDGDEGGGVALGLGGAAGLGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDVQGISKAAEAAAIAAGFARRKKMFRRR------------ARLGAVVASAPDQSRRRLGSLASPSDRNSRSLQAASGGRGDASAREDTDSSPSSLVRRLDEPQLRAQFRDLSARGGQFFRTADHSPENLVLIVVDGRDQAELLGPLYREIVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALRAPPVPATARRDCREVAEALGVSPPKAAAGRGGSND-NAGRSKTGGGNSDLNHPIQRPRGLGEV-----------WDKLARWLGGKAQGSDEMK 779
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A7S3XR94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR94_HETAK)

HSP 1 Score: 89.0 bits (219), Expect = 5.160e-15
Identity = 82/297 (27.61%), Postives = 121/297 (40.74%), Query Frame = 1 
Query:   28 HTITDLLELNSDFLLEEGEGQLADVTAIVI---ASPSLEAQLEALLVSTVQP-----CQVKGKKGRGGLAXXXXXXXXXDGRFFDVKT-------GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVSTVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSD 873
            +T+ +LL L S   L   +      T +++      SLE QL+AL   T++P     C     +     A         D + + V +       G FQ ++QA T ++W+++ D+LPG+RFL +L HV  +KD+ G +GS G +MP   T  + +  +  D G        D            +R  S A                                           L  AD+L SQWFL  D VRLLFRE W    +            L+YS+R++A +PSYVLP D
Sbjct:    6 YTLPELLALPSAGPLRAKQNGGRSPTTVILNHWKRESLELQLQALAGQTLRPEQVWVCLFNSDRVEYYRAIVDRYKAEFDNQLYMVISEFNFKYFGRFQFALQASTKYVWIIDDDILPGARFLEILNHVGGIKDLKGAFGSIGWLMPHF-TEPKLELPSYRDPGLKGGLYFPD----------MRYRVASQA-------------------------------------------LMAADLLCSQWFLETDSVRLLFREPWVTFETAED-------YHLAYSMRKFADLPSYVLPMD 241
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A6H5KK73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK73_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.190e-9
Identity = 63/216 (29.17%), Postives = 90/216 (41.67%), Query Frame = 1 
Query:  268 GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVSTVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFAL----WDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNM 903
            G FQ+++QA T ++W+++ DV+PG  FL+ L H+      AG+Y +EG                    G   P AL    W  P      +   +R+ +D             G   +P                   G  V  L   D+L S WF+    V+LLFREKW    +G           L+YSLR++AGV S+VLP D    E  GN+
Sbjct:  139 GRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHI------AGIYEAEGA------------------DGTIGPMALGSVGWIMPGVKTTEKYYSYRYHTDK------------GGLFLPDK---------------RYGIPVPHLQEVDLLCSHWFVETGWVKLLFREKWETPQTGED-------YMLAYSLRKHAGVRSFVLPMDLGDSETWGNV 296
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A7S3UQZ7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQZ7_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 2.500e-8
Identity = 60/205 (29.27%), Postives = 82/205 (40.00%), Query Frame = 1 
Query:  298 TTFIWLMEPDVLPGSRFLYLLMHVSTVKDM-AGVYGSEGGVMPAAQTRHRSDTSASFD--RGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGNM 903
            T ++W+++ D++PG R L L  H   V D+ AGV G+ G VMP      R+     FD  RGA     L+          E  H ++                                            + L  AD++ S WFL  D VR++FREKW    +            LSYS+RRYA + SYVLPS    P   GN+
Sbjct:    1 TEYVWIVDDDIVPGPRTLALFTHALNVPDLRAGVLGTIGWVMPPLNEYERA-----FDSYRGAGAKGGLY---------FEDPHYNIR------------------------------------------ATRLIKADLVCSHWFLRADHVRVVFREKWVTYETAED-------YQLSYSMRRYANLESYVLPSIAKDPSTWGNL 142
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A8B8ZDY5_PHODC (uncharacterized protein LOC103708423 isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B8ZDY5_PHODC)

HSP 1 Score: 59.7 bits (143), Expect = 1.460e-5
Identity = 56/204 (27.45%), Postives = 82/204 (40.20%), Query Frame = 1 
Query:  268 GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVS-TVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDP 876
            G FQ+++Q +  F+++++ D++PG R L +L HV  T K    V GS G ++P    R +  T  S+ +  +    L+                L D               P   +                    AV  +   D L S WFL  DLV+ LF EK +   +G         L LSY L++Y    SYVLP DP
Sbjct:  266 GRFQMALQTEADFVYILDDDMIPGRRMLEILSHVGGTEKYKNAVLGSIGRILPF---RQKDFTFPSYRKFRSKEAGLY----------------LPD---------------PAYDI--------------------AVERIVQVDFLSSSWFLSADLVKTLFVEKPSTFMTGED-------LHLSYQLQKYRNAGSYVLPVDP 408
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A2I0A969_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A969_9ASPA)

HSP 1 Score: 58.9 bits (141), Expect = 2.530e-5
Identity = 53/204 (25.98%), Postives = 83/204 (40.69%), Query Frame = 1 
Query:  268 GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVS-TVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDP 876
            G FQ+++Q ++ F+++++ D++PG + + +L HV+ T K    V GS G ++P    R +  T  S+ +  +    L+                L D               P   +                    +V  +   D L S WFL  DLV+ LF E  A   +G         L LSY L++Y    SYVLP DP
Sbjct:  312 GRFQIALQTESDFVYILDDDMIPGKKMMQILAHVAGTEKYKNSVLGSIGRILPF---RQKDFTFPSYRKFRSKEAGLY----------------LPD---------------PAYDI--------------------SVGSILQVDFLSSSWFLSSDLVKTLFTETPATFTTGED-------LHLSYQLQKYRNAGSYVLPVDP 454
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: J3LI56_ORYBR (Uncharacterized protein n=16 Tax=Oryzeae TaxID=147380 RepID=J3LI56_ORYBR)

HSP 1 Score: 58.5 bits (140), Expect = 3.290e-5
Identity = 56/205 (27.32%), Postives = 84/205 (40.98%), Query Frame = 1 
Query:  268 GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVS-TVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPA 879
            G FQ+++Q+++ F++L++ D++PG+R L +L HV  T K    V GS G ++P    R +  T  S+ +  +    L+                L D               P   +                     V  +   D L S WFL  DLV+ LF E      +G         L LSY L++Y G  S+VLP DPA
Sbjct:  235 GRFQMALQSESDFVYLLDDDMIPGARMLEILSHVGGTDKYRNAVLGSIGRILPF---RQKDFTFPSYRKFRSKEAGLY----------------LPD---------------PAYDI--------------------TVDRIVQVDFLSSSWFLAADLVKALFIETPFTFMTGED-------LHLSYQLQKYMGAGSFVLPVDPA 378
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BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Match: A0A6P5H2H3_ANACO (uncharacterized protein LOC109728978 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2H3_ANACO)

HSP 1 Score: 57.8 bits (138), Expect = 5.710e-5
Identity = 54/204 (26.47%), Postives = 79/204 (38.73%), Query Frame = 1 
Query:  268 GMFQLSMQADTTFIWLMEPDVLPGSRFLYLLMHVS-TVKDMAGVYGSEGGVMPAAQTRHRSDTSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGAPRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLLFREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDP 876
            G FQ+++Q ++ F+++++ D++PG R L +L HV  T K    V GS G ++P  Q      +   F                     ++   +L D               P   +                     V  +   D L S WFL  DLV+ LF EK    A+G         L LSY L++Y    SYVLP DP
Sbjct:  240 GRFQMALQTESDFVYILDDDMIPGKRMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFMFPSYRKFK-------------------SKEAGLYLPD---------------PAYDI--------------------TVERIVQVDFLSSSWFLPTDLVKTLFIEKPFTFATGED-------LHLSYQLQKYRNAGSYVLPVDP 382
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9459.30992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LEV7_ECTSI0.000e+085.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSC9_9PHAE1.270e-27975.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XR94_HETAK5.160e-1527.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5KK73_9PHAE1.190e-929.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UQZ7_HETAK2.500e-829.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8B8ZDY5_PHODC1.460e-527.45uncharacterized protein LOC103708423 isoform X1 n=... [more]
A0A2I0A969_9ASPA2.530e-525.98Uncharacterized protein n=1 Tax=Apostasia shenzhen... [more]
J3LI56_ORYBR3.290e-527.32Uncharacterized protein n=16 Tax=Oryzeae TaxID=147... [more]
A0A6P5H2H3_ANACO5.710e-526.47uncharacterized protein LOC109728978 n=3 Tax=Anana... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9459contigEcto-sp8_S_contig9459:1412..7187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop0
Start0
Seed ortholog score63.9
Seed ortholog evalue2.8e-07
Seed eggNOG ortholog42345.XP_008791567.1
Model size1782
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2CMCB@1,2QPYF@2759,37MZ0@33090,3GCYF@35493,3KS5K@4447
Cds size1782
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9459.30992.1prot_Ecto-sp8_S_contig9459.30992.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9459 1412..7187 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145303.6987844-CDS-Ecto-sp8_S_contig9459:1411..15161681145303.6987844-CDS-Ecto-sp8_S_contig9459:1411..1516Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 1412..1516 +
1681145303.714877-CDS-Ecto-sp8_S_contig9459:2084..21871681145303.714877-CDS-Ecto-sp8_S_contig9459:2084..2187Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 2085..2187 +
1681145303.7289083-CDS-Ecto-sp8_S_contig9459:2876..29701681145303.7289083-CDS-Ecto-sp8_S_contig9459:2876..2970Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 2877..2970 +
1681145303.7402356-CDS-Ecto-sp8_S_contig9459:3663..38071681145303.7402356-CDS-Ecto-sp8_S_contig9459:3663..3807Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 3664..3807 +
1681145303.751881-CDS-Ecto-sp8_S_contig9459:4573..49341681145303.751881-CDS-Ecto-sp8_S_contig9459:4573..4934Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 4574..4934 +
1681145303.7643242-CDS-Ecto-sp8_S_contig9459:5546..61731681145303.7643242-CDS-Ecto-sp8_S_contig9459:5546..6173Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 5547..6173 +
1681145303.777228-CDS-Ecto-sp8_S_contig9459:6839..71871681145303.777228-CDS-Ecto-sp8_S_contig9459:6839..7187Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9459 6840..7187 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9459.30992.1

>prot_Ecto-sp8_S_contig9459.30992.1 ID=prot_Ecto-sp8_S_contig9459.30992.1|Name=mRNA_Ecto-sp8_S_contig9459.30992.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=594bp
KYPAFQATPHTITDLLELNSDFLLEEGEGQLADVTAIVIASPSLEAQLEA
LLVSTVQPCQVKGKKGRGGLAGGGGRGGGGDGRFFDVKTGMFQLSMQADT
TFIWLMEPDVLPGSRFLYLLMHVSTVKDMAGVYGSEGGVMPAAQTRHRSD
TSASFDRGATTPFALWDTPTSSARHQEQEHRHLSDAADAVPSGEEAAAGA
PRIPVDGDEGGGVALGLGGAAGSGTAVSVLSPADVLFSQWFLHKDLVRLL
FREKWAGVASGNGGKGGPAALALSYSLRRYAGVPSYVLPSDPALPEYSGN
MSAGLPPGKLDVQGISKAAEAAAVAAGFARRKKTFRRRTRDALDQSRRRL
ARVGAVGDSDPDQSRRRLGSLASPSDRNSRSLQAVSGGLGDASARGDTDG
SPSSLARRLDERQLRAQFRDLSARGGQFFRTAGHSPEDLVLIVVDGRDQA
EMLGPLYREIVEGGGAAASGGAEVFIVLITHGPDNVEDETSPQQQQQETL
GASPVRTTARRDCREVAEALGVSPSKTPADGGGSNNNNAGRSKTGGGNGD
MNHAIQRPRGLGEVFGEGKGEGETRWDQLTRWLGGKAQGSDEMR
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mRNA from alignment at Ecto-sp8_S_contig9459:1412..7187+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9459.30992.1 ID=mRNA_Ecto-sp8_S_contig9459.30992.1|Name=mRNA_Ecto-sp8_S_contig9459.30992.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5776bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9459:1412..7187+ (Ectocarpus species8 EcLAC_412)
AAATACCCCGCGTTCCAGGCGACGCCCCACACAATCACGGACCTTTTGGA
GCTCAATTCAGACTTCTTGCTGGAGGAAGGCGAAGGCCAGCTCGCAGACG
TGACGGTGATTTTTACACAGGGGGGCTTTTTCTCGCTGGGTGGTGAAGCG
GCTGGTTTTGTGTGCCTGAGAGCGCGGCAGTAGTGTGGTATCTCTCGCTC
CTTCTAGAAGGTTTGAGCTGGGTGTATTCGACGGTGCCCCCGATCAGAGG
ATCGATGTGCCTGAGTTGAGACAAGGCTACCATCGTCATGAATCTTGGTG
GCTTTGCGCGGTGTTGACAAAAGAAGGTGGGCTTCCGAAAAAACCAGGCG
TTTTGACCAGCGAATGCTTAGGAGAAGGTGGTCTACCACCGTAGCTGACA
GCAACGTGCCTGCGCAAAATCGTTTTCGGCAGTTGCTGACACGCAAGAAA
ACTCTGGGTGTGGCAATGCTCTACGGTAAACAGAGTTGGTCGTGCTGTTG
GGGGGCCGAAGACGGCAGCGACATTGGCTAGGGTGCGTCATCGTGCCGCC
ATGAATGATGGCGGCGGTGCTCTGATAATCAGCTGTGCGACCGGTCGACG
CTCGTCCTCTTGCCTATTGCGCCCGGTGTTGTCGCCTGACTCGTTGCTTT
TGTTTTCTGACGCACTCTCTCAGGCGATAGTTATTGCATCTCCGTCGCTG
GAGGCGCAATTGGAGGCGTTGTTGGTCAGTACCGTCCAACCCTGTCAGGT
GAAGGGCAAGAAGGGGAGGGGGGGGCGTGCTCTTATGTTTTGCGTGCCTT
AGCGGCTAGACCATTGACTACGCGTCTTCGAGAGGACGGAACATGGTTCT
CACAGGACCGATCACCGATACATAGCCCATCGTTCCTTCCCACTGTAGTT
TGCAATAGGTGGCTCAAAAATGTTTTCCCTAGTCTATCTATCCTATCGTT
TAAGTGGGGGGGTAAGTTTACAGCCTTGAGAGCACCTTGGAAACCCAGAC
ATGTCGTAGGCTGAGTGGTTGGCTTGCGCTATACAGGGAGAAAAGGCTGG
CACCACGATCAATTTTGCTGAGTGCCGTTCAGGAGTTTGCTTGAGCACTT
GCCGGGGAAAGCTTTGGTTGGAAGGAGGCATGGTTTGTGCCCGTCCCTTG
AGGCCAGCGTACTGCGGTAGCATTAACTCTTTCGGCGGCCCGTCGAGATT
ATCCCCAAAAGTAAACAGAGAACAACGGCAATTGGGTTATTAAGTGAGAG
TACGACAGCGTTCAACTCTGCTTCGGTGGCCTACCCCTGCCCCCCCCCTA
CCTCACCCCTCCCCGTCCCCCCTGACCCTCAGGTGTGGGTGGCGATGCCC
GCGATGGAGACAGCAGAAAACCTCGCGGTGACGAGCACCTATCAGAAGAG
CAGCCGGTTCGGTAAACGCCTTCATCTCGTGAAATCCGACCTCTTCTCCG
ACGGGGCCCCCGGAGTGGCCGGGGGGGGGGGGCGTGGCGGCGGGGGAGAT
GGAAGATTTTTCGACGTGAAAACCGGAATGTTTCAGCTGTCGATGCAAGC
CGACACCACGTACGTCAGTCGCCCTGCACTCGTTGTATGTAGGCCTTTTT
TTCGTGATGTACGGGGCTGGTTTAGTTGGTGATTTCTGGCTTGGGACTAG
ACTGTACGCAACTTGAAAGTTGGTTGGTTTTAGTGGCGGCAGTGTGGGGT
GTGCGTTCCTCTAACGAATGCTGGGGTGGTTGTTGTGTTGAGGTAGGTGG
TCGTGTTGTTGTTGCTGTTGTGTGTTGTTGTTGTCTTCACATTCGAATTA
TCTCTGGCTCCCAAGGCAAAGAAACTACTTTTCCGTCATCACAAGCTATG
TTCCAAAACGAGGTGCAACTATAGCCAAAATAAGGTACAGATATCCCAAG
GGCCCCCGAGCAAGTCTGACCATTCGCGAAGAACGAAGGATCCGTGTGTA
GAAAGCGTTGGTGATTGTCGTGGAAAAATCTTGGCATGATTCTCTCGTGG
GGCTAGAGAATGGTCTGTTCCTTTGGCTTTATTATTTCTCGGGGTTACTT
GCACACCATGCCGGAGACCCCCGCAGTTCGATGAGATCATCATTTTTGAC
GCGATTCCACACCATTTGATCATACAAGCCCCCCCCCCCCCTCATGAGTA
CGCCCCTCCCCCTTGACTCCAGACACTCGTCTCCTTAAGCTCGCATCCCT
GGGTGAATTTTCCTCCGTCTTGACATCCCGCGACGCCCTAATGGTGACTC
AGGTTCATCTGGTTGATGGAACCTGACGTGCTGCCTGGCTCGAGGTTCCT
GTACCTTCTCATGCACGTCTCTACGGTTAAGGACATGGCGGGAGTGTACG
GCAGCGAGGGAGGCGTGATGCCCGCCGCGCAAACGCGACATCGAAGGTAC
TACACATTGTGGTGTAATAGTTTGTCATTTATGCCTTTTCTTTGAGTTTG
GTGCCGGCGTGTCTACCAAGATCGGTTGTGCGTCAAGTAACCACCCTTCC
CTCTCGGTCGTACACGCATAGGTTACATTGTGGTGCTTTTAGTTTGTTTT
ATCGTGGTGGTGCTTTTTCTTCGAGTTGGGGTGACGGTGTGTCTACCAAG
GTCGGTTGTGCGGCAAATATCCACCTTCCACGTTCGCTCGCGGTCTGACA
CGTACGCGCCTTTTTTATTTATTGTTTTGCGACCTATGCTTCAATAGTTG
GCGTTTTTTTGCCGAAAAGTGTCCCCTGTGTTCGTTTCTACCTCCGTTGC
ATGGCATTTGTTCTGCCCACCCTAGTCGTTTTTGTCAAAGCAAGAGTCAA
TTCCCTACCTGAACCCCGCCCCCCCCCCCCCCCCCTCGTGGTGCTTGCCT
TGGAATGGAAATGTTGTAGTTTCTCTACAGTAGGTGCCCATGTAGTAATC
AGGCTTGCCCCTTTGCTCGCCGACGTTCAGGAAGTTGCCTCTATGTTGGG
AATCTTCCAACCTCCTGCAAATCGAGTCGTGCCAAACTTAGGCATGCATG
AGTAACTGTCACCCTCTCACCGGTACAGTACAGGTCAACGAACATCGACA
CCGCCTATTATAGCCAATCGTGCCAACCGCTTGTAAGAAGAAGTAAGTAT
GAGTGCTGGTGTACGACCCCCAATTCCCGCATGTGTGGTGATTACCACAC
GTCGACGAACAGCGATACAAGCGCCTCCTTCGACCGAGGGGCGACGACCC
CGTTCGCCCTGTGGGATACCCCGACCTCCTCCGCACGGCATCAAGAACAA
GAACACCGACACCTGTCCGACGCCGCCGACGCCGTTCCTTCGGGCGAAGA
AGCAGCAGCGGGGGCCCCGCGGATACCAGTCGACGGCGACGAGGGCGGGG
GGGTGGCGTTGGGTTTGGGGGGAGCGGCGGGGTCGGGCACGGCTGTGTCG
GTGCTGTCTCCCGCGGACGTGCTGTTTTCGCAGTGGTTCCTTCACAAGGA
CCTCGTAAGGCTTCTCTTCCGAGAGAAGTGGGCGGGGGTGGCGTCCGGGA
ACGGGGGCAAGGGCGGGCCTGCGGTGAGAGATAGTTTTGTTCAGCGCTCA
CGTGTGTTGTGCTGTGCCCGGCTTTGCATGCCGTATTATTTATGCTCGGT
GAGAGATAGTGTTTTTTAGCGCTCCCGTGTGTGTGCACATGAGTTCGTAG
TGCGCGCTCGCTGTGCCGTTTCATGACTGGAGGAGCATGCCGTGCTTTTG
CTTCCGCCCGCTTGTCAGTCGCTTGCTAGTCGAGGCTACCACCACCACGC
CTTGTGTTTTTTTGCTACATATGCTGGTTCTTTTGCAGATCGGTGTTGTG
CACGCGTGAGAAAGTAACGGTTGTTATAAGTGGGGCAGAGGGATGGGGTT
GTTGGTGCGTCGCGTCGCAGTGTTTGGCGTGACGTGCGTCTCGGTCAGTT
TGTGTGCGGTTTCGATGTAGAGGTGCGGCTCAGCCTCCTCTTGTCGCCTC
TGAACGATCGCGCTTGCGTCTACCCTCTTGCCCCTTGTCTCTCTTTTCGG
CGGGTTCCTCTTCTGTCTGTCTGTCGGTCGGTCGGTCTTCCTGTTTGTGT
GCCCGTCTCTCTCTCTCTCTCTCTCTCCCTCTTTCTCGCCCCCCCGCCCC
TCTCTCTCCTCCGCTCCCTCACCTGGCTTCCACAGGCGCTCGCCCTCTCG
TACAGCCTGAGGCGGTACGCCGGCGTCCCAAGCTACGTGCTACCCTCGGA
CCCTGCCCTCCCAGAGTACAGCGGGAACATGTCAGCCGGGCTGCCCCCCG
GCAAGCTTGACGTCCAGGGTATCAGCAAAGCAGCAGAAGCAGCCGCGGTA
GCAGCGGGCTTCGCTCGCCGAAAGAAAACGTTCCGGCGGCGGACCAGAGA
CGCCCTCGATCAATCGAGGAGAAGGCTAGCCAGAGTCGGCGCTGTTGGTG
ATTCTGATCCCGATCAGTCGAGGCGAAGACTGGGCAGCCTCGCGTCGCCA
TCGGACCGAAACTCGAGATCGTTACAGGCGGTCAGCGGCGGCCTCGGCGA
TGCTTCCGCTAGAGGAGACACCGACGGTTCGCCCTCCTCGCTTGCGCGGC
GGCTGGACGAACGGCAGCTGCGGGCGCAGTTTCGAGACCTCTCGGCGAGG
GGGGGTCAGTTCTTCCGAACCGCCGGCCACTCCCCCGAGGACCTGGTGCT
CATCGTGGTGGACGGCCGGGACCAGGCGGAGATGCTTGGGCCTCTCTACC
GGGAGATCGTGGAGGGGGGCGGGGCTGCCGCTTCGGGTGGCGCAGAGGTG
TTCATCGTTTTGGTGAGTTTTTTGGGGGGGGGTTATAGTTTGCGGGGTAC
TCGTGTTTTTGCATGGTCTAGCTGTTGGCGTCGTTTCACGGGGGGTGGGG
TGGGGGGTTGGGGGGGGGGGTGTACTCATAGTCATGCATGCCGTAGCCGT
TAGACCATTGACTTCGCATCCCTGTAAAGCCGGGACGGAGCACGCCGGGG
TTGGGGTTAAGTTTGGTTGTATTGCAAATGTATTCCAGCACGCACGCACT
CACGCGGTGTCGTGAAAAAAATTGTGGGTGTTCTACCCCCTACTGGAGTT
TCTCAAACCCATTGCTCGCACATTGGGAGTCGTAACACTGAAGCGTGTTT
TGTCTGAACAAAGAGGTCAGGGACATCCATGACAGCGAAAACGATCTGGG
AGGTTGGCGAGGCTCGAACCAGTTCTGCTTCGAGCGAGTGCGCTATTTTT
GTGTGTTTTGTGTTTCGTGACGTGGGCACTGGATGACGTGGGGCCCTTGA
CCGCCTGAAACTATGTACGCGTCCACTAGTCGACCAATAGTACTGACAAG
CATTCTTTCCTTGGCAGTACTTTTCCAGCTAAACTGGAGATAAAAAACGT
GGGTGTATGTGTCCCACACGCTGGCACACGCGCCGTATGATCTGACTCCC
CCAACACACGCGTGGTTCCGCAACACAGATAACGCATGGCCCCGACAATG
TCGAAGATGAGACATCCCCACAGCAACAGCAGCAGGAGACTCTTGGAGCC
TCCCCTGTGCGGACGACAGCTCGCCGCGACTGCAGAGAGGTAGCCGAGGC
ACTAGGTGTGTCCCCGTCGAAGACGCCAGCAGACGGCGGCGGCAGCAACA
ACAACAACGCCGGTCGAAGCAAAACGGGTGGGGGTAACGGGGACATGAAC
CACGCAATACAGCGACCCAGGGGGCTCGGCGAAGTGTTCGGCGAGGGGAA
GGGGGAGGGAGAGACGAGGTGGGACCAGCTTACCAGGTGGCTGGGTGGCA
AGGCGCAAGGGTCGGACGAGATGAGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9459:1412..7187+

>mRNA_Ecto-sp8_S_contig9459.30992.1 ID=mRNA_Ecto-sp8_S_contig9459.30992.1|Name=mRNA_Ecto-sp8_S_contig9459.30992.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1782bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9459:1412..7187+ (Ectocarpus species8 EcLAC_412)
AAATACCCCGCGTTCCAGGCGACGCCCCACACAATCACGGACCTTTTGGA
GCTCAATTCAGACTTCTTGCTGGAGGAAGGCGAAGGCCAGCTCGCAGACG
TGACGGCGATAGTTATTGCATCTCCGTCGCTGGAGGCGCAATTGGAGGCG
TTGTTGGTCAGTACCGTCCAACCCTGTCAGGTGAAGGGCAAGAAGGGGAG
GGGGGGGCTGGCCGGGGGGGGGGGGCGTGGCGGCGGGGGAGATGGAAGAT
TTTTCGACGTGAAAACCGGAATGTTTCAGCTGTCGATGCAAGCCGACACC
ACGTTCATCTGGTTGATGGAACCTGACGTGCTGCCTGGCTCGAGGTTCCT
GTACCTTCTCATGCACGTCTCTACGGTTAAGGACATGGCGGGAGTGTACG
GCAGCGAGGGAGGCGTGATGCCCGCCGCGCAAACGCGACATCGAAGCGAT
ACAAGCGCCTCCTTCGACCGAGGGGCGACGACCCCGTTCGCCCTGTGGGA
TACCCCGACCTCCTCCGCACGGCATCAAGAACAAGAACACCGACACCTGT
CCGACGCCGCCGACGCCGTTCCTTCGGGCGAAGAAGCAGCAGCGGGGGCC
CCGCGGATACCAGTCGACGGCGACGAGGGCGGGGGGGTGGCGTTGGGTTT
GGGGGGAGCGGCGGGGTCGGGCACGGCTGTGTCGGTGCTGTCTCCCGCGG
ACGTGCTGTTTTCGCAGTGGTTCCTTCACAAGGACCTCGTAAGGCTTCTC
TTCCGAGAGAAGTGGGCGGGGGTGGCGTCCGGGAACGGGGGCAAGGGCGG
GCCTGCGGCGCTCGCCCTCTCGTACAGCCTGAGGCGGTACGCCGGCGTCC
CAAGCTACGTGCTACCCTCGGACCCTGCCCTCCCAGAGTACAGCGGGAAC
ATGTCAGCCGGGCTGCCCCCCGGCAAGCTTGACGTCCAGGGTATCAGCAA
AGCAGCAGAAGCAGCCGCGGTAGCAGCGGGCTTCGCTCGCCGAAAGAAAA
CGTTCCGGCGGCGGACCAGAGACGCCCTCGATCAATCGAGGAGAAGGCTA
GCCAGAGTCGGCGCTGTTGGTGATTCTGATCCCGATCAGTCGAGGCGAAG
ACTGGGCAGCCTCGCGTCGCCATCGGACCGAAACTCGAGATCGTTACAGG
CGGTCAGCGGCGGCCTCGGCGATGCTTCCGCTAGAGGAGACACCGACGGT
TCGCCCTCCTCGCTTGCGCGGCGGCTGGACGAACGGCAGCTGCGGGCGCA
GTTTCGAGACCTCTCGGCGAGGGGGGGTCAGTTCTTCCGAACCGCCGGCC
ACTCCCCCGAGGACCTGGTGCTCATCGTGGTGGACGGCCGGGACCAGGCG
GAGATGCTTGGGCCTCTCTACCGGGAGATCGTGGAGGGGGGCGGGGCTGC
CGCTTCGGGTGGCGCAGAGGTGTTCATCGTTTTGATAACGCATGGCCCCG
ACAATGTCGAAGATGAGACATCCCCACAGCAACAGCAGCAGGAGACTCTT
GGAGCCTCCCCTGTGCGGACGACAGCTCGCCGCGACTGCAGAGAGGTAGC
CGAGGCACTAGGTGTGTCCCCGTCGAAGACGCCAGCAGACGGCGGCGGCA
GCAACAACAACAACGCCGGTCGAAGCAAAACGGGTGGGGGTAACGGGGAC
ATGAACCACGCAATACAGCGACCCAGGGGGCTCGGCGAAGTGTTCGGCGA
GGGGAAGGGGGAGGGAGAGACGAGGTGGGACCAGCTTACCAGGTGGCTGG
GTGGCAAGGCGCAAGGGTCGGACGAGATGAGA
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