prot_Ecto-sp8_S_contig9452.30982.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9452.30982.1
Unique Nameprot_Ecto-sp8_S_contig9452.30982.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9452.30982.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 8.690e-54
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0 
Query:    1 MLGWINKKIATAGAGGGTXXXXXXGNERGGRASTDDSGKSQKRNDPQRDLPANPPRQQGQPGRRGSFFDAMGGAMTIGRGGGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI 118
            MLGWINKKIATAGAGG  XXXXXX NERG RASTD SGKSQKRNDPQRDLPANPP+QQGQPGRR SFFDAMGGAMTIGRGGGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI
Sbjct:    1 MLGWINKKIATAGAGGXXXXXXXXXNERGERASTDGSGKSQKRNDPQRDLPANPPQQQGQPGRRSSFFDAMGGAMTIGRGGGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI 118
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BLAST of mRNA_Ecto-sp8_S_contig9452.30982.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 7.400e-48
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MLGWINKKIATAGAGGGTXXXXXXGNERGGRASTDDSGKSQKRNDPQRDLPANPPRQQGQPGRRGSFFDAMGGAMTIGRGGGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI 118
            MLGWINKKIATAG+G   XXXXXX NERG  ASTD SGKSQK +DPQR  PANPP+Q+GQPGRRGSFFDAMGGAMTIGR GGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI
Sbjct:    1 MLGWINKKIATAGSGXXXXXXXXXXNERGXGASTDGSGKSQKHHDPQRGPPANPPQQRGQPGRRGSFFDAMGGAMTIGRSGGRGKKDDKSEAAALAEQLDAQRAERISCVAFKLVREI 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9452.30982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI42_ECTSI8.690e-5494.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE7.400e-4887.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9452contigEcto-sp8_S_contig9452:6876..7229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9452.30982.1mRNA_Ecto-sp8_S_contig9452.30982.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9452 6218..7229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9452.30982.1 ID=prot_Ecto-sp8_S_contig9452.30982.1|Name=mRNA_Ecto-sp8_S_contig9452.30982.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=118bp
MLGWINKKIATAGAGGGTGSGQGGGNERGGRASTDDSGKSQKRNDPQRDL
PANPPRQQGQPGRRGSFFDAMGGAMTIGRGGGRGKKDDKSEAAALAEQLD
AQRAERISCVAFKLVREI
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