prot_Ecto-sp8_S_contig9402.30906.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9402.30906.1
Unique Nameprot_Ecto-sp8_S_contig9402.30906.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length100
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9402.30906.1 vs. uniprot
Match: D8LS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS79_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 5.230e-20
Identity = 82/106 (77.36%), Postives = 83/106 (78.30%), Query Frame = 0 
Query:    1 DESADNDEPADDDAWADGXXXXXXXXXXXXXXXXX-------SSPXXXXXXXXXAXEENDDLGPDSGDTSGAVGTFAAPSRSSSAASLWGALYCIVLVVTDALAGI 99
            DESADN   AD DAWAD XXXXXXXXXXXXXXXXX       SSP XXXX    A EENDDLGPDSGD SGA  TFAAPSRSSSA SLWGALYCIVLVV+DALA I
Sbjct:  176 DESADNXXXADGDAWADDXXXXXXXXXXXXXXXXXXXXXXXDSSPSXXXXGSQSADEENDDLGPDSGDNSGAAWTFAAPSRSSSAVSLWGALYCIVLVVSDALARI 281
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BLAST of mRNA_Ecto-sp8_S_contig9402.30906.1 vs. uniprot
Match: A0A6H5L2W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.070e-17
Identity = 48/64 (75.00%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:   36 SSPXXXXXXXXXAXEENDDLGPDSGDTSGAVGTFAAPSRSSSAASLWGALYCIVLVVTDALAGI 99
            SSP         A EENDDLGPDSGDTSGA+GTFAA SR+SSAA LWGAL CIVLVVTDALA I
Sbjct:  240 SSPSEDDDGSQSADEENDDLGPDSGDTSGAIGTFAALSRASSAAFLWGALCCIVLVVTDALARI 303
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9402.30906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS79_ECTSI5.230e-2077.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W4_9PHAE4.070e-1775.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9402contigEcto-sp8_S_contig9402:2775..3074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9402.30906.1mRNA_Ecto-sp8_S_contig9402.30906.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9402 2775..3102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9402.30906.1 ID=prot_Ecto-sp8_S_contig9402.30906.1|Name=mRNA_Ecto-sp8_S_contig9402.30906.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=100bp
DESADNDEPADDDAWADGDDTWADDDDTWADDDDDSSPSEDDDGSQSADE
ENDDLGPDSGDTSGAVGTFAAPSRSSSAASLWGALYCIVLVVTDALAGI*
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