prot_Ecto-sp8_S_contig9398.30897.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9398.30897.1
Unique Nameprot_Ecto-sp8_S_contig9398.30897.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length162
Homology
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: D8LLP4_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP4_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 9.310e-75
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0
Query:    1 MGNKESSHSSTFLRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLRDNSLGEVPAAVL 162
            MGNKESSHSSTF RGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGL EIPEGLFTLVKLRTLNMAS   XXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTD+SAGSN+LAGAGALGALPACLKKLVLRDN LGEVPAAVL
Sbjct:    1 MGNKESSHSSTFSRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEIPEGLFTLVKLRTLNMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDVSAGSNQLAGAGALGALPACLKKLVLRDNRLGEVPAAVL 162          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A7S2PXK3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXK3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.060e-10
Identity = 44/131 (33.59%), Postives = 64/131 (48.85%), Query Frame = 0
Query:   35 KNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXX-IPDLSALSSLTDISAGSNRLAGAG--ALGALPACLKKLVLRDNSLGEVPAAVL 162
            KNKTG+KV +QK++ A  T +L+L EH L EIPE +F L  LRTL+++ N L                          I  +S L+ L  +S G NRL      +   LP+ +K L +  NS   +P  ++
Sbjct:   23 KNKTGKKVVSQKIENAKKTNILSLTEHKLEEIPEEVFHLTSLRTLDISKNKLQRLGNIGRLTELKTLNCDDNSLHSSAIAPISKLAKLQSLSLGKNRLEDPANQSFPTLPSKIKTLKIHHNSFSSIPKQIV 153          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A7S2HXS7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HXS7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 9.040e-10
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0
Query:   31 GSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXX----IPDLSALSSLTDISAGSNRLAGAGAL-------------GALPACLKKLVLRDNSLGEVPAAV 161
            GS PKNKTG+KV  QK++ +  TGVL+L+EH L+ IP  +F +  L +L++++N+L                             +  +S L+ L ++SAGSN+L     L               LP+ LK + L +NS   +P  +
Sbjct:    5 GSQPKNKTGKKVLTQKLENSKKTGVLSLREHKLDTIPNQVFDITNLTSLDVSTNNLKTLGEPTKISKLSNLKSFNCEDNKLQAGTLSSISTLTKLQNLSAGSNQLGKPLVLVVDEQRKTIESLPNTLPSSLKSIKLDNNSFSAIPPQI 152          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A6T7I766_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7I766_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.050e-8
Identity = 68/142 (47.89%), Postives = 86/142 (60.56%), Query Frame = 0
Query:   32 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXX--IPDLSALSSLTDISAGSNRLA----------GAGALGALPACLKKLVLRDNSLGEVPAAV 161
            S P N+TG+ V  QK++ A  TGVL+LQEH L EIPE +F LV +RTL++     XXXXXXXXXXXXXXXXXXXXXX     +  +++L+ L  +SAG N+L               L  LP  LK+L L  N L  VP  +
Sbjct:    6 STPTNRTGKDVVRQKVENAQKTGVLSLQEHKLEEIPEKVFRLVNIRTLDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLQAGSLAPVTSLNKLQTLSAGGNQLGKPVVIQGQTKSPNVLPKLPPSLKQLKLDFNFLSNVPKQI 147          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A067D9M8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D9M8_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 3.340e-8
Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   38 TGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLRDNSLGEVP 158
            T + V A K++ A ATG+L+L    L  IP+ +F + KL TL++++N LXXXXXXXXXXXXXXXXXXXXXXXXX+PDLSAL+ LT++   +N+LA    L ALP  L KL  R+N L  +P
Sbjct:   17 TKKSVQATKIERAKATGILSLHGCKLKRIPDDVFGIEKLNTLDLSNNELXXXXXXXXXXXXXXXXXXXXXXXXXLPDLSALTKLTNLVLDNNKLA---TLQALPMGLTKLSARNNQLLALP 134          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A7S4R369_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R369_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.210e-8
Identity = 26/56 (46.43%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   31 GSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSL 86
            GS PKN+TG+KV  QK++ A  TG+L+L+EH L++IP+ +F +  L +L++++N+L
Sbjct:   44 GSQPKNQTGKKVVVQKLENAKKTGILSLREHKLDKIPDQVFDITNLTSLDVSNNNL 99          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A6A3P9A0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P9A0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.350e-8
Identity = 69/128 (53.91%), Postives = 78/128 (60.94%), Query Frame = 0
Query:   35 KNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLRDNSLGEVPAAVL 162
            K KTGR V  QK+K+A ATGVLAL    L ++PE L  L  LRT        XXXXXXXXXXXXXXXXXXXXXX   +PDLS L +LT +   SN L       ALP  L KL ++ N L  VP  VL
Sbjct:   18 KPKTGRSVQQQKLKSAKATGVLALPNSKLKKLPEELLELSALRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTTLPDLSGLEALTTLVLDSNTLEDIP--NALPPNLTKLSIKGNKLRAVPRTVL 143          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: H3GRI1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GRI1_PHYRM)

HSP 1 Score: 60.5 bits (145), Expect = 6.900e-8
Identity = 69/131 (52.67%), Postives = 82/131 (62.60%), Query Frame = 0
Query:   32 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLRDNSLGEVPAAVL 162
            S PKN   R V  QK+++A ATGVLAL    L ++PE L  L  LRTL++     XXXXXXXXXXXXXXXXXXXXX    +PDLSAL +LT +    N L    +  ALP  L KL L+ N L  VP +VL
Sbjct:   17 SKPKNN--RSVQQQKLRSAKATGVLALPNSKLKKLPEELLELSTLRTLDLXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTLPDLSALEALTTLVLDGNLLEDIPS--ALPPNLTKLSLKGNRLRAVPRSVL 143          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A6A3UTM1_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UTM1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.450e-7
Identity = 68/128 (53.12%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   35 KNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLRDNSLGEVPAAVL 162
            K KTGR V  QK+K+A ATGVLAL    L ++PE L  L  +RT        XXXXXXXXXXXXXXXXXXXXXXX  +PDLS L +LT +    N L       ALP  L KL ++ N L  VP +VL
Sbjct:   18 KPKTGRSVQQQKLKSAKATGVLALPNSKLKKLPEELLELSAMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLPDLSGLEALTTLVLDCNMLEDIP--NALPPNLTKLSIKGNKLRAVPRSVL 143          
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Match: A0A662XQF7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQF7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.560e-7
Identity = 71/136 (52.21%), Postives = 88/136 (64.71%), Query Frame = 0
Query:   32 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDISAGSNRLAGAG-AL----GALPACLKKLVLRDNSLGEVPAAVL 162
            S PKN  G  V  QK++TA ATGVLAL +  L ++P+ LFTL  LR+L+      XXXXXXXXXXXXXXXXXXXXXX   +PDLSAL++LT +     +L   G AL     ALP  L KL L+ N L  VP +++
Sbjct:   21 SKPKNSRG--VQQQKLRTARATGVLALPDSKLKKLPDELFTLSALRSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATLPDLSALTALTTVRVLCLKLVLDGNALEDLPNALPPNLTKLSLKGNRLRTVPHSIV 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9398.30897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LLP4_ECTSI9.310e-7595.06Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
A0A7S2PXK3_9STRA3.060e-1033.59Hypothetical protein (Fragment) n=2 Tax=Skeletonem... [more]
A0A7S2HXS7_9STRA9.040e-1030.41Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6T7I766_9STRA2.050e-847.89Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A067D9M8_SAPPC3.340e-855.37Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A7S4R369_9STRA5.210e-846.43Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A6A3P9A0_9STRA5.350e-853.91Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GRI1_PHYRM6.900e-852.67Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A6A3UTM1_9STRA2.450e-753.13Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A662XQF7_9STRA3.560e-752.21Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 73..95
e-value: 44.0
score: 8.0
coord: 96..118
e-value: 2.4
score: 17.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 56..109
e-value: 3.5E-7
score: 29.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 98..119
score: 8.282
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 75..96
score: 5.61
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 143..162
score: 4.662
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..161
e-value: 7.8E-20
score: 72.9
NoneNo IPR availablePANTHERPTHR16083:SF18coord: 56..161
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 56..161
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 55..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9398contigEcto-sp8_S_contig9398:5230..7253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9398.30897.1mRNA_Ecto-sp8_S_contig9398.30897.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9398 5230..7253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9398.30897.1 ID=prot_Ecto-sp8_S_contig9398.30897.1|Name=mRNA_Ecto-sp8_S_contig9398.30897.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=162bp
MGNKESSHSSTFLRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTA
GATGVLALQEHGLNEIPEGLFTLVKLRTLNMASNSLKLLPAAMSTLTKLK
ILRLDSNKLEAIPDLSALSSLTDISAGSNRLAGAGALGALPACLKKLVLR
DNSLGEVPAAVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf