prot_Ecto-sp8_S_contig934.30801.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig934.30801.1
Unique Nameprot_Ecto-sp8_S_contig934.30801.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length227
Homology
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BLAST of mRNA_Ecto-sp8_S_contig934.30801.1 vs. uniprot
Match: A0A6H5JSE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE9_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.420e-42
Identity = 109/179 (60.89%), Postives = 111/179 (62.01%), Query Frame = 0 
Query:   42 GTTAPGTEMEIDDPPAATPAQSKKRRRGDGPEEDPSAGAVEKASGESDASMVIEVGGAGAQESERDSRRPGPDTPKPLEDPKVGEVVSQDLATQEIKRVRXXXXXXXXXXXXXXXXXXXXXXGVPENGVTPAEQQXXXXXXXPNGGGKAEGEEKSVLGETGKEGAPVGGSEPQIAGSKG 220
            GT A G EMEID             RR DGPEEDPSAGAVEKASGESDASMVIE GGAGAQESERDSRRPGP+TPKPLEDPKV EVVSQDLATQEIKR                                   QQ       PNGGGKAEGEEKS LG+ GKE    GGSEPQ AGSKG
Sbjct:  272 GTAALGMEMEIDXXXXXXXXXXXXXRREDGPEEDPSAGAVEKASGESDASMVIEAGGAGAQESERDSRRPGPETPKPLEDPKVDEVVSQDLATQEIKR----------------------------------RQQPR-----PNGGGKAEGEEKSGLGKLGKERTSAGGSEPQTAGSKG 411
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BLAST of mRNA_Ecto-sp8_S_contig934.30801.1 vs. uniprot
Match: D8LMT8_ECTSI (Internalin protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT8_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 1.990e-34
Identity = 76/84 (90.48%), Postives = 76/84 (90.48%), Query Frame = 0 
Query:   41 AGTTAPGTEMEIDDPPAATPAQSKKRRRGDGPEEDPSAGAVEKASGESDASMVIEVGGAGAQESERDSRRPGPDTPKPLEDPKV 124
            AGTTAPGTEMEIDDPPAATPAQS      DGPEEDPSAGAVEKASGESDASMVIE GGAGAQESERDSRRPGPDTPKPLEDPK 
Sbjct:  304 AGTTAPGTEMEIDDPPAATPAQSXXXXXEDGPEEDPSAGAVEKASGESDASMVIEAGGAGAQESERDSRRPGPDTPKPLEDPKA 387
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig934.30801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSE9_9PHAE2.420e-4260.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMT8_ECTSI1.990e-3490.48Internalin protein n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig934contigEcto-sp8_S_contig934:1751..2708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig934.30801.1mRNA_Ecto-sp8_S_contig934.30801.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig934 1751..2708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig934.30801.1 ID=prot_Ecto-sp8_S_contig934.30801.1|Name=mRNA_Ecto-sp8_S_contig934.30801.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=227bp
SKEATEGPKEATEGSKEATEGSKEATEGSKEATEDPKEATAGTTAPGTEM
EIDDPPAATPAQSKKRRRGDGPEEDPSAGAVEKASGESDASMVIEVGGAG
AQESERDSRRPGPDTPKPLEDPKVGEVVSQDLATQEIKRVRRTESSPSPP
AAAAAAAVAAGVDGVPENGVTPAEQQQQPQQPQPNGGGKAEGEEKSVLGE
TGKEGAPVGGSEPQIAGSKGDGQGKED
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