prot_Ecto-sp8_S_contig92444.30652.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92444.30652.1
Unique Nameprot_Ecto-sp8_S_contig92444.30652.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length65
Homology
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BLAST of mRNA_Ecto-sp8_S_contig92444.30652.1 vs. uniprot
Match: D7G563_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G563_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.840e-11
Identity = 35/65 (53.85%), Postives = 37/65 (56.92%), Query Frame = 0 
Query:    5 MAHTTPRISNLLQIVLYQQNVPPPYDTCCNAVPLATWIR-----SNARSAAQREGFCSGCLPPSW 64
            MAHTTPRISNLLQIVLYQQNV            +A + R              EGFCSGCLPPSW
Sbjct:    1 MAHTTPRISNLLQIVLYQQNV----------TLVAMFFRLLLGLDQMLGLRPNEGFCSGCLPPSW 55
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92444.30652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G563_ECTSI1.840e-1153.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92444contigEcto-sp8_S_contig92444:327..521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92444.30652.1mRNA_Ecto-sp8_S_contig92444.30652.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92444 215..618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92444.30652.1 ID=prot_Ecto-sp8_S_contig92444.30652.1|Name=mRNA_Ecto-sp8_S_contig92444.30652.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=65bp
MLPKMAHTTPRISNLLQIVLYQQNVPPPYDTCCNAVPLATWIRSNARSAA
QREGFCSGCLPPSW*
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