prot_Ecto-sp8_S_contig92424.30646.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92424.30646.1
Unique Nameprot_Ecto-sp8_S_contig92424.30646.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length35
Homology
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BLAST of mRNA_Ecto-sp8_S_contig92424.30646.1 vs. uniprot
Match: A0A1L3I505_9RHOB (Uncharacterized protein n=1 Tax=Phaeobacter porticola TaxID=1844006 RepID=A0A1L3I505_9RHOB)

HSP 1 Score: 52.8 bits (125), Expect = 8.450e-8
Identity = 26/36 (72.22%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    1 GRPSIV-WIKDFQLTQNAGGALPVRIQNGHCYATLV 35
            G PSIV W KDFQLTQN GGALP   QNGH Y +LV
Sbjct:    2 GAPSIVFWFKDFQLTQNGGGALPDGFQNGHRYTSLV 37
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92424.30646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1L3I505_9RHOB8.450e-872.22Uncharacterized protein n=1 Tax=Phaeobacter portic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92424contigEcto-sp8_S_contig92424:512..616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92424.30646.1mRNA_Ecto-sp8_S_contig92424.30646.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92424 512..616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92424.30646.1 ID=prot_Ecto-sp8_S_contig92424.30646.1|Name=mRNA_Ecto-sp8_S_contig92424.30646.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=35bp
GRPSIVWIKDFQLTQNAGGALPVRIQNGHCYATLV
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