prot_Ecto-sp8_S_contig924.30636.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig924.30636.1
Unique Nameprot_Ecto-sp8_S_contig924.30636.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: A0A6H5JCA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA8_9PHAE)

HSP 1 Score: 538 bits (1387), Expect = 5.050e-188
Identity = 278/302 (92.05%), Postives = 285/302 (94.37%), Query Frame = 0
Query:    3 MHSACGGNPRQAGRRKRRATSAAVKERPLLLFTLISIVARGGWATEEGVRTAAGSDGVAGGRNRGDSGVPGTYGSVGEAAAGTGVSFLGVAAVGDAEDASARVRGGDYASHAPADSRVGHGVGGRTDAAGGDGPHLQTKQESASMQSLRGRRARGGGEGGREQKEGRLYESENHARRLPEITVGTVGESFDVRENGASAGSQEQALTEGTLATPPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDSRVAKLEEASIGLGAYWDLSELCM 304
            MHSACGGNPRQ GR KRRA SA VKERPLLLFTLISIVARGGWA EEGVRTA GSDGVAGG NRGDSGV GTYGS+GEA AG GVSFL VAAVGDAEDASARVRGGDYAS+APADSRVGHG+ GRTDAAGGDGPH QTKQ+S S QSLRGRRARGGG+GGREQKEGRLYESENHAR+LPEITVGTVGESFDVRENGASAG QEQALTEGTLATPP WDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKD+RVAKLEEASIGLGAYWDLSELCM
Sbjct:    1 MHSACGGNPRQTGRHKRRAVSAVVKERPLLLFTLISIVARGGWAAEEGVRTAVGSDGVAGGSNRGDSGVAGTYGSIGEATAGAGVSFLDVAAVGDAEDASARVRGGDYASYAPADSRVGHGISGRTDAAGGDGPHPQTKQKSPSWQSLRGRRARGGGDGGREQKEGRLYESENHARQLPEITVGTVGESFDVRENGASAGPQEQALTEGTLATPPAWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDARVAKLEEASIGLGAYWDLSELCM 302          
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: D8LN55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN55_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 8.940e-112
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0
Query:  129 DAAGGDGPHLQTKQESASMQSLRGRRARGGGEGGREQKEGRLYESENHARRLPEITVGTVGESFDVRENGASAGSQEQALTEGTLATPPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDSRVAKLEEASIGLGAYWDLSELCM 304
            DAAGGDGPHLQTKQESA +QSLRGRRARGGGEGGREQKEGRLYESENHAR LPEITVGTVGESFDVRENGASAG QEQ LTEGTLATPP WDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLV+DGIFMAKALGRTFVEYPVKD+RVAKLE+ASIGLGAYWDLSELCM
Sbjct:    2 DAAGGDGPHLQTKQESAPLQSLRGRRARGGGEGGREQKEGRLYESENHARHLPEITVGTVGESFDVRENGASAGPQEQPLTEGTLATPPAWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVTDGIFMAKALGRTFVEYPVKDARVAKLEDASIGLGAYWDLSELCM 177          
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: D8LFR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR0_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.440e-26
Identity = 49/88 (55.68%), Postives = 67/88 (76.14%), Query Frame = 0
Query:  216 PPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDSRVAKLEEASIGLGAYWDLSELC 303
            PP W S  CM  WGVP L  EPDP GY+++VNGREQLG N++L+SDG+++AK L RT VE+PV ++R+++ + + +G GAYWDL  LC
Sbjct:  121 PPEWGSAGCMKRWGVPWLLTEPDPAGYIIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRAD-SDLGFGAYWDLDSLC 207          
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: A0A6H5KP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP62_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 4.280e-25
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  216 PPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDSRVAKLEEASIGLGAYWDLSELC 303
            PP W S  CM  WGVP L  EPDP GY+++VNGREQLG N++L+SDG+++AK L RT VE+PV ++R+++ + + +G GAYW L  LC
Sbjct:  119 PPEWSSADCMKRWGVPWLLTEPDPAGYLIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRAD-SDLGFGAYWGLDSLC 205          
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: D7G2V8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 4.520e-6
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  193 DVRENGASAGSQEQALTEGTLAT--PPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNG 248
            + R   ++A  +     EG  +T  PP WDS+ CM  WGVPELQ E DP GY+++  G
Sbjct:   67 EARSGDSTAALEGVQQAEGRRSTNIPPRWDSSTCMESWGVPELQTEVDPGGYLLFSEG 124          
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Match: A0A6H5JD38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD38_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.170e-5
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0
Query:  193 DVRENGASAGSQEQALTEGTLAT--PPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGR 249
            + R   ++A  +     EG  +T  PP WDS+ CM  WGVPELQ E DP GY+++  GR
Sbjct:   51 EARSGDSTAALEGVQQVEGRRSTNIPPRWDSSTCMESWGVPELQTEVDPGGYLLFSEGR 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig924.30636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JCA8_9PHAE5.050e-18892.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN55_ECTSI8.940e-11294.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFR0_ECTSI3.440e-2655.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP62_9PHAE4.280e-2554.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V8_ECTSI4.520e-643.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD38_9PHAE1.170e-544.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 31..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 42..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig924contigEcto-sp8_S_contig924:482..4805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig924.30636.1mRNA_Ecto-sp8_S_contig924.30636.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig924 482..4805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig924.30636.1 ID=prot_Ecto-sp8_S_contig924.30636.1|Name=mRNA_Ecto-sp8_S_contig924.30636.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=305bp
MAMHSACGGNPRQAGRRKRRATSAAVKERPLLLFTLISIVARGGWATEEG
VRTAAGSDGVAGGRNRGDSGVPGTYGSVGEAAAGTGVSFLGVAAVGDAED
ASARVRGGDYASHAPADSRVGHGVGGRTDAAGGDGPHLQTKQESASMQSL
RGRRARGGGEGGREQKEGRLYESENHARRLPEITVGTVGESFDVRENGAS
AGSQEQALTEGTLATPPTWDSTLCMAHWGVPELQDEPDPNGYVVYVNGRE
QLGGNKFLVSDGIFMAKALGRTFVEYPVKDSRVAKLEEASIGLGAYWDLS
ELCM*
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