prot_Ecto-sp8_S_contig91912.30547.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig91912.30547.1
Unique Nameprot_Ecto-sp8_S_contig91912.30547.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length160
Homology
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BLAST of mRNA_Ecto-sp8_S_contig91912.30547.1 vs. uniprot
Match: UPI000C7879C4 (uncharacterized protein LOC111704149 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7879C4)

HSP 1 Score: 174 bits (440), Expect = 3.570e-52
Identity = 86/173 (49.71%), Postives = 115/173 (66.47%), Query Frame = 0 
Query:    1 MDIKTKDEFIFFMQRACEDTCNDCYIELYNILLRAFISADCDFDGQVSEDEFEGMIAAANEFPKKFGFEWW-AGSGKDQ----------FRAIDENGDE--RTEFVKSCKDSANTGSDSYKKIYWFSWKCFQAADADRDGQVSGSEFATMINVATSGQKRLGLPAPFQTSADQ 160
            MD+  KD+F FFM+RA   + +DCYIELYN+LLR+F++AD DFDG+VS DEF+ MI AA    +KFG++WW      D+          F  IDEN D   R + +  CK      +  Y+++YWF W+CFQAADADRDG VSG EF  MI++ATS QKRLG+  PFQ++ ++
Sbjct:    1 MDLANKDDFTFFMRRALTSSDDDCYIELYNLLLRSFVAADVDFDGKVSVDEFDSMIEAAAALLRKFGYQWWDEAKCPDEATRKTVRAALFTKIDENNDGVMRRKRICVCKKCTEPNTPEYRRLYWFHWQCFQAADADRDGMVSGDEFNKMIDMATSAQKRLGMETPFQSTEER 173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91912.30547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000C7879C43.570e-5249.71uncharacterized protein LOC111704149 n=1 Tax=Euryt... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 116..141
e-value: 8.9
score: 10.1
coord: 31..59
e-value: 1.6
score: 16.0
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 117..137
e-value: 1.4E-5
score: 24.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 27..62
score: 8.265
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 116..144
score: 9.632
NoneNo IPR availableGENE3D1.10.238.10coord: 27..150
e-value: 3.8E-9
score: 38.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 122..134
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 31..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig91912contigEcto-sp8_S_contig91912:53..616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig91912.30547.1mRNA_Ecto-sp8_S_contig91912.30547.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig91912 53..616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig91912.30547.1 ID=prot_Ecto-sp8_S_contig91912.30547.1|Name=mRNA_Ecto-sp8_S_contig91912.30547.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=160bp
MDIKTKDEFIFFMQRACEDTCNDCYIELYNILLRAFISADCDFDGQVSED
EFEGMIAAANEFPKKFGFEWWAGSGKDQFRAIDENGDERTEFVKSCKDSA
NTGSDSYKKIYWFSWKCFQAADADRDGQVSGSEFATMINVATSGQKRLGL
PAPFQTSADQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair