mRNA_Ecto-sp8_S_contig10185.305.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10185.305.1
Unique NamemRNA_Ecto-sp8_S_contig10185.305.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: D7G388_ECTSI (S-adenosyl-L-methionine-dependent methyltransferases-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G388_ECTSI)

HSP 1 Score: 704 bits (1816), Expect = 1.580e-250
Identity = 362/378 (95.77%), Postives = 366/378 (96.83%), Query Frame = 3
Query:  132 KHGPTSPATAGFVALPARTSAASDELRLPVRSKRIPTAKTSLPGRLCLSAAADAPATGASSSVKEDEKRAAVKSALLGVFGESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVGNT----VGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRATKRAE 1253
            KHGP SPATAGFVALPARTSAAS ELRLPVRSKRIPTAK SLPGRLCLSAAADA ATGAS SVKEDEKRAAVKSALLGVFGE+VKDGDEGQATPGDPILACPSTLGDLTDGVR YGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRL SEYFSSTGAD KAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAV+GNT    VGNSRRRDGFKFFELAELEQLMRNAGFEDV+VVKEGRACAIVRATK+AE
Sbjct:   94 KHGPASPATAGFVALPARTSAASHELRLPVRSKRIPTAKNSLPGRLCLSAAADAAATGASPSVKEDEKRAAVKSALLGVFGETVKDGDEGQATPGDPILACPSTLGDLTDGVRWYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLASEYFSSTGADGKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVLGNTAGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVKVVKEGRACAIVRATKQAE 471          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A6H5JNE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE8_9PHAE)

HSP 1 Score: 520 bits (1339), Expect = 6.240e-179
Identity = 281/329 (85.41%), Postives = 284/329 (86.32%), Query Frame = 3
Query:   33 MPRAPTTKMTVLAVLXXXXXXXXXXXXXXXXXGKHGPTSPATAGFVALPARTSAASDELRLPVRSKRIPTAKTSLPGRLCLSAAADAPATGASSSVKEDEKRAAVKSALLGVFGESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEE 1019
            MP  P TKMTVLAVL                 GKHGPTSPATAGFVALPARTSA SDE RLPVRSKRIPTAKTSLPGRL LSAAADAPATGASSSVKEDEKRAAVKSALLGVFGESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGG+GPGSLLVA+KSS+KRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEG FQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGAD KAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREE LGAPELIR  V R P   E  DGV       C S L E
Sbjct:    1 MPPPPKTKMTVLAVLLAAGCSSPAVAVASAGGGKHGPTSPATAGFVALPARTSAVSDEPRLPVRSKRIPTAKTSLPGRLYLSAAADAPATGASSSVKEDEKRAAVKSALLGVFGESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGGMGPGSLLVAFKSSNKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGQFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADGKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEGLGAPELIR-HVRRQPAAVE--DGVPRRRPRGCGSALLE 326          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A835YU37_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU37_9STRA)

HSP 1 Score: 286 bits (731), Expect = 3.360e-88
Identity = 154/303 (50.83%), Postives = 201/303 (66.34%), Query Frame = 3
Query:  342 AVKSALLGVFGESVKDGDEGQATPG--DPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRATK 1244
            AVK  LL +FG S     +  A  G  D +LA P+    + + VR +G   P   L     +D R      + T+FV   +  K  W LSR E + EGTFQ+PLVS++YERGWRQ F+ANGFPGID+EF  V+E+FS        V+DLSCGSGLM RRLV S RY RVI GDLSP+ML E A+RF +  L  PE +RCDVS+LP+++ S+DG+HAGAALHCW++LE  L EV+RVLKPG  F+A+TFL +A    T+     ++G+KFF ++ELE+ MR AGFE V V++ GRACA++R  K
Sbjct:   12 AVKGKLLEIFGVS---NPQNAAAAGEYDEVLASPAGAKPVREAVRLFG---PAGALRYMIDADGRRWRSNGVYTDFV--GDDAKAPWDLSRSERIMEGTFQSPLVSFVYERGWRQAFNANGFPGIDKEFEEVAEFFSPVQGPSSVVMDLSCGSGLMTRRLVKSNRYGRVIAGDLSPSMLGEAAQRFDKAGLTRPEFLRCDVSQLPIQSGSVDGLHAGAALHCWTQLEAGLREVYRVLKPGGRFYASTFLVAA----TINTPLNQNGYKFFTVSELERYMREAGFETVTVMQSGRACALIRCVK 302          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A8J6CAS6_DIALT (Methyltransf_25 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAS6_DIALT)

HSP 1 Score: 248 bits (632), Expect = 4.970e-74
Identity = 136/287 (47.39%), Postives = 175/287 (60.98%), Query Frame = 3
Query:  417 DPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEP-------------LKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRA 1238
            DP+LA P T   L    R    +G  ++ +AY+  D   G  Y     +VD   P             +    +  +     +  F+ P VSW YERGWRQ F+ANGFPGID+EF  V  +F+   A    V+D+SCGSGLM RRL +SG Y RVIG D S +MLAETARRFREE +  P+L+RCDV+ LP+++ SL+ VHAGAALHCW   E  + E+ RVLKPG  FFATTFL +A++G      R   GF+ FEL EL  ++R+AGF DV+V + GRACAI RA
Sbjct:   31 DPVLASPRTGAPL---FRERTVLGR-TVQLAYREEDG--GRLYRDNGAYVDLTPPGPDPTPDELLNSLMTAAAAFVQPAQFGQSLFRNPAVSWAYERGWRQNFNANGFPGIDQEFEEVQAFFAPV-AQRGVVLDMSCGSGLMTRRLAASGAYRRVIGADYSESMLAETARRFREEGMAVPDLVRCDVAALPVQSASLNAVHAGAALHCWPDAERGVGEIRRVLKPGGAFFATTFLTAALIGTRRAGGRTGAGFRVFELDELRGMLRDAGFVDVDVRQAGRACAICRA 310          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: I2CP90_NANGC (Methyltransf_11 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP90_NANGC)

HSP 1 Score: 222 bits (565), Expect = 2.500e-63
Identity = 142/331 (42.90%), Postives = 183/331 (55.29%), Query Frame = 3
Query:  312 SSVKEDEKRAAVKSALLGVFG-ESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSL---SRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYF---SSTGADVK------------AVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTF-LNSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRATK 1244
            S +   E R  +K AL    G E+      G     + +LACP TL  L   VR  G  G    +V  +      G KYP    ++D   P++    +   S    V +  F++PL S+LYERGWR  F   GFPGIDEEFR +  +F   S  G++ +             VIDLSCGSGLM RRL  S ++ RVI  D S +ML ET RRF EE L  PEL+R D SR P +T S+D +HAGAALHCW +LEESL E  RVLKPG   +A+TF +N  +  NT         F+FF+L EL +L  ++GF +VEV +EG AC IV+A K
Sbjct:   65 SPIDAHELRGVLKDALYRSLGNEATTSSRAGNYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTR------GNKYPANEVYMDLV-PVEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLMARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNT---------FRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVK 379          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A0G4F2A9_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2A9_VITBC)

HSP 1 Score: 225 bits (574), Expect = 8.960e-63
Identity = 128/295 (43.39%), Postives = 168/295 (56.95%), Query Frame = 3
Query:  375 ESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAE---PLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVG-NTVGNSRRRDGFKFFE-LAELEQLMRNAGFEDVEVVKEGRACAIVRATK 1244
            E   +G    AT  + +LA P  L  LT+  R        +L+V      KR   +YP+   +VD        +P W  S  E VK   F+ PL+S++YERG+RQ F+  GFPGID+E+  +  +FS         +DLSCG G M RRLV SGR+ RVI  D S  ML ET   F  E +  PEL+RCDV+RLP  TES+D +HAGAA+HCW  LEESL EV+R LKPG  F+ATTF      G N  G + R+  F +F  + EL+  ++ AGFE V+V + GR C I +  K
Sbjct:   79 EISSNGGNEPATGKESVLADPVALEPLTEYERVVN-----NLVVRGYRKAKRYSCRYPVNPIYVDLVPREVSERPVWQQSVSELVKTQNFRNPLLSFVYERGYRQNFARAGFPGIDKEWAEIQPFFSPNEGPSSVALDLSCGPGFMARRLVKSGRFGRVIAADFSEAMLTETWGGFVREGIQRPELVRCDVARLPFMTESIDVIHAGAAMHCWPSLEESLYEVYRALKPGGRFYATTFKVGGWTGSNGFGLAARQTSFFYFSSVNELKTYLKRAGFETVDVRQVGRGCLIAKCIK 368          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A836C9V0_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 8.640e-61
Identity = 116/234 (49.57%), Postives = 142/234 (60.68%), Query Frame = 3
Query:  561 FVDFAEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRF----REEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRATKRA 1250
            ++DF    K  W LS    +KEG F  P+ S+LYERGWRQ F+  G PGI+ EF  V+++F         V DLSCGSGLM RRLV S RY R+IGGDLS  ML E ARR     R       + +R DVSRLP+ TES+D VHAGAALHCW  LE SLSEV+R LKPG  F+A+TFL S ++     +      F+ F   EL  L+  AGFE V+V   G+AC I +  K A
Sbjct:   33 YIDFVGSQKAPWQLSGEARLKEGLFMLPVTSFLYERGWRQQFNKFGCPGIETEFDEVTQFFEPVQGPDAVVADLSCGSGLMTRRLVFSNRYGRIIGGDLSAAMLREAARRLSRCRRPGSATTVDWVRLDVSRLPIATESVDAVHAGAALHCWVDLEASLSEVYRTLKPGGRFYASTFLLSDLMSGVASS------FRCFTRDELAYLLEQAGFESVDVQTYGKACVIAKCIKSA 260          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A7S0LPR2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LPR2_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 2.300e-59
Identity = 132/295 (44.75%), Postives = 170/295 (57.63%), Query Frame = 3
Query:  405 ATPGDPILACPSTLGDLTDGVRSYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKE-----------GTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAP--ELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVVGNTVGNSRRRDG--FKFFELAE-LEQLMRNAGF--EDVEVVKEGRACAIVR 1235
            A+ GD +LACP T G L   V   G     S+    K S +  GV+YP+  E+ D  E       LS  E   E             F++P+ SWLYERGWRQ F+  GFPGI+ E+  V+E+F+     V  V+D+SCGSGLM RR++SS R+ RV+  D S TML ET RR    DL     EL R DV+ LPL+T+S+D +HAGAALH W +LE  LSE+ RVLKPG  FFATTFL  A      G      G  F+FF   E L  L+ +AGF  + ++V +EGR CA++R
Sbjct:   39 ASDGDSVLACPRTKGPLQSEVSVIG-----SIKRENKVSPE--GVRYPV-REYNDLLESSSRNTDLSVDELRDEIASLWSTRTQTQLFRSPVTSWLYERGWRQNFANAGFPGIEREYEEVAEFFAPLAGGV--VVDMSCGSGLMSRRILSSRRFGRVLALDYSETMLRETRRRTIAADLPVQDLELCRADVANLPLQTDSIDAMHAGAALHSWPQLELGLSEIVRVLKPGGRFFATTFLQGAYGVRVPGTEGASSGGSFRFFRSEEELTSLLVDAGFPRDAIQVRREGRGCAVIR 323          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A6U4MM50_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4MM50_HEMAN)

HSP 1 Score: 210 bits (534), Expect = 3.500e-59
Identity = 104/217 (47.93%), Postives = 144/217 (66.36%), Query Frame = 3
Query:  609 GEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFL-----NSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIVRATK 1244
            G  +++  F+TP+VSW+YERGWR  F   GFPGI++EF LV E+F       K VIDLSCGSGLM+RR  SS RY++VI  D S +ML E  +R  EE+  + +++R DV+++P    ++D +H+GAALHCW  +++ LSEVHRVL+PG  FFATTFL         +G  + +   R  ++FF   EL+ LM+ AGF +VEV +  R CAI+R TK
Sbjct:  142 GRPLRQELFRTPMVSWMYERGWRNSFKQAGFPGIEKEFELVQEFFEDKAN--KTVIDLSCGSGLMVRRFASSERYAKVIAVDFSESMLGEVVKRAEEENCPSFDVVRADVAKMPFADNAVDAIHSGAALHCWPSVQDGLSEVHRVLQPGGRFFATTFLWGVPDELVSLGENLSSPAGRRAYRFFSPDELKWLMKGAGFSEVEVEQVER-CAIIRCTK 355          
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Match: A0A7S3AFB3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AFB3_9EUKA)

HSP 1 Score: 204 bits (519), Expect = 1.790e-58
Identity = 114/229 (49.78%), Postives = 147/229 (64.19%), Query Frame = 3
Query:  576 EPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRC--DVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFLNSAVV---GNTVGNSRRRDGFKFFELAELEQLMRNAGF--EDVEVVKEGRACAIVRAT 1241
            + L   WS       + G F++P  ++LYERGWRQGF+  GFPGI++E+     +F      +   +D+SCGSGLM RRL+SS  + RV+  D S  ML ET RR REE L    L  C  DV+ LPL T+S+D +HAGAALHCW +L+E LSE+ RVLKP   FFATTFL  A      N +G S   +GF+FFEL EL +L+  AGF  ++VEV KEG+ CAIV+AT
Sbjct:    4 QELTDAWS----SRTQTGLFRSPFTAFLYERGWRQGFANAGFPGIEKEYEEAIAFFEPAYGGI--AVDMSCGSGLMTRRLMSSEHFQRVLALDYSEAMLTETRRRIREEKLPTEALTLCRADVAALPLATDSVDAMHAGAALHCWPRLDEGLSEISRVLKPNGRFFATTFLKGAYGLPRDNPMG-SGGSNGFRFFELDELRELLIAAGFPADNVEVRKEGQGCAIVKAT 225          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10185.305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G388_ECTSI1.580e-25095.77S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6H5JNE8_9PHAE6.240e-17985.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU37_9STRA3.360e-8850.83S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A8J6CAS6_DIALT4.970e-7447.39Methyltransf_25 domain-containing protein n=1 Tax=... [more]
I2CP90_NANGC2.500e-6342.90Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A0G4F2A9_VITBC8.960e-6343.39Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A836C9V0_9STRA8.640e-6149.57S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S0LPR2_9EUKA2.300e-5944.75Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6U4MM50_HEMAN3.500e-5947.93Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S3AFB3_9EUKA1.790e-5849.78Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10185contigEcto-sp8_S_contig10185:571..6673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score708.4
Seed ortholog evalue2e-201
Seed eggNOG ortholog2880.D7G388
Model size1706
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0010287,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0080167
Exons9
EggNOG free text desc.response to karrikin
EggNOG OGs2QPQG@2759,COG2226@1
Cds size1224
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10185.305.1prot_Ecto-sp8_S_contig10185.305.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10185 603..6223 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143116.4698436-UTR-Ecto-sp8_S_contig10185:570..6021681143116.4698436-UTR-Ecto-sp8_S_contig10185:570..602Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10185 571..602 +
1681143116.5856092-UTR-Ecto-sp8_S_contig10185:6223..66731681143116.5856092-UTR-Ecto-sp8_S_contig10185:6223..6673Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10185 6224..6673 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143116.4862428-CDS-Ecto-sp8_S_contig10185:602..7741681143116.4862428-CDS-Ecto-sp8_S_contig10185:602..774Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 603..774 +
1681143116.4987366-CDS-Ecto-sp8_S_contig10185:989..11621681143116.4987366-CDS-Ecto-sp8_S_contig10185:989..1162Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 990..1162 +
1681143116.5116613-CDS-Ecto-sp8_S_contig10185:2032..21971681143116.5116613-CDS-Ecto-sp8_S_contig10185:2032..2197Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 2033..2197 +
1681143116.527454-CDS-Ecto-sp8_S_contig10185:2969..31551681143116.527454-CDS-Ecto-sp8_S_contig10185:2969..3155Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 2970..3155 +
1681143116.540006-CDS-Ecto-sp8_S_contig10185:3632..37331681143116.540006-CDS-Ecto-sp8_S_contig10185:3632..3733Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 3633..3733 +
1681143116.5494437-CDS-Ecto-sp8_S_contig10185:4236..43351681143116.5494437-CDS-Ecto-sp8_S_contig10185:4236..4335Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 4237..4335 +
1681143116.5586312-CDS-Ecto-sp8_S_contig10185:5155..53111681143116.5586312-CDS-Ecto-sp8_S_contig10185:5155..5311Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 5156..5311 +
1681143116.5676677-CDS-Ecto-sp8_S_contig10185:5739..58541681143116.5676677-CDS-Ecto-sp8_S_contig10185:5739..5854Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 5740..5854 +
1681143116.5768147-CDS-Ecto-sp8_S_contig10185:6166..62231681143116.5768147-CDS-Ecto-sp8_S_contig10185:6166..6223Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10185 6167..6223 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10185.305.1

>prot_Ecto-sp8_S_contig10185.305.1 ID=prot_Ecto-sp8_S_contig10185.305.1|Name=mRNA_Ecto-sp8_S_contig10185.305.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=408bp
MPRAPTTKMTVLAVLLAAACSSPAVAAASAGGGKHGPTSPATAGFVALPA
RTSAASDELRLPVRSKRIPTAKTSLPGRLCLSAAADAPATGASSSVKEDE
KRAAVKSALLGVFGESVKDGDEGQATPGDPILACPSTLGDLTDGVRSYGG
VGPGSLLVAYKSSDKRPGVKYPIGTEFVDFAEPLKPTWSLSRGEAVKEGT
FQTPLVSWLYERGWRQGFSANGFPGIDEEFRLVSEYFSSTGADVKAVIDL
SCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRC
DVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTFL
NSAVVGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVEVVKEGRACAIV
RATKRAE*
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mRNA from alignment at Ecto-sp8_S_contig10185:571..6673+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10185.305.1 ID=mRNA_Ecto-sp8_S_contig10185.305.1|Name=mRNA_Ecto-sp8_S_contig10185.305.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6103bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10185:571..6673+ (Ectocarpus species8 EcLAC_412)
AGTAGCGTGTGGCGGCGACAGCAACAACCAGGATGCCGCGCGCCCCCACG ACAAAGATGACCGTTCTTGCGGTGCTCCTCGCCGCGGCGTGCTCCTCTCC TGCCGTAGCTGCCGCCTCCGCCGGCGGTGGCAAACACGGGCCGACCTCTC CCGCCACCGCCGGGTTCGTTGCCCTTCCCGCGAGAACGTCCGCAGCATCA GACGGTGAGAGATGAGCGGACCCGTCGTTGTTTGTTCGTTTTTTTGGTGC TCGGGATGGATGGATGGCGGAGATGCGACCAGACTATTAATAGGTGTCTT TTCCTCTGACACGGCAGCTCCCAAAACGTGGGGACCGTTGCAACCGTGTT GCATTGCAACCGTGTGGTTGATACCTGGACCTTGCCCCTCCCTGCGTGTC GTCCTCCCGGTGCCGACAGAGCTGAGATTACCCGTGAGGTCGAAAAGAAT ACCAACGGCAAAAACCTCGCTGCCGGGGAGGCTTTGTTTGTCGGCAGCTG CCGACGCCCCGGCGACGGGGGCGTCGTCGTCCGTGAAGGAGGACGAGAAG AGGGCGGCCGTCAAGTCCGCCCTGCTGGGCGTGTTCGGAGAGGTGCGGCG AAACACGATGCAGCGAACCTTGAGCCTTGAGTCGGGTCGTTACGAGCAAA ACTTGAGTAGTCACTCCGTTGGTTGTTGCCGTTATGCGGCCGTGGATGTA TTTTTCCGCTCCCGGAGACACCTTCCCCGCTAGGGTAAGCGGGAACAGTG CAAGCCCCGTACACTGCGAGTGAGGAGTGGGTTTGTTGATCACCGAACCG ACGCTGTGGCGATACCTAATGCTGCGGCAATGGACACGTGCACTTGCTGG ATATGCCACGAGCACTGCCAGCATTTGAAAGTGTGGTCTGACAGCTGGCG GCACCTCTTGCGCCCTTTGGGCGGGCGGGCTACGGGAGACATGGACAGCT GGCGTTCCCGACAACCCTTTATCCTGTCTCCAATCATATGGGTTGGTTCC TCGGTTTTCCGTCTCCATTCACATGACACCATCACCTTCGACCCCATCGT CGTCCCAAAGTCGGTTTTGTGCAGGGAACTATGTACGTTATTTTTTGTGT TCTACTCCTCTTGATCGCTCCATACGGGCTGGTTAGCGGCAGCCCCCCAA CCCTCTTTCTGAAGGAGACTTGCTTGGGGCTCGACTCGTGCGTCTTCATA CATATATATTGCTGGACGGACGTTCCCAACTATCAACCAAGCCTTACGAT CGTGACTACCATTGTTTCATTTCGATACTCCGCCCTGAACATTACTTTTG CTTTTTTTTTTGCGCGGGGCAATCGACGATGGTGAATGACAAGGACTATC TTGCCGCAGAACGCTACCTTCTGCCCTGCCTCTCCACACTCAAAATATCC ACCATCCCTGCCTGTCTGGGTATCCCTCCCGCCCTCCAACAACACGTTTT TGTTTGTATCAGAGCGTTAAGGATGGCGATGAGGGCCAAGCGACACCAGG CGACCCGATTCTGGCGTGCCCGTCGACTCTTGGTGACCTCACCGATGGCG TTCGATCGTACGGAGGCGTGGGGCCGGGTTCGTTGCTCGTTGCGTACAAG TCCTCGGATAAGAGGCCAGGCGTGAAGGTGAGACGGCAGCCCTTTGGCCG GCGGAGGTTGGAGAGATGAGATGAAGAAGGGCGTCGGAACACAACACCCC CTTTCCAACGCTACAACTCGTGGTATCGCTGTTGAGTGGTTCTTTGTTTG GTGTGAGAGGACGATTGGAAGCCGCTTTTCCTCAAATAAAACGAATCTGT TCCCGCTGTTTTGCTATCTGTTGAAGGGTTTGTTTTTTTTTGCGTGAGAA CCCTCGGAAATACGGTGTGACAAACGTTGGTTATGGGTGTCAGGGAAACA ACGTATACGAAACACAAGAGCAGTTCTCTGATCGGTGCTGTTTGGAAGTG CGAAAGAAGTTTAGGCGGGCGGTCGTTGAGTATCAAATGCATCCCGAGAG CGCCCCTTCATTGTTAACCCCCGGCGTGGGTTGAAGGCACGCATCAATCA CAACACGTCATGTCTCGCATGCTTCGATTGGTGTTCCGGGTCATTGCTAG TTTTGTACGCGCGCGCGAGAGAGAGGTCTGCAAGAACTGGCGAATGAGGC ACAAAGGGTCTTGCACGGTTCGTGCCCGTGCCGGCAGGGGCTGTCCACGA GTCGGCCTGTGTCGTCTTGTGCTCATCCTCTTCACAACCATGCCGAAAAG AAATCGGTCGGTAGGCGTCAGCGTTAACCGTTGCCTGCAGACATAGCAGT GCAACATCGTACTGGTTTACTCCTGTTCCTTGACACCCCATTCCTGCACG CATACACCGCGCTTGACACCGACACCGACACCCGCCGTCCCCGTTCCAGT ACCCGATAGGGACCGAATTCGTCGATTTCGCGGAGCCGCTGAAGCCGACC TGGAGCCTGAGCAGGGGAGAGGCTGTCAAGGAAGGCACGTTTCAGACCCC GCTAGTGTCTTGGCTATACGAGCGCGGCTGGAGGCAAGGGTTCAGCGCCA ACGGCTTCCCCGGGATCGACGAGGAGTTCCGATTGGTGAGGCGTGTTTGC TGTTGCGGGGATGGGGCGGGAGGAGGTTGGTCGATGCTGACGGGCAGTTC GCTCTTGATGTTGGCATCTGCGATTGCTTCGAGATTTTTGTTTTCTGTGG CTACGAAAACGCCTGTATGTCGTGGCAACCGGTTGTCCGTTTTTGGTGAA GATGACTAAACACTCCCCCCATCCTGGGCTACTCCTCACCACTAACTGCA ACGAACCCATACCAAGACGAACATCATAGTCGTCATACATAGGGTGCTCA AGCTAGAGTTAGTCGTTGTCATAACGGCACCGTCGGAGGAAAAGGTGGAG ATTTCCTGCTGGGTAATCCCAGTTCCTGCGTCAAAACATTAACTTCGCAT CACAGAGTACAGACTGGCGCCCAGGATAATTGAGACGCAAAGCAGCTAGA AAGCAAAAGCCCACGTTTGTCACACAATGCTATAACACTATAATACCTTC CGGGGGTCACAGGTGTCCGAGTACTTTTCGAGCACGGGGGCCGACGTTAA GGCGGTGATCGACCTGTCCTGCGGGAGCGGTCTCATGATGCGAAGGCTCG TCTCCTCGGGCAGGTGAACCTTAGTCTTAGTCCTTGCACACCCAGGCAGC AGTTGCGTTGGTTGGTCCTGTTTTAATATTCTATGCCAGCACAGCCGTGG CTCCGATGCAAGAGGGTGGTGTGACAAAGGCCCTCGACCCCCTTAAAATC GGAGCCCCCTCTTGTGCCGGAATTTGAAGGTGCCATCAACGATACTACAG CAGTAGCGGGTCGAGTCCGTGGCAACCGATTCGATTCTCTTCTTCTTGTA TCGGAGCCACCTCTGTAGATGAAAAAACCACGTCTGTCGTTCGTTGTGTT GGATAGGTTTCGCGAGCCTGAACGCATTGTTGTGTCGTGAGGGATGTGAG TTTGCTGCCTAGGGCAGCTAGGCTTACGTTTAGGCACGCCCGTGTGTGAC CCGTCGCCCAGCAGGAGCTTCAGAAAGAGAAATAGACACTCAATCGCCAC GCCACAACCACATATTTAACGCCAAGTGTTTTGGTCCACCCCCTCTTGGT CCACGTTTTTGAGCAGGTACTCCCGTGTCATTGGAGGAGACCTGTCGCCC ACCATGCTGGCTGAAACTGCTCGGCGCTTCAGGGAAGAGGACTTGGGAGC TCCGGAGCTCATCAGGCACGTCCTCCTTGCTGTTTTGACCAGACTATCTC TATTTGTTTCACCCCACCCCGTGCAGAATATCTTTTTCTCACATTTTAAG TCGGGCATTTTCTTTACTTTTTCTGTCACAACGTTTCAAGGATTGGACCC CCGAGCCGCCGAAAAGACGCGCAAAGAGCGTACACCCCAACCGAAGGAAC TTGGCGCTGTATAGGAATTGGCTAACTTGACTGGCTGGCTACTGTTGGAG GCGGCTGCGCAAACCCTAACCATGGTCTCAAAAATATTTATACTTCAAGT ATATAAAATAAATAGATAAATGTATAAATAGATGGTCTCAGTTGTAGTTG TAGCCATTCGATCTTTTTGGGCAAGTACGGCGGTTTGCACGGGTCCGATA CCCCTGAACACGGAGTCTTTGGCATCCCCGCCCACTGCTCCACGGCTCCA GGTGCCTCAAGAAAGATTAGTTCTGCCCGACTAGCTCCCTTCTACCAGGA GGGCAAAGAGCCAGCTGCCCGCAACAGAGTAAACCCTCGCCCTCCAGAGC GAAACCTTCGATCCTCGACTCGCGCGCGCTGCCTCTGTCCCGTGTTGTTT CATCGTTTGACACATACTGCATACAACCTCAGAAAGTGTCCCAAATGAAG GAATGGAGACGTTGGTTTCTTGATTCTTGTCGCAGTCCTACCCGCGGTCC TATGCCACAGCACAGGCGTATAATCACGTATACACACGGCCCTACAGCGC CCTAATAGCTGCAGTTTGGCGTGGCTTGCACGAACGGCTTGTCCCTAATC CTCGAACCCCCAACATGCTTTCAACCGTTTATCAGGTGCGACGTCAGCCG TCTGCCGTTAAAGACGGAGTCTCTCGACGGCGTCCACGCGGGTGCGGCTC TGCACTGCTGGAGTAAGCTGGAAGAGTCGCTGTCGGAGGTACACCGGGTG CTCAAGCCCGGGAGAGGGTTCTTCGCCACAACCTTCCTCAAGTGGGTGTG CCAACAGTCTCCCGATGGATTTGGCGCTCAACAGCATCCGTATGATAGCG CCTTTCAATACGCTCTCTTGGTTGATTGACACAGCCCTTGAGAACGACAC AACGAGAGAGAGAGGGAGGGGGGGGGAGGGGCAGGACTGATTGTAGCTGC GGTTGAAGAACGATTAAGCTCTCTTGGCTGAGTGACCTGGCTCGCCGCCC GGCTGGCTACAATGCCTGTACCATTTCATTTGCTGCTCCGGCGATAGTGG TAGGTCCCGGAGCGGGAGGCTTAAGTGCTCTTCAATACTTGACGTCACCG CTCACTCGGGTACTTTAGTTGTTCTTTTTCTTGCGTCTGCATAGCTTGTA ACTCCTCATACCTGAAAATTTCACCGCACGGCCCTCATTTGTCCCTTCGT TGCCATTGCTCTGTGGCAGTTCTGCTGTCGTTGGAAATACCGTTGGAAAT TCCCGTAGGAGGGATGGGTTCAAGTTCTTCGAACTGGCAGAGCTGGAGCA ATTAATGCGCAACGCCGGTTTCGAAGACGTGGAGGTGGGTCGGGTTAGCA GAGCGAAACTCCAGAGCCGTACGTCTGCTAGTAAACCAATCCTCACGAGT GGCTATTCGTCGCCAAAAAATCCGTTGCGGTTGTCTTGTAGTGCCGGCTT TTTTCTTGCGTCAAGGTGGAGGGAGACCCTGCCTCTCGAAGCACGCACCA CGAACCGAAAGCGCCCCCCCCTCCCCTCTTTTTTCTTTTCGCCTCACTAT CTGAAGACCTACGTGCCATTAATACTCTTTTCCCAACGCAGTGGCTAAAA CTACCTCCTCGTCCTCTCCCCCAACGCTTTGTTCTGCAAACCGCAGGTGG TAAAGGAGGGGCGTGCGTGCGCGATTGTTCGGGCCACCAAACGGGCGGAA TAAGACGTCTCGCAGCAGTTAATGATATGGAACAAGAATACACGCCCAAT CGTTGGTGTTGAGTATGTTGTCAAGTGACATGGCGTCTCTTTATTGTCGG TCGGGACAACGCATTTCCGTCACCCATGGAACCCGGCCGATGCTTCAGAA ACGTAGACGGAAAAGGTGTGTGGGCTGGTGAAAGAATAGACACACGCGTG AATGTGCCGAGGTCTCGAGGTTTTGAGTGTTACTTATCGTGCGAAGATTC CGTTAAGGGTATGAGCTCGTAGTTCTTTGCCACGAGATTTGCCCTTGGTA CAATTTTGATAGAATTTTGAACGGTGTAAAGGCGACCTTATTGGTGGTCG GTGGGTGTGGTGTAGAAAGAACGCGGATTTTTGTTGTAAGAGGACATTGG AGGAAAGGGTCGTAAGTATCGTGGATGCCCGACCATCTGCAACAACTTTG TCG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10185:571..6673+

>mRNA_Ecto-sp8_S_contig10185.305.1 ID=mRNA_Ecto-sp8_S_contig10185.305.1|Name=mRNA_Ecto-sp8_S_contig10185.305.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10185:571..6673+ (Ectocarpus species8 EcLAC_412)
ATGCCGCGCGCCCCCACGACAAAGATGACCGTTCTTGCGGTGCTCCTCGC
CGCGGCGTGCTCCTCTCCTGCCGTAGCTGCCGCCTCCGCCGGCGGTGGCA
AACACGGGCCGACCTCTCCCGCCACCGCCGGGTTCGTTGCCCTTCCCGCG
AGAACGTCCGCAGCATCAGACGAGCTGAGATTACCCGTGAGGTCGAAAAG
AATACCAACGGCAAAAACCTCGCTGCCGGGGAGGCTTTGTTTGTCGGCAG
CTGCCGACGCCCCGGCGACGGGGGCGTCGTCGTCCGTGAAGGAGGACGAG
AAGAGGGCGGCCGTCAAGTCCGCCCTGCTGGGCGTGTTCGGAGAGAGCGT
TAAGGATGGCGATGAGGGCCAAGCGACACCAGGCGACCCGATTCTGGCGT
GCCCGTCGACTCTTGGTGACCTCACCGATGGCGTTCGATCGTACGGAGGC
GTGGGGCCGGGTTCGTTGCTCGTTGCGTACAAGTCCTCGGATAAGAGGCC
AGGCGTGAAGTACCCGATAGGGACCGAATTCGTCGATTTCGCGGAGCCGC
TGAAGCCGACCTGGAGCCTGAGCAGGGGAGAGGCTGTCAAGGAAGGCACG
TTTCAGACCCCGCTAGTGTCTTGGCTATACGAGCGCGGCTGGAGGCAAGG
GTTCAGCGCCAACGGCTTCCCCGGGATCGACGAGGAGTTCCGATTGGTGT
CCGAGTACTTTTCGAGCACGGGGGCCGACGTTAAGGCGGTGATCGACCTG
TCCTGCGGGAGCGGTCTCATGATGCGAAGGCTCGTCTCCTCGGGCAGGTA
CTCCCGTGTCATTGGAGGAGACCTGTCGCCCACCATGCTGGCTGAAACTG
CTCGGCGCTTCAGGGAAGAGGACTTGGGAGCTCCGGAGCTCATCAGGTGC
GACGTCAGCCGTCTGCCGTTAAAGACGGAGTCTCTCGACGGCGTCCACGC
GGGTGCGGCTCTGCACTGCTGGAGTAAGCTGGAAGAGTCGCTGTCGGAGG
TACACCGGGTGCTCAAGCCCGGGAGAGGGTTCTTCGCCACAACCTTCCTC
AATTCTGCTGTCGTTGGAAATACCGTTGGAAATTCCCGTAGGAGGGATGG
GTTCAAGTTCTTCGAACTGGCAGAGCTGGAGCAATTAATGCGCAACGCCG
GTTTCGAAGACGTGGAGGTGGTAAAGGAGGGGCGTGCGTGCGCGATTGTT
CGGGCCACCAAACGGGCGGAATAA
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