prot_Ecto-sp8_S_contig10169.280.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10169.280.1
Unique Nameprot_Ecto-sp8_S_contig10169.280.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length52
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10169.280.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.390e-7
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:    3 STALHAAVYGVHVEAVRALLQAGTNPNSMDVRGWTPLDVACTMFRAAPR 51
            S A+HAAVY   V+++RALL AG +PN+ D  G TPL  AC +F AA R
Sbjct:   83 SPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADR 131
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10169.280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAW5_9PHAE3.390e-755.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..30
e-value: 0.0014
score: 27.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..33
score: 9.751
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..48
e-value: 1.1E-12
score: 49.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..44
NoneNo IPR availablePFAMPF13637Ank_4coord: 3..45
e-value: 3.4E-8
score: 33.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..43
score: 12.832

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10169contigEcto-sp8_S_contig10169:848..1003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10169.280.1mRNA_Ecto-sp8_S_contig10169.280.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10169 848..1003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10169.280.1 ID=prot_Ecto-sp8_S_contig10169.280.1|Name=mRNA_Ecto-sp8_S_contig10169.280.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=52bp
MCSTALHAAVYGVHVEAVRALLQAGTNPNSMDVRGWTPLDVACTMFRAAP
R*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom