prot_Ecto-sp8_S_contig1119.1549.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1119.1549.1
Unique Nameprot_Ecto-sp8_S_contig1119.1549.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length275
Homology
BLAST of mRNA_Ecto-sp8_S_contig1119.1549.1 vs. uniprot
Match: D7G4S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S1_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 2.930e-181
Identity = 266/275 (96.73%), Postives = 270/275 (98.18%), Query Frame = 0
Query:    1 MLLKWNCVSATIGYLLARRQAEAFSVVGFQKPQATACRTRALASSVPASSPTQRILDAAPLRGPSRGLLPLHMLAGGDAVQSSVGTKGEEHSVLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLVSP 275
            M+LKWN VSAT+G+LLARRQAEAFSVVGFQKPQATACRTRALASSVPASSPTQRILDAA LRGPSRGLLP+HMLAGGDAVQSSVGTK EEHSVLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFL  P
Sbjct:    1 MILKWNYVSATVGWLLARRQAEAFSVVGFQKPQATACRTRALASSVPASSPTQRILDAAALRGPSRGLLPMHMLAGGDAVQSSVGTKSEEHSVLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERP 275          
BLAST of mRNA_Ecto-sp8_S_contig1119.1549.1 vs. uniprot
Match: A0A835YR16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR16_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.590e-35
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 0
Query:  119 LCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDA-EGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDG---VRKSILQDRLQL 265
            +CD+  L +L GRI      S E T L  V +EIN+AMQRRL AAD+NLR VL  APD+KKME  +R LFR G+ +MAFMV+++MNL +A++A  GA+ AV +LTHL T IM +QD R+ PE +LLR L+R   D     R+ +L+++L L
Sbjct:    1 MCDYGFLMYLNGRIGEAGPDSEEGTKLSAVAQEINVAMQRRLVAADANLRAVLANAPDLKKMEADLRRLFRTGQADMAFMVVLNMNLAQAREAGPGAEGAVAVLTHLNTAIMEMQDTRVAPEVRLLRMLMRASDDDNAEKRRDLLKEQLDL 151          
BLAST of mRNA_Ecto-sp8_S_contig1119.1549.1 vs. uniprot
Match: D7FSF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.360e-9
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 0
Query:  113 VEEYLDLCDHALLTHLRGRIEAEEAQSPEATA-LKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSIL 259
            VE   D  D   LT L  +  A+EA+  +A A L  + + IN  MQRR+A A   L+++L +  + ++ME  I+ +   G+V+ A ++++  NLQ+A++A+ A  AV +L  L        DE+++PE++L+R LLR      R +IL
Sbjct:   64 VETNYDQVDIQFLTLLNQK--AQEAEGTDAAAALTRLGDSINNTMQRRMAQASERLQKILTVG-NPERMEETIKAMAERGEVDDALVLLLQANLQQAEEAD-AGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNIL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1119.1549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4S1_ECTSI2.930e-18196.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR16_9STRA3.590e-3550.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FSF0_ECTSI2.360e-934.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..275
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1119contigEcto-sp8_S_contig1119:11370..16401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1119.1549.1mRNA_Ecto-sp8_S_contig1119.1549.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1119 11370..16401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1119.1549.1 ID=prot_Ecto-sp8_S_contig1119.1549.1|Name=mRNA_Ecto-sp8_S_contig1119.1549.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=275bp
MLLKWNCVSATIGYLLARRQAEAFSVVGFQKPQATACRTRALASSVPASS
PTQRILDAAPLRGPSRGLLPLHMLAGGDAVQSSVGTKGEEHSVLDALIDQ
FTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEE
EINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVM
ISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTD
CDGVRKSILQDRLQLPNNDVFLVSP
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