mRNA_Ecto-sp8_S_contig1107.1443.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: D8LJY3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY3_ECTSI) HSP 1 Score: 764 bits (1973), Expect = 3.100e-269 Identity = 639/677 (94.39%), Postives = 641/677 (94.68%), Query Frame = 1
Query: 1 MAWRDAADSIRAELNNLELTREDDDVRSSVTVAGKVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQGGGGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGVVAATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRNGVDEDAVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLXXXXXXXXXXXXXXXXXXXXXXXXXXAERVLSECVKTLEARLGAVHEEVAAAKSMLDLCAATE 2031
MAWRDAADSIRAELNNLELTREDDD RSSVTVAGKV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDG EFTVKDAAVLLHGDGSARCGDGMAA XXXXXXXXXXXXXXXXX VLRVLEARGIL STSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDP ALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQGGGG GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEG VAATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXX NRNGVDED+VGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRL XXXXXXXXXXXXXXXXXXXXXXX AERVL ECV+TLEARLGA HEEVAAAKSMLDLCAATE
Sbjct: 1 MAWRDAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAQHGRESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGMAAASAXXXXXXXXXXXXXXXXXRR---VLRVLEARGILTASGGRGGRRKSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPSALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQGGGGDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGGVAATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRNGVDEDSVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLGXXXXXXXXXXXXXXXXXXXXXXXEEAERVLGECVETLEARLGAAHEEVAAAKSMLDLCAATE 674
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 658 bits (1698), Expect = 1.210e-218 Identity = 588/782 (75.19%), Postives = 596/782 (76.21%), Query Frame = 1
Query: 1 MAWRDAADSIRAELNNLELTREDDDVRSSVTVAGKVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAM------------------------------------------------AGRLK---------------EAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR------------------------------------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQGGGGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGVVAATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRNGVDEDAVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLXXXXXXXXXXXXXXXXXXXXXXXXXXAERVLSECVKTLEARLGAVHEEVAAAKSMLDLCAATE 2031
MAWR+AADSIRAELNNLELTREDDD RSSVTVAGKV XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX GRESQRKAILRAGFRDLV VAGDDDSRLLYLSLAVLPDG EFTVKDAAVLLHGDGSARCGDG+ A XXXXXXXXXXXX VLRVLEARGIL S SSPSSFRMHEAHS FAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFR AEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAE GGKPEEAAAWRRYGRETLNLAM A L+ EAE +LRRAL IE AR G DDP+VA TL LGVC+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSS+GGGGG AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEG VAATGAG XXXXXXXXXXXX SNRNGVDED+VGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLXXXXXXXXXXXXXXXXXXXXXXXXX AERVL ECVKTLEARLGA HEEVAAAKSMLD CAATE
Sbjct: 585 MAWRNAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRR-----VLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRETLNLAMVKSTMVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSRGGGGG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGGVAATGAGGARPALSRRSSSGSXXXXXXXXXXXXSSNRNGVDEDSVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLXXXXXXXXXXXXXXXXXXXXXXXXXEAERVLGECVKTLEARLGAGHEEVAAAKSMLDSCAATE 1360
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 183 bits (465), Expect = 6.170e-45 Identity = 134/355 (37.75%), Postives = 179/355 (50.42%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDN-YDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQR---AQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMA--------GRLK--------------------------EAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR 1236
R+++RKAILRAGF DL G DD R+ LYLSLAV PDG FTV+DAAVLL+ C + A+ V+ LE +L S ++RMH+AHS FARE L+D + AV RWV +S L+ + DP+ L LW AVE VGG GW R Y AL +D + L R ++A+A+ + A DW+GAS WRRLL +E++ A +V+ L + AE+ G+ EAA WR E L LA+A G+++ +AE LLRR+L I+EA LG +D VA TL+ LG+CLR
Sbjct: 292 RDARRKAILRAGFEDLA--IGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYD--REPCAEDEASVAV----------------------VVDTLERWTVLR------------SEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLR 608
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 177 bits (449), Expect = 9.080e-43 Identity = 135/353 (38.24%), Postives = 172/353 (48.73%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYD-PLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQ---RAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMA--------------------------------GRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR 1236
R ++R+AIL+AGF DL G DD R+ LYLSLAVLPDG FTVKDAAVLL+ D D + V+ LE I+ S +++RMH+AHS FARE L+D + A+ R V +SSL+A+ + + L LW+ V+ VGG GW RPYE ALEA+D + PL R + AVA F+ A+ DW GA+ WRRLL VE+ A P V+ L AE EEA W R + L LAMA G EAE LLRR+L I+ A L +DD +VA LGVC+R
Sbjct: 459 RVNRRRAILQAGFEDLA--IGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLY-DREPGTEDEASVGG-----------------------VVEALERWTIIR------------SVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIR 773
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 168 bits (425), Expect = 9.270e-40 Identity = 133/349 (38.11%), Postives = 168/349 (48.14%), Query Frame = 1
Query: 301 QRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQR---AQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMA--------------------------------GRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR 1236
+RKAIL+ GF DL G DD R+ LYLSLAV+PDG F++KDAAVLL+ D S D +A V+ VLE I+ S+ ++RMH+AH+ FARE LLD + A+ RW +LSSLD + D + L LW A+E +GG GW RPYE AL + D L R AV F+ A+ D +GAS WRRLL VE+R A P V+ L AE+ G EEAA W E L LA+A G AE LLRR+L ++EA LG + +VA TL LGV R
Sbjct: 439 RRKAILQGGFEDLA--IGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLY-DRSPSTEDEASAGG-----------------------VVDVLERWSIIR------------SAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAR 749
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.970e-39 Identity = 126/354 (35.59%), Postives = 169/354 (47.74%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFD-PFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQR---AQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAM--------AGRLK------------------------EAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRV 1239
R +RKA+L+AGF DL G DD R+ LYLSLAVLPDG FT KDA LL+ A C + + ++R LE L + ++RMH+AHSGFAR+ ++D + AV RW LSSLD + FD PF L LW AV +GG+ WR+ RPY AL +D +PL L ++ F+ A+GDW AS RR+L V++R A P+ + + LV AE+ G EE W+ R L LA+ AG + AE L+R +L I+E +LG DD VA L HLGV + +
Sbjct: 435 RAVRRKAVLQAGFEDLA--IGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYD--RAPCPEDEVSTEE----------------------LIRTLERWSALR------------TEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHL 750
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.590e-29 Identity = 87/228 (38.16%), Postives = 118/228 (51.75%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLL 975
R+++RKA+L+AGF DL + D+ + LYLSLAVLPDG+ FTVKDAAVLL+ + + AA V+ +LE +L + +H+AHS FARE L+D + A+ RW +SSLD + + LW VE VGG GW+ RPYE AL +++ DPL +VAVAKF+ E DW+ A RRLL
Sbjct: 456 RDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAG------------------------VVEILERWSVLRSIRGCYRMAWRGGH---YVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLL 656
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.710e-26 Identity = 88/233 (37.77%), Postives = 118/233 (50.64%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHG-DGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTV 981
R ++RKAIL+AG DL G DD R+ LYLSLAVLPD Q V DAA+LL+ D +A + +A VL VLE +L ++ + MH+ S FAR L+D + A+ RWVG++SSLD V ++ L W VE VGG+GW + P ETAL +D+ +PL + + AVAK A DW+ AS +W R L V
Sbjct: 354 RGNRRKAILQAGLEDLA--IGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVAR-------------------------VLDVLERWSVLR-----------STWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGV 548
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.280e-22 Identity = 102/341 (29.91%), Postives = 145/341 (42.52%), Query Frame = 1
Query: 301 QRKAILRAGFRDLVGVAGDDDSRLLYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRA--QEPNVMYPVWELVNAAEKGGKPEEA------------AAW---------------RRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDP-RVARTLFHLGVCL 1233
+R AILRAGF DL G + LLYLSLAV+PDG+ F K+AAV L D + R +A ++A T + FRMH+AHS FAR L + A+ RW GF S LD + D F + LW A E +GG+ WR RPY AL+++ + P C L AV +F E W+ + RLL V++ A + V + + L++ A +A AAW +R LA+ R EA + + AL ++E R G+ + ++ TL L + L
Sbjct: 505 KRVAILRAGFLDLAAQNGFNP--LLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQR-----------------------------RTRQAAKVVANLEQWAVV---TMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQKDAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVDAAWENRSNTASSPPRLVAKRLLERGQQLAITRRPDEAHEAISEALRLQEERSGDFERLEISATLEFLAIVL 811
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.150e-20 Identity = 103/338 (30.47%), Postives = 146/338 (43.20%), Query Frame = 1
Query: 292 RESQRKAILRAGFRDLVGVAGDDDSRL--LYLSLAVLPDGQEFTVKDAAVLLHGDGSARCGDGMAAXXXXXXXXXXXXXXXXXXXXXXXXXVLRVLEARGILAXXXXXXXXXXSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDP---------LCRVCLVAVAKFRSAE---------GDWDGASLMWRRLLTVEQRAQEPN--VMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGR-LKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR 1236
R+++RKA+++AGF DL G DD R+ LYLSLAVLPDG+ FTVKDAAVL++ + + AA V+ +LE L S + +H+AHS FARE L+D + A+ RW +SS+D + + LW E VGG GW+ RPYE AL +++ DP + +V +++ RS G + A + R L + + +L G+ +A T + R L E E+LL R L I EA D VA LF LG C+R
Sbjct: 411 RDARRKAVVQAGFGDLA--IGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAG------------------------VVEILERWSALCSIRGCYRMAWRGSH---YVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLDLSGCVRAAGQFAQAXXXXXRCLATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGRCMR 719 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1107.1443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1107.1443.1 >prot_Ecto-sp8_S_contig1107.1443.1 ID=prot_Ecto-sp8_S_contig1107.1443.1|Name=mRNA_Ecto-sp8_S_contig1107.1443.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=678bp MAWRDAADSIRAELNNLELTREDDDVRSSVTVAGKVGGGGGKEKKLLLRQback to top mRNA from alignment at Ecto-sp8_S_contig1107:330..3874- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1107.1443.1 ID=mRNA_Ecto-sp8_S_contig1107.1443.1|Name=mRNA_Ecto-sp8_S_contig1107.1443.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3545bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:330..3874- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1107:330..3874- >mRNA_Ecto-sp8_S_contig1107.1443.1 ID=mRNA_Ecto-sp8_S_contig1107.1443.1|Name=mRNA_Ecto-sp8_S_contig1107.1443.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2034bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:330..3874- (Ectocarpus species8 EcLAC_412)back to top |