prot_Ecto-sp8_S_contig1100.1370.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1100.1370.1
Unique Nameprot_Ecto-sp8_S_contig1100.1370.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 9.530e-21
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KIVSQIR DRQTLMWSATWPKEVQALARDFLHHYYQV + S+
Sbjct:  285 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSL 337          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.570e-19
Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV-LSGCLFVRSL--AVEPYGAL----QHVDNGGGCGGHMRSLSLFSERRG 95
            MLD GFEP+I KIVSQIR DRQTLMWSATWPKEVQ LARDFL +YYQV + S+ LS    V  +   +E +G      +H+  GGG   H+++L     ++G
Sbjct:  269 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGG---HLKTLIFVETKKG 367          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A482RQB0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQB0_9ARCH)

HSP 1 Score: 81.6 bits (200), Expect = 5.800e-18
Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    2 LDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQV 48
            LD GFEP+I KIVSQIR DRQTLMWSATWPKEVQ LA+DFLH  YQV
Sbjct:   17 LDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQNLAKDFLHDPYQV 63          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.040e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KIV QIR DRQTLMWSATWPKEVQALARDFL +YYQV + S+
Sbjct:  220 MLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSL 272          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 6.800e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KIVSQIR DRQTLMWSATWPKEVQ LARDFL +YYQV + S+
Sbjct:  264 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSL 316          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A376B358_9ASCO (Probable ATP-dependent RNA helicase DBP2 n=3 Tax=Saccharomycodes ludwigii TaxID=36035 RepID=A0A376B358_9ASCO)

HSP 1 Score: 87.8 bits (216), Expect = 7.360e-18
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KIV QIR DRQTLMWSATWPKEVQALARD+LH Y QV + S+
Sbjct:  270 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQALARDYLHDYIQVNIGSL 322          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6P1AZB2_9BACT (DEAD/DEAH box helicase (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A6P1AZB2_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 1.370e-17
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KI+ QIR DRQ LMWSATWPKEVQALA DFL+ Y Q+ + S+
Sbjct:   36 MLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLNDYVQINIGSL 88          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A2G5BFM2_COERN (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BFM2_COERN)

HSP 1 Score: 87.0 bits (214), Expect = 1.760e-17
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KIV QIR DRQTLMWSATWPKEVQ LARDFLH Y QV + S+
Sbjct:  268 MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDFLHDYIQVNIGSL 320          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A1E3PBS1_WICAA (Uncharacterized protein n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3PBS1_WICAA)

HSP 1 Score: 86.7 bits (213), Expect = 2.510e-17
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I KI+ QIR DRQTLMWSATWPKEVQALARD+LH Y QV + S+
Sbjct:  293 MLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVQALARDYLHDYIQVTVGSL 345          
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.480e-17
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRLSSV 53
            MLD GFEP+I  IVSQIR DRQTLMWSATWPKEV+ LARDFL +YYQV + S+
Sbjct:  182 MLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI9.530e-2184.91DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2XX29_9STRA1.570e-1952.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482RQB0_9ARCH5.800e-1882.98Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835ZEN1_9STRA6.040e-1879.25DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9KNI1_HETAK6.800e-1879.25Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A376B358_9ASCO7.360e-1877.36Probable ATP-dependent RNA helicase DBP2 n=3 Tax=S... [more]
A0A6P1AZB2_9BACT1.370e-1769.81DEAD/DEAH box helicase (Fragment) n=2 Tax=cellular... [more]
A0A2G5BFM2_COERN1.760e-1777.36P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1E3PBS1_WICAA2.510e-1775.47Uncharacterized protein n=1 Tax=Wickerhamomyces an... [more]
A0A6H5KBB2_9PHAE3.480e-1775.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..50
e-value: 1.3E-11
score: 46.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..47
NoneNo IPR availablePANTHERPTHR24031:SF622ATP-DEPENDENT RNA HELICASE DDX5-RELATEDcoord: 1..47
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1100contigEcto-sp8_S_contig1100:1749..2333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1100.1370.1mRNA_Ecto-sp8_S_contig1100.1370.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1100 936..2354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1100.1370.1 ID=prot_Ecto-sp8_S_contig1100.1370.1|Name=mRNA_Ecto-sp8_S_contig1100.1370.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=125bp
MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRL
SSVLSGCLFVRSLAVEPYGALQHVDNGGGCGGHMRSLSLFSERRGTIFVR
AGAQRQCPQQRASSGRGAGCCGRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase