mRNA_Ecto-sp8_S_contig1100.1370.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1100.1370.1
Unique NamemRNA_Ecto-sp8_S_contig1100.1370.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 8.310e-104
Identity = 164/196 (83.67%), Postives = 170/196 (86.73%), Query Frame = 2 
Query:  554 FFFRLLQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQMVGGGCGGGHSRYRR 1141
            F     QV VGSLELAANKDIKQ++ECTEDFNKYRSL KHLQQHG NGKVLVFVE+KKGCDALTRSLRQ+GYQ RCIHGD+TQEERDYVLKDFKGGNFQVLVATDVAAR LDVKDIQMVI  +FPNNME YIH IG   RAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQ         HSRYRR
Sbjct:  325 FLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXX-HSRYRR 519
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: D8LL45_ECTSI (Ethylene-responsive DEAD box RNA helicase, putative (RH30) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL45_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 5.240e-76
Identity = 125/173 (72.25%), Postives = 140/173 (80.92%), Query Frame = 2 
Query:  569 LQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRN-GRELIKILTESENHVPPEL 1084
            +QVKVGSLELAANKDIKQ++ECTE+FNKYRSLCKHLQQHGRNG +LVFVE              + YQ RCI GD+T+E RDYVLKDFK GNFQVLVATDVAAR LD+K+IQMVI  +FPNNME ++H I    RAGAKGVAV+FFGSKNSRN G ELIKILTES N+VPP L
Sbjct:    5 VQVKVGSLELAANKDIKQIIECTEEFNKYRSLCKHLQQHGRNGNLLVFVE--------------DSYQARCIQGDKTREGRDYVLKDFKSGNFQVLVATDVAARGLDMKEIQMVINFDFPNNMEDFMHRIKRCGRAGAKGVAVNFFGSKNSRNNGCELIKILTESGNNVPPVL 163
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.990e-71
Identity = 118/197 (59.90%), Postives = 149/197 (75.63%), Query Frame = 2 
Query:  554 FFFRLLQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQMV--GGGCGGGHSRYR 1138
            F     QV VGSLEL+ANKD+ Q++EC EDF KYR L +HL++ G + K L+FVE+KKGCDALTRSLR +GY  RCIHGD+ Q+ERD+VL++F+    ++LVATDVAAR LDVK+I  V+  +FP NME Y+H IG   RAGAKG A+SFF SKN++  RELI+IL ++ +HVP EL Q Q +  GGG GGG SRYR
Sbjct:  309 FLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQFQGMSYGGGRGGGRSRYR 505
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.260e-67
Identity = 118/196 (60.20%), Postives = 138/196 (70.41%), Query Frame = 2 
Query:  554 FFFRLLQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQMVGGGCGGGHSRYRR 1141
            F     QV VGSLEL+ANKDI+QV+E  EDF KYR L KHLQ+H   G+VL+FVE+KKGCDALTRSLR  G+    IHGD+ Q ERD VL DFK G   +LVATDVAAR LDVKDI+MVI  +FP  ME Y+H IG   RAG KG A+SFF +KNS+  RELI+IL ++   VP EL  M M GGG    + RY R
Sbjct:  222 FLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAM-GGGXXXXYGRYGR 416
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.060e-64
Identity = 112/196 (57.14%), Postives = 141/196 (71.94%), Query Frame = 2 
Query:  554 FFFRLLQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQMVG-GGCGGGHSRYR 1138
            F     QV VGSL+L+ANKDI+Q VE  ED++KY  L ++L++H   G+VL+FVE+KKG D L RSLR +G+    IHGD+TQ+ERDY LK+F+ G   +LVATDVA+R +DVKDI+MVI  +FPNN+E YIH IG   RAGAKG +V+FF SKN+R  R+L KIL+ES N VPP L  M     GG  GG  RYR
Sbjct:  260 FLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPALAGMSGGSYGGASGGQRRYR 455
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 213 bits (541), Expect = 1.150e-60
Identity = 105/180 (58.33%), Postives = 136/180 (75.56%), Query Frame = 2 
Query:  554 FFFRLLQVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 1093
            F     QV VGSLEL AN DI+QV+E  ED+ KY  L +  +  G   K LVFVE+K+GCDALTRSLR +G+  RCIHGD+TQ+ERD+VLK+F+  + ++LVATDVAAR LD++DI+MV+  +FP+NME Y+H IG   RAGAKG AVSFFGSKN++  REL++I+ E+ + VP  LQQM
Sbjct:  304 FLTNYYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRG-GPKALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQM 482
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A6S9IVW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.830e-60
Identity = 109/182 (59.89%), Postives = 135/182 (74.18%), Query Frame = 2 
Query:  572 QVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQH-GRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGS-KNSRNGRELIKILTESENHVPPELQQMQMVGGG 1111
            QV VGSL+LA NKD+ QV+E   D +KYR+L KHL+++     +VLVFVE+KKGCD LTRSLR +G+Q R +HGD++QEERD+VL++FK     +LVATDVAAR LDV DI+MV+  +FPN+ME YIH IG   RAG KGVAVSFF S KN R  RELI IL  +  ++P ELQ M   GGG
Sbjct:  141 QVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNIPGELQGMGSFGGG 322
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A7S1YW91_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW91_TRICV)

HSP 1 Score: 207 bits (528), Expect = 5.300e-59
Identity = 108/189 (57.14%), Postives = 137/189 (72.49%), Query Frame = 2 
Query:  572 QVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQH-GRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGS-KNSRNGRELIKILTESENHVPPELQQMQMVGGGCGGGHSR 1132
            QV VGSL+LA NKD+ Q+VE   D +KYR+L +HL+++     +VLVFVE+KKGCD LTRSLR +G+Q R +HGD++QEERD+VL++FK     +LVATDVAAR LDV DI+MV+  +FPN+ME Y+H IG   RAG KGVAVSFF S KN R  RELI+IL  +  ++ PEL  M    GG G G  R
Sbjct:  288 QVTVGSLDLAGNKDVTQIVEVCSDQDKYRNLLRHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYVHRIGRTGRAGKKGVAVSFFVSQKNGRMARELIEILQRTSQNISPELNGMSSFSGGGGRGRGR 476
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BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 5.670e-59
Identity = 109/188 (57.98%), Postives = 132/188 (70.21%), Query Frame = 2 
Query:  572 QVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQHGRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQMVGGGCGGGHSRY 1135
            QV VGSL+LAANKDIKQ V   ED +KY  L + L+++   GKVLVFVE+K+GCD L RSL+ +G+    IHGD++Q++RD+ L+ FK G   +LVATDVAAR LDVKDIQMV   +FPNNME YIH +G   RAGAKG A+SF   K+ R  REL KIL ES N VP  L+ M   GGG G G  RY
Sbjct:  175 QVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAALRGM---GGGGGYGRGRY 359
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Match: A0A7S4QJZ7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJZ7_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.130e-58
Identity = 109/182 (59.89%), Postives = 135/182 (74.18%), Query Frame = 2 
Query:  572 QVKVGSLELAANKDIKQVVECTEDFNKYRSLCKHLQQH-GRNGKVLVFVESKKGCDALTRSLRQNGYQVRCIHGDETQEERDYVLKDFKGGNFQVLVATDVAARELDVKDIQMVIKIEFPNNMEGYIHCIGWYCRAGAKGVAVSFFGS-KNSRNGRELIKILTESENHVPPELQQMQMVGGG 1111
            QV VGSL+LA NKD+ QV+E   D +KYR+L KHL+++     +VLVFVE+KKGCD LTRSLR +G+Q R +HGD++QEERD+VL++FK     +LVATDVAAR LDV DI+MV+  +FPN+ME YIH IG   RAG KGVAVSFF S KN R  RELI IL  +  ++P ELQ M   GGG
Sbjct:  353 QVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNIPGELQGMGSFGGG 534
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1100.1370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI8.310e-10483.67DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LL45_ECTSI5.240e-7672.25Ethylene-responsive DEAD box RNA helicase, putativ... [more]
A0A7S2XX29_9STRA1.990e-7159.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5KBB2_9PHAE2.260e-6760.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEN1_9STRA2.060e-6457.14DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9KNI1_HETAK1.150e-6058.33Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6S9IVW3_9STRA1.830e-6059.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1YW91_TRICV5.300e-5957.14Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A4D9CVW6_9STRA5.670e-5957.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4QJZ7_9STRA3.130e-5859.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1100contigEcto-sp8_S_contig1100:936..2354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score97.4
Seed ortholog evalue4.9e-18
Seed eggNOG ortholog2880.D7FGZ5
Preferred nameDBP2
Model size1141
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
Exons3
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
Cds size375
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143186.7602305-UTR-Ecto-sp8_S_contig1100:935..16061681143186.7602305-UTR-Ecto-sp8_S_contig1100:935..1606Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1100 936..1606 -
1681143186.7722-UTR-Ecto-sp8_S_contig1100:1674..17481681143186.7722-UTR-Ecto-sp8_S_contig1100:1674..1748Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1100 1675..1748 -
1681143186.8001518-UTR-Ecto-sp8_S_contig1100:2333..23541681143186.8001518-UTR-Ecto-sp8_S_contig1100:2333..2354Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1100 2334..2354 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143186.7815027-CDS-Ecto-sp8_S_contig1100:1748..19241681143186.7815027-CDS-Ecto-sp8_S_contig1100:1748..1924Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1100 1749..1924 -
1681143186.7909932-CDS-Ecto-sp8_S_contig1100:2134..23331681143186.7909932-CDS-Ecto-sp8_S_contig1100:2134..2333Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1100 2135..2333 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1100.1370.1prot_Ecto-sp8_S_contig1100.1370.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1100 1749..2333 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1100.1370.1

>prot_Ecto-sp8_S_contig1100.1370.1 ID=prot_Ecto-sp8_S_contig1100.1370.1|Name=mRNA_Ecto-sp8_S_contig1100.1370.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=125bp
MLDTGFEPRICKIVSQIRCDRQTLMWSATWPKEVQALARDFLHHYYQVRL
SSVLSGCLFVRSLAVEPYGALQHVDNGGGCGGHMRSLSLFSERRGTIFVR
AGAQRQCPQQRASSGRGAGCCGRM*
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mRNA from alignment at Ecto-sp8_S_contig1100:936..2354-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1100.1370.1 ID=mRNA_Ecto-sp8_S_contig1100.1370.1|Name=mRNA_Ecto-sp8_S_contig1100.1370.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1419bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1100:936..2354- (Ectocarpus species8 EcLAC_412)
GTTCTGGACGAGGCAGACCGCATGCTGGACACGGGGTTCGAGCCCCGGAT
CTGCAAGATTGTGAGCCAGATCAGGTGCGACAGGCAGACGCTCATGTGGA
GCGCTACCTGGCCCAAGGAGGTGCAGGCGCTGGCGCGTGACTTCCTACAC
CACTATTACCAGGTTCGTCTGTCAAGTGTTTTGTCAGGATGCTTGTTCGT
TCGTTCGTTGGCTGTGGAACGTGTTCGTGATTCGTAGCTTTTGAGATGGC
TGTTGTAGATGATGTGGTCGGCCCCTTCGAGATTGTGGGCACGTATTCGT
CGAGGTTGGAAAATTGGAGCAGTCCTTGCTTATTGTTTTTTGAGTCTGGC
GGGACAATTGGTTGTTGTCGTGACCGCGCGGAAGATCTTGGACACGTGTC
GGCGTTGTGGGATGATTGGTAGTGGGTGAGCGTACGGCGCTCTGCAGCAT
GTTGACAACGGCGGCGGCTGTGGCGGCCATATGCGGTCGCTGTCCCTTTT
CTCAGAGCGAAGGGGCACAATTTTTGTGAGAGCGGGAGCACAGCGGCAGT
GTCCACAGCAACGCGCGTCGTCAGGACGAGGTGCAGGTTGTTGTGGACGC
ATGTAGAGCACGGGTCATCCCATCCGCCGGCGAAAGACGAGTTCTGTCGT
CTTTTCGGCCTAAAACGACAGTGAAAGCGTGTCGAGGACGGTAGCCGCTA
GTTGATTTCTGTGGTTGGCGGTCTGGTGAATCGATAAACCCGCGCGAGTG
TGCATACGGTCCGGTGAATCGATAAACCCACGCGAGTGTGCATACAAACC
AACCCCCTTTTGTTGCCACCCCCCGCCTTTTTTTTTCTTTCGTCTCTTGC
AGGTGAAGGTGGGATCCCTGGAGCTTGCGGCAAACAAGGACATCAAGCAG
GTCGTTGAGTGCACGGAGGACTTCAACAAGTACCGCAGCCTCTGCAAGCA
CCTGCAACAGCACGGCCGCAACGGCAAGGTACTGGTATTCGTCGAGTCCA
AGAAGGGCTGCGACGCGCTCACACGCTCCCTCCGGCAGAACGGCTACCAG
GTCCGCTGCATCCACGGCGACGAGACACAGGAGGAGCGCGACTACGTCCT
CAAGGACTTCAAGGGCGGGAACTTCCAGGTGCTGGTGGCAACGGACGTGG
CCGCGCGTGAGCTCGACGTGAAGGACATCCAGATGGTGATCAAGATCGAG
TTTCCCAACAACATGGAGGGCTACATCCACTGCATCGGGTGGTACTGCCG
AGCGGGCGCCAAGGGCGTGGCCGTGAGCTTCTTCGGCTCCAAGAACTCCC
GCAACGGCCGCGAGCTCATCAAGATCCTAACCGAGTCGGAGAACCACGTC
CCGCCGGAGTTGCAACAGATGCAGATGGTGGGCGGCGGCTGCGGCGGGGG
TCACAGCCGATACCGACGC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1100:936..2354-

>mRNA_Ecto-sp8_S_contig1100.1370.1 ID=mRNA_Ecto-sp8_S_contig1100.1370.1|Name=mRNA_Ecto-sp8_S_contig1100.1370.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=375bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1100:936..2354- (Ectocarpus species8 EcLAC_412)
ATGCTGGACACGGGGTTCGAGCCCCGGATCTGCAAGATTGTGAGCCAGAT
CAGGTGCGACAGGCAGACGCTCATGTGGAGCGCTACCTGGCCCAAGGAGG
TGCAGGCGCTGGCGCGTGACTTCCTACACCACTATTACCAGGTTCGTCTG
TCAAGTGTTTTGTCAGGATGCTTGTTCGTTCGTTCGTTGGCTGTGGAACC
GTACGGCGCTCTGCAGCATGTTGACAACGGCGGCGGCTGTGGCGGCCATA
TGCGGTCGCTGTCCCTTTTCTCAGAGCGAAGGGGCACAATTTTTGTGAGA
GCGGGAGCACAGCGGCAGTGTCCACAGCAACGCGCGTCGTCAGGACGAGG
TGCAGGTTGTTGTGGACGCATGTAG
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