prot_Ecto-sp8_S_contig10748.1127.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10748.1127.1
Unique Nameprot_Ecto-sp8_S_contig10748.1127.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length301
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10748.1127.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 5.210e-62
Identity = 189/310 (60.97%), Postives = 192/310 (61.94%), Query Frame = 0 
Query:    2 VNGALPNASYRDSSAAALSGGDLRAAAVSTASSPSSLXXXXXXXXXXXXXXXGASMRLQSLADLATQELQTMCDVGETDTAGAHXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGFSPKRHISPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ERGVPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRPRSVSMPEGMELQARAWSGGYSSGRRKTGRIDSIKEELEGHEGSTHGTXXXXXXXXXXXXXXXXXXXXXXXXXXXS-KSGWGGTVEDAETLIGLA 301
            VNGALPNASYRDS+AAAL GGD R AAVS ASSPSS                 ASMRLQSLADLATQELQTM DV ETDT G H                           PAGFSPKRH+SPRLSGG  XXXXXXXXXXXXXXXX        XXXXX                   ERGVPRS    XXXXXXXXXXX             HRPRSVSMPEGMELQARAWSGGYSSGRRK+GRIDSIKEELEGHEGSTHGT                  XXXXXXXXX  KSGWGGTVEDAETLIGLA
Sbjct:  110 VNGALPNASYRDSAAAALPGGDPREAAVSIASSPSSFSLSTSPRPRSASSGGVASMRLQSLADLATQELQTMGDVDETDTPGIHGHRRHQQHQRSLSNGNSQSSSARTPPLPAGFSPKRHLSPRLSGGGGXXXXXXXXXXXXXXXXVSALSSAAXXXXXCSAPLPPARAAPXXXXXLRERGVPRSRHERXXXXXXXXXXXHAAARAEGGRGMRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEGHEGSTHGTRSRTWRAGSGGSSGFDGEXXXXXXXXXXXKSGWGGTVEDAETLIGLA 419
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BLAST of mRNA_Ecto-sp8_S_contig10748.1127.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.380e-53
Identity = 215/250 (86.00%), Postives = 219/250 (87.60%), Query Frame = 0 
Query:    1 MVNGALPNASYRDSSAAALSGGDLRAAAVSTASSPSSLXXXXXXXXXXXXXXX----GASMRLQSLADLATQELQTMCDVGETDTAGAHXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGFSPKRHISPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRPRSVSMPEGMELQARAWSGGYSSGRRKTGRIDSIKEELE 246
            M+NGALPN SYRDS+AAALSGGD RAA VSTASSPS  XXXXXXXXXXXXXXX    GASMRLQSLADLATQELQTMCDV ETDTAGAH XXXXXXXXXXXXXXXXXXXXX    APAGFSPKRH+SPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ERGVPRS      XXXXXXXXXXXXXXXXXX    HRPRSVSMPEGMELQARAWSGGYSSGRRK+GRIDSIKEELE
Sbjct:  123 MLNGALPNTSYRDSAAAALSGGDPRAATVSTASSPSXXXXXXXXXXXXXXXXXXIGGGASMRLQSLADLATQELQTMCDVDETDTAGAHGXXXXXXXXXXXXXXXXXXXXXRTPPAPAGFSPKRHLSPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR----ERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE 368
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10748.1127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K330_9PHAE5.210e-6260.97CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LD77_ECTSI1.380e-5386.00CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10748contigEcto-sp8_S_contig10748:3610..5793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10748.1127.1mRNA_Ecto-sp8_S_contig10748.1127.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10748 3600..5793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10748.1127.1 ID=prot_Ecto-sp8_S_contig10748.1127.1|Name=mRNA_Ecto-sp8_S_contig10748.1127.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=301bp
MVNGALPNASYRDSSAAALSGGDLRAAAVSTASSPSSLSFSTSPRPRSAS
SGGGASMRLQSLADLATQELQTMCDVGETDTAGAHSHRRHHHHHRSLSNG
NGQSSSTRTPPAPAGFSPKRHISPRLSGGGGGGGGGRGVSALSSAAAAVA
SCSSPSPPARAAPSHHHHLRERGVPRSRHERAEEEEEEEEEMRAAARAGG
GRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKTGRIDSIKEELEGHEG
STHGTRSRTWRTGSGGSSGFDGEGGGGGGASGSKSGWGGTVEDAETLIGL
A
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