prot_Ecto-sp8_S_contig10736.1112.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig10736.1112.1
Unique Name	prot_Ecto-sp8_S_contig10736.1112.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	748

Homology

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BLAST of mRNA_Ecto-sp8_S_contig10736.1112.1 vs. uniprot
Match: D8LP69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP69_ECTSI)

HSP 1 Score: 1046 bits (2704), Expect = 0.000e+0
Identity = 724/745 (97.18%), Postives = 733/745 (98.39%), Query Frame = 0

Query:    1 MADAVLGVKGPTVDKKTVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAAYKAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIDTLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVPTYEKFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMDNLKGFMVMLINKIKNETIGVVNTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDKINIPALDIPTVNIKAPADIKEIXXXXXXXXXXXXXXXXXXXXXXXXLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLVGEGVSLLKDLFMNEIVPAFMKLIRAMADPILDFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLIFASIIWMFLGGFLSNGKALVDLALSVMQGSAVALTDLDHQLDLRFGVIEKAAPALSSFFMH 745
            MADA LGV GPTVDKKTVSYVVAGCFCVYALVYKIPIPCFGCQK+GFWYRCVMDTG GTASCAA+KAAK+RVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFI TLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAV TYE+FMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMD+LKGFMVMLINKIKNETIGVVNTGI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFD+I+IPALDIPTVNIKAPADIKE XXXXXXXXXXXXXXXXXXXXXXXXLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGL GEGVSLLKDLFM+EIVPAFMKLIRAMADPIL FVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLI ASIIWMFLGGFLSNGKALVDLALSVMQGSA+ALTDLDHQLDLRFGVIEKA PALSSFFMH
Sbjct:    4 MADAALGVSGPTVDKKTVSYVVAGCFCVYALVYKIPIPCFGCQKDGFWYRCVMDTGHGTASCAAHKAAKNRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVSTYERFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMDDLKGFMVMLINKIKNETIGVVNTGIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDQIDIPALDIPTVNIKAPADIKEXXXXXXXXXXXXXXXXXXXXXXXXXLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGVSLLKDLFMDEIVPAFMKLIRAMADPILAFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLILASIIWMFLGGFLSNGKALVDLALSVMQGSAIALTDLDHQLDLRFGVIEKATPALSSFFMH 748

[Close]

BLAST of mRNA_Ecto-sp8_S_contig10736.1112.1 vs. uniprot
Match: Q8QNM9_ESV1K (EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM9_ESV1K)

HSP 1 Score: 905 bits (2338), Expect = 0.000e+0
Identity = 613/745 (82.28%), Postives = 654/745 (87.79%), Query Frame = 0

Query:    1 MADAVLGVKGPTVDKKTVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAAYKAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIDTLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVPTYEKFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANIPIGNFVGDVVDVFQKLPEAMDNLKGFMVMLINKIKNETIGVVNTGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNMNRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDKINIPALDIPTVNIKAPADIKEIXXXXXXXXXXXXXXXXXXXXXXXXLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLVGEGVSLLKDLFMNEIVPAFMKLIRAMADPILDFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVIAKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLIFASIIWMFLGGFLSNGKALVDLALSVMQGSAVALTDLDHQLDLRFGVIEKAAPALSSFFMH 745
            MADAVLGVKGP VDKK+VSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAA+KAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFI TLKDQ+LGLKDRMAEKINLI+ FLRDK+ LFWSK+K VAV TYEKFM+VVINPVIKFFVANLL+PA VVFEK MEFR+L+W+VLSNA+DKFANIPIG+FVGDVVDVFQK+PEAMDNLKG +VMLINKIKN+TIGVVNTGI                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         IM++ +N  +        I  R  +WI  PG+V+ I+ID VELPTIPVEKFGRIKE LNIPNIPF  I+IPALDIPTVNIKAPADIK  XXXXXXXXXXXXXXXXXXXXXX  LP IPGFGFI+D+VEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGL GEGVSLLKDLF+NEIVPAFMKLIR MADPIL FVK ATDHTWRFMKKLG NVGSIFN+SY+VI KVTGVIAKGVFHTGLY++GTT+ERYTG++PLP+SVKL+LI ASIIWMF GGFLSNGK +VDL+LSV+QG+AVALTDLDHQLDL FGVIEKA PA SSFFMH
Sbjct:    4 MADAVLGVKGPRVDKKSVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYRCVMDTGDGTASCAAHKAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGVISDFIATLKDQVLGLKDRMAEKINLIIAFLRDKIELFWSKIKNVAVSTYEKFMEVVINPVIKFFVANLLKPAIVVFEKNMEFRDLIWSVLSNAVDKFANIPIGDFVGDVVDVFQKIPEAMDNLKGLLVMLINKIKNDTIGVVNTGIRESIQGVETSVNFLSGKLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIKGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPVNATVGIMEKVRNVKVPV------IKKRIFSWIKTPGKVRDINIDGVELPTIPVEKFGRIKEGLNIPNIPFKNIDIPALDIPTVNIKAPADIKXXXXXXXXXXXXXXXXXXXXXXXXFDLPSIPGFGFITDKVEKVKESIREIFETAMAPLYDGLATLIALVGSIISSAKHFFYNYLTWTAIKSRVTQLMGLAGEGVSLLKDLFVNEIVPAFMKLIRGMADPILAFVKAATDHTWRFMKKLGANVGSIFNKSYKVITKVTGVIAKGVFHTGLYIIGTTVERYTGFIPLPLSVKLMLIMASIIWMFFGGFLSNGKVIVDLSLSVIQGAAVALTDLDHQLDLGFGVIEKATPAASSFFMH 742

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig10736.1112.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig10736.1112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LP69_ECTSI	0.000e+0	97.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
Q8QNM9_ESV1K	0.000e+0	82.28	EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (i...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..671
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 694..747
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 672..693
None	No IPR available	TMHMM	TMhelix		coord: 671..693
None	No IPR available	TMHMM	TMhelix		coord: 542..564

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig10736	contig	Ecto-sp8_S_contig10736:3074..5317 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig10736.1112.1	mRNA_Ecto-sp8_S_contig10736.1112.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig10736 3068..5317 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig10736.1112.1 ID=prot_Ecto-sp8_S_contig10736.1112.1|Name=mRNA_Ecto-sp8_S_contig10736.1112.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=748bp
MADAVLGVKGPTVDKKTVSYVVAGCFCVYALVYKIPIPCFGCQKNGFWYR
CVMDTGDGTASCAAYKAAKSRVETAGRIMDEAGVYMDNLWDFTKTELPGV
ISDFIDTLKDQILGLKDRMAEKINLILTFLRDKMNLFWSKVKGVAVPTYE
KFMDVVINPVIKFFVANLLQPATVVFEKIMEFRELVWTVLSNAIDKFANI
PIGNFVGDVVDVFQKLPEAMDNLKGFMVMLINKIKNETIGVVNTGIRESI
QGVETSVNVLSGGIDEGVNSIVGGLNHVKDELVGNLNRSINGMAFGIETA
VNKTTGGIETVVNKSVGGITDGINDNMNRVEKGVGKVMETTNDVIKGAEI
AVNTISCGINNALNKVGDGINTVTKGVNSAVNKVISPVNSVVNIMKRAKN
THIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKED
LNIPNIPFDKINIPALDIPTVNIKAPADIKEIDIPDINIPGVAIPIPRDV
EEEDFKLPPIPGFGFISDRVEKVKESIREIFETAMAPLYDGLATLIALVG
SIISSAKHFFYNYLTWTAIKSRVTQLMGLVGEGVSLLKDLFMNEIVPAFM
KLIRAMADPILDFVKTATDHTWRFMKKLGTNVGSIFNESYRVIAKVTGVI
AKGVFHTGLYVVGTTIERYTGWLPLPISVKLLLIFASIIWMFLGGFLSNG
KALVDLALSVMQGSAVALTDLDHQLDLRFGVIEKAAPALSSFFMHYY*