prot_Ecto-sp8_S_contig105806.912.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig105806.912.1
Unique Nameprot_Ecto-sp8_S_contig105806.912.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length169
Homology
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A5E7YIF9_9RHOB (Spermidine/putrescine transport system permease protein PotB n=14 Tax=Rhodobacterales TaxID=204455 RepID=A0A5E7YIF9_9RHOB)

HSP 1 Score: 314 bits (805), Expect = 2.220e-106
Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWIYLLGGNGIPAL+EA+GLG IRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDD GLM
Sbjct:  118 YAWIYLLGGNGIPALLEAVGLGDIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDIGLM 285          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A1B1PW17_9RHOB (ABC transporter permease n=22 Tax=Rhodobacterales TaxID=204455 RepID=A0A1B1PW17_9RHOB)

HSP 1 Score: 288 bits (736), Expect = 6.450e-96
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIPAL+EA+G   +RL+NTPFAVLVGIVYGYLPLMVFPIYVALEKLD+ LLEAAADLGTPPWR+FLQITLPLSMPGVLTGSMLVFILL GEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVAL+VIMLI V +Y+R V+RFGA RDD GLM
Sbjct:  116 YAWIFLLGGKGIPALLEAIGFDDVRLLNTPFAVLVGIVYGYLPLMVFPIYVALEKLDQRLLEAAADLGTPPWRAFLQITLPLSMPGVLTGSMLVFILLMGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALVVIMLITVGIYTRLVKRFGASRDDVGLM 283          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: UPI0012ECD218 (ABC transporter permease n=1 Tax=Mesorhizobium xinjiangense TaxID=2678685 RepID=UPI0012ECD218)

HSP 1 Score: 284 bits (727), Expect = 1.610e-94
Identity = 145/168 (86.31%), Postives = 154/168 (91.67%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIPAL + +G+  +RLINTPFAVL+GIVYGYLPLMVFPIYVALEKLD+ LLEAAADLGTPPWRSFLQITLPLSMPGVLTG+MLVFILL GEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVAL+VIMLIVV LY R  RRF  GRDD GLM
Sbjct:  118 YAWIFLLGGRGIPALFDWVGIEGVRLINTPFAVLIGIVYGYLPLMVFPIYVALEKLDKQLLEAAADLGTPPWRSFLQITLPLSMPGVLTGTMLVFILLMGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALVVIMLIVVTLYGRLARRFSVGRDDVGLM 285          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A5B8IB16_9RHOB (ABC transporter permease n=1 Tax=Qingshengfaniella alkalisoli TaxID=2599296 RepID=A0A5B8IB16_9RHOB)

HSP 1 Score: 280 bits (715), Expect = 1.000e-92
Identity = 143/168 (85.12%), Postives = 154/168 (91.67%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG G+PAL+E+ GL  IR+INTPFAVLVGIVYGYLPLMVFPIYVALEKLD+ LLEA+ADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILL GEFLIPA+LGGGKVFFVGNALVDLFLQSRNWAFGSAVAVAL+VIMLI V LY RA+ RF +G DD  LM
Sbjct:  116 YAWIFLLGGRGLPALLESFGLPEIRMINTPFAVLVGIVYGYLPLMVFPIYVALEKLDKRLLEASADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLMGEFLIPALLGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALVVIMLICVGLYRRALGRFASGPDDVSLM 283          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: UPI001553A51E (ABC transporter permease n=2 Tax=Rhodobacterales TaxID=204455 RepID=UPI001553A51E)

HSP 1 Score: 279 bits (714), Expect = 1.520e-92
Identity = 140/168 (83.33%), Postives = 153/168 (91.07%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIPA +   GL  +RL+NTPFAVLVGIVYGYLPLMVFPIYVALEKLD+ LLEAAADLGTPPWR+FLQITLPLSMPGVLTGSMLVFILL GEFLIP+ILGGGKVFFVGNALVDLFLQSRNW FGSAVAV L+++ML+ V LY+RA +RFGAGRDDA LM
Sbjct:  118 YAWIFLLGGKGIPAFLAMFGLEDVRLLNTPFAVLVGIVYGYLPLMVFPIYVALEKLDKRLLEAAADLGTPPWRAFLQITLPLSMPGVLTGSMLVFILLMGEFLIPSILGGGKVFFVGNALVDLFLQSRNWPFGSAVAVGLVLVMLVTVGLYTRAAKRFGAGRDDAALM 285          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A4S3MTI1_9RHOB (ABC transporter permease n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A4S3MTI1_9RHOB)

HSP 1 Score: 271 bits (692), Expect = 3.230e-89
Identity = 135/168 (80.36%), Postives = 152/168 (90.48%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWIYLLGG GIP+L+ A+GLG+ RLINTPFAVLVGIVYGYLPLMVFPIYVALE+LD+ LLEA+ADLG+PPWRSF+Q+TLP+SM GV TG MLVFILL GEFLIPA+LGGGKVFF+GNALVDLFLQSRNWAFGSAVAVAL++IML+ V  Y RAVRR+  GRDD  LM
Sbjct:  117 YAWIYLLGGQGIPSLLNALGLGNPRLINTPFAVLVGIVYGYLPLMVFPIYVALERLDKRLLEASADLGSPPWRSFVQVTLPMSMAGVATGCMLVFILLMGEFLIPAMLGGGKVFFIGNALVDLFLQSRNWAFGSAVAVALVLIMLVTVTAYMRAVRRWSGGRDDVSLM 284          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: D5AL07_RHOCB (Polyamine ABC transporter, permease protein PotB-3 n=6 Tax=Rhodobacter TaxID=1060 RepID=D5AL07_RHOCB)

HSP 1 Score: 268 bits (684), Expect = 5.480e-88
Identity = 134/168 (79.76%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIP L+  +GLG +RLINTPFAVLVGIVYGYLPLMVFPIYV+LEKLDR LLEAA DLG PPWRSF+QITLPLS+PGV TGSMLVFILL GE+LIP +LGGGKVFFVGNALVDLFLQSRNWAFGSA+AV L+ IML+ V LY R ++R GA RDD GLM
Sbjct:  118 YAWIFLLGGRGIPQLLSDLGLGDLRLINTPFAVLVGIVYGYLPLMVFPIYVSLEKLDRRLLEAAGDLGAPPWRSFVQITLPLSLPGVATGSMLVFILLMGEYLIPQMLGGGKVFFVGNALVDLFLQSRNWAFGSALAVTLVAIMLVTVTLYMRFLKRIGAARDDVGLM 285          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A6L6J930_9RHOB (ABC transporter permease subunit n=4 Tax=Paracoccus TaxID=265 RepID=A0A6L6J930_9RHOB)

HSP 1 Score: 266 bits (680), Expect = 2.080e-87
Identity = 132/168 (78.57%), Postives = 149/168 (88.69%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIPAL+  +GLG IRLINTPFAVLVGIVYGYLPLMVFPIYV+LE+LD+ LLEA++DLG PPWRSFLQ+TLPLS+PGV TGSMLVFILL GE+LIP +LGGGKVFFVGNALVDLFLQSRNWAFGSA+AV L+ +ML+ V LY R + R GA RDD GLM
Sbjct:  116 YAWIFLLGGRGIPALLADLGLGDIRLINTPFAVLVGIVYGYLPLMVFPIYVSLERLDKRLLEASSDLGAPPWRSFLQVTLPLSLPGVATGSMLVFILLMGEYLIPQMLGGGKVFFVGNALVDLFLQSRNWAFGSAMAVTLVAVMLVTVTLYMRFLSRIGAARDDVGLM 283          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A258GN32_9RHOB (ABC transporter permease n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A258GN32_9RHOB)

HSP 1 Score: 264 bits (674), Expect = 8.840e-87
Identity = 133/168 (79.17%), Postives = 146/168 (86.90%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWIYLLGG GIP L+  +GLG  RLINTPFAVL GIVYGYLPLMVFPIYV+LE+LD+ LLEA+ADLG+PPWRSFLQ+TLPLSMPGV TG MLVFILL GEFLIPA+LGGGKVFFVGNALVDLFLQSRNW FG+AVAVAL+VIML+ V  Y R  RR+  GRDD  LM
Sbjct:   96 YAWIYLLGGQGIPKLVSLLGLGSPRLINTPFAVLTGIVYGYLPLMVFPIYVSLERLDKRLLEASADLGSPPWRSFLQVTLPLSMPGVATGCMLVFILLMGEFLIPAMLGGGKVFFVGNALVDLFLQSRNWPFGAAVAVALVVIMLVTVTAYMRFTRRWAGGRDDVSLM 263          
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Match: A0A421BJ26_9RHOB (ABC transporter permease n=1 Tax=Sinirhodobacter hankyongi TaxID=2294033 RepID=A0A421BJ26_9RHOB)

HSP 1 Score: 264 bits (674), Expect = 1.810e-86
Identity = 130/168 (77.38%), Postives = 150/168 (89.29%), Query Frame = 0
Query:    1 YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGEFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFGAGRDDAGLM 168
            YAWI+LLGG GIPAL+  +GLG  RLINTPFAVLVGIVYGY+PLM FPIYV+LEKLDR LLEAA+DLG+PPWRSF+Q+TLPLS+PGV TGSMLVFILL GE+LIP +LGGGKVFFVGNALVDLFLQSRNWAFGSA++V L+ +ML+VV LY R ++R GA R+D GLM
Sbjct:  118 YAWIFLLGGRGIPALLADLGLGDWRLINTPFAVLVGIVYGYMPLMFFPIYVSLEKLDRKLLEAASDLGSPPWRSFVQVTLPLSLPGVATGSMLVFILLMGEYLIPQMLGGGKVFFVGNALVDLFLQSRNWAFGSAMSVTLVAVMLVVVTLYMRFLKRIGAAREDVGLM 285          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105806.912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E7YIF9_9RHOB2.220e-10697.62Spermidine/putrescine transport system permease pr... [more]
A0A1B1PW17_9RHOB6.450e-9686.90ABC transporter permease n=22 Tax=Rhodobacterales ... [more]
UPI0012ECD2181.610e-9486.31ABC transporter permease n=1 Tax=Mesorhizobium xin... [more]
A0A5B8IB16_9RHOB1.000e-9285.12ABC transporter permease n=1 Tax=Qingshengfaniella... [more]
UPI001553A51E1.520e-9283.33ABC transporter permease n=2 Tax=Rhodobacterales T... [more]
A0A4S3MTI1_9RHOB3.230e-8980.36ABC transporter permease n=4 Tax=Alphaproteobacter... [more]
D5AL07_RHOCB5.480e-8879.76Polyamine ABC transporter, permease protein PotB-3... [more]
A0A6L6J930_9RHOB2.080e-8778.57ABC transporter permease subunit n=4 Tax=Paracoccu... [more]
A0A258GN32_9RHOB8.840e-8779.17ABC transporter permease n=2 Tax=Rhodobacterales T... [more]
A0A421BJ26_9RHOB1.810e-8677.38ABC transporter permease n=1 Tax=Sinirhodobacter h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035906MetI-like superfamilyGENE3D1.10.3720.10coord: 1..160
e-value: 1.6E-33
score: 117.9
IPR035906MetI-like superfamilySUPERFAMILY161098MetI-likecoord: 1..157
IPR000515ABC transporter type 1, transmembrane domain MetI-likePFAMPF00528BPD_transp_1coord: 26..157
e-value: 3.3E-17
score: 62.8
IPR000515ABC transporter type 1, transmembrane domain MetI-likePROSITEPS50928ABC_TM1coord: 1..151
score: 19.924
NoneNo IPR availablePANTHERPTHR42929:SF1INNER MEMBRANE ABC TRANSPORTER PERMEASE PROTEIN YDCU-RELATEDcoord: 1..158
NoneNo IPR availablePANTHERPTHR42929FAMILY NOT NAMEDcoord: 1..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..110
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig105806contigEcto-sp8_S_contig105806:3..509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig105806.912.1mRNA_Ecto-sp8_S_contig105806.912.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig105806 3..509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig105806.912.1 ID=prot_Ecto-sp8_S_contig105806.912.1|Name=mRNA_Ecto-sp8_S_contig105806.912.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=169bp
YAWIYLLGGNGIPALMEAMGLGHIRLINTPFAVLVGIVYGYLPLMVFPIY
VALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTG
EFLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVAL
YSRAVRRFGAGRDDAGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035906MetI-like_sf
IPR000515MetI-like