mRNA_Ecto-sp8_S_contig1057.894.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.940e-70 Identity = 123/154 (79.87%), Postives = 132/154 (85.71%), Query Frame = 3
Query: 105 EGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVW 566
E RT LDAFV+ALSQACEGGEKRWYASTLELQLTSLD+CRACR+TSILHV V+ TP SLWSSRT QT PNTRS L +SSRVPVVRAL L WALSME LLRKA+IELWTWS+RLEL GS C SSLGSEVVWPRGLT+LVL+TDS IA VW
Sbjct: 6 EWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTVW 159
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.990e-57 Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 3
Query: 96 MATEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTD 539
M TEG T DAF +ALSQACEGGEKRWY ST ELQL SLD+CRACRST LHVRV TP SLWS T Q PNT+SS++RV SRVPVVRAL L WA SME L+++A+IELW+ S+RLE+ G CA+SLGS VVWP GLT+LVL TD
Sbjct: 1 MPTEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGS-VVWPLGLTQLVLDTD 147
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 153 bits (387), Expect = 5.030e-38 Identity = 88/178 (49.44%), Postives = 111/178 (62.36%), Query Frame = 3
Query: 96 MATEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVWWPAHLQYRSFGSNFNQPVAGV 629
M T+G + LDAFVVAL+QAC+G EKRWY STLELQL SL++C ACR LHVRV TP SLW T N RS ++ +SSRVPVV+A GL WAL M L ++++ E+ + S A+SL S VWP+ L +V +D + T + WPA LQ SFG FNQ + GV
Sbjct: 1 MTTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLES-AVWPQRLKRMVFESDMTVNTAS--WPASLQQLSFGCGFNQAIVGV 175
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.680e-34 Identity = 85/174 (48.85%), Postives = 107/174 (61.49%), Query Frame = 3
Query: 96 MATEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLH-TDSAIATDNVWWPAHLQYRSFGSNFNQ 614
M +E + LDAFVVALSQ EGGEKRWY STL+LQL SL+ C ACRST +LHV V+ TP +LWS T S+RVP V+A+GL WA E L AS ELWT + L+LQ S C ++L S VVWP+GL LV+ T I + + WP+ L+ +F F+Q
Sbjct: 1 MTSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT-------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDS-VVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 135 bits (339), Expect = 7.180e-33 Identity = 80/169 (47.34%), Postives = 101/169 (59.76%), Query Frame = 3
Query: 108 GRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVWWPAHLQYRSFGSNFNQ 614
GR+ L AF+VAL+Q C G EKRWYASTLELQL SL+ C ACR LHVRV+ TP SLWS + RS VS+RVP V+A GL WAL ME LL+ +++EL + S+ + G+ +SLGS L LV +D +T + WPA L FG F+Q
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTAS--WPASLPQLLFGDRFDQ 179
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.010e-32 Identity = 81/173 (46.82%), Postives = 108/173 (62.43%), Query Frame = 3
Query: 108 GRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVWWPAHLQYRSFGSNFNQPVAG 626
GR+ LDAF+VAL QA +G KRWY STLELQL SL+ C ACRS V+++ TPHSLWS R + RS + SRVP V+A G MWAL ME LL +++ EL S+ + G A+S G + W + LT L+ +++ ++ ++V WPA LQ SFG FNQP+ G
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPG-RMGWFQKLTRLMFYSERSV--NSVSWPACLQELSFGDFFNQPIIG 194
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.480e-32 Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 3
Query: 102 TEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVWW 569
TEG LD +VAL+QAC+G EKRWY STLELQL SL++C ACRS +LHV V TP +LWSSRT++T P+ RS + S+RVP V+AL WAL M+ L ++A+ E ++R G A+S+ S VVWP L LV + VWW
Sbjct: 83 TEGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVES-VVWPESLKRLVF--SRRMPGKAVWW 235
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.320e-27 Identity = 77/175 (44.00%), Postives = 97/175 (55.43%), Query Frame = 3
Query: 96 MATEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLR----------------------------VSSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHT 536
M +EG + DA ++A+SQA EG KRWY STLEL+L SL+ CRACR +HVRV+ TP SLWS T +TRSS+ R +SSRVPV +ALGL WAL E LL+ ++ELWT + L+L+ S S L S V WP+ L L L T
Sbjct: 1 MDSEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVS-VAWPQNLKRLALET 174
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.240e-24 Identity = 57/86 (66.28%), Postives = 63/86 (73.26%), Query Frame = 3
Query: 108 GRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRVSSRVPVV 365
G T DAFVVALSQACEGG KR Y STLEL L SLD+CRA RSTS LHVRV + TP S WS Q P+ SS++R+SSRVPVV
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 111 bits (277), Expect = 4.590e-24 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 3
Query: 174 RWYASTLELQLTSLDMCRACRSTSILHVRVNHLTPHSLWSSRTTQTWPNTRSSRLRV-----SSRVPVVRALGLMWALSMEDLLRKASIELWTWSQRLELQGSWCASSLGSEVVWPRGLTELVLHTDSAIATDNVWWPAHLQYRSFGSNFNQPVAG 626
RW+ STL +QL SL+ CRA RS + + V+ P SLW R +QT +TR +R SRVP++RA L W LSME LL+ ++ELWT + L L G +S S +V P+ L +L + D+ + + V WPA LQ SFG FN+P+AG
Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPAS-MVQPQRLEQLEGNKDARDSVEAVPWPAFLQKLSFGFPFNRPIAG 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1057.894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1057.894.1 >prot_Ecto-sp8_S_contig1057.894.1 ID=prot_Ecto-sp8_S_contig1057.894.1|Name=mRNA_Ecto-sp8_S_contig1057.894.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=300bp MATEGRTGYLDAFVVALSQACEGGEKRWYASTLELQLTSLDMCRACRSTSback to top mRNA from alignment at Ecto-sp8_S_contig1057:4191..8568+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1057.894.1 ID=mRNA_Ecto-sp8_S_contig1057.894.1|Name=mRNA_Ecto-sp8_S_contig1057.894.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4378bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1057:4191..8568+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1057:4191..8568+ >mRNA_Ecto-sp8_S_contig1057.894.1 ID=mRNA_Ecto-sp8_S_contig1057.894.1|Name=mRNA_Ecto-sp8_S_contig1057.894.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1057:4191..8568+ (Ectocarpus species8 EcLAC_412)back to top |