mRNA_Ecto-sp8_S_contig10505.794.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10505.794.1
Unique NamemRNA_Ecto-sp8_S_contig10505.794.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: D8LKG4_ECTSI (Cystathionine beta-synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG4_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 2.100e-156
Identity = 233/264 (88.26%), Postives = 239/264 (90.53%), Query Frame = 2 
Query:  203 PLPD-YSISLSSLGACVHVAKLWFLAGLEQTLFSTRLLGNPLPPPPPRRHMNGVNYGGRGEQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHEPPWMNVREKRGR 991
            PL D   I + + GACVHVAKLWFL+GLEQTLFSTR+LGNPLPPPP      G+        YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHEPPWMN  E+  R
Sbjct:  172 PLRDRIDIVVVACGACVHVAKLWFLSGLEQTLFSTRILGNPLPPPP-----EGM--------YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHEPPWMNWSERMAR 422
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A835Z791_9STRA (Cystathionine beta-synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z791_9STRA)

HSP 1 Score: 270 bits (691), Expect = 5.260e-84
Identity = 128/176 (72.73%), Postives = 156/176 (88.64%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYE 907
            +QY N SNP+AHY+ TAEEIL QC G+VDM+VV  GTGGTLTG+GRKL+ERCP+V+++GVDPVGSILA PE LND+GRL SYKVEGIGYDFIP VLDR+L D WVK+ND++SF+MSRRLIREEGLLCGGSSG+A++AAV  A++  L  G++CVV+L DSVRNYM+K+LSD+WMYE
Sbjct:  133 DQYTNPSNPLAHYDTTAEEILAQCGGKVDMVVVGVGTGGTLTGLGRKLRERCPEVIIIGVDPVGSILAEPEALNDDGRLQSYKVEGIGYDFIPRVLDRSLVDQWVKTNDRDSFIMSRRLIREEGLLCGGSSGSAMHAAVACARQ--LKKGQKCVVVLPDSVRNYMSKFLSDDWMYE 306
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A662X2N3_9STRA (Cystathionine beta-synthase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2N3_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.120e-82
Identity = 123/185 (66.49%), Postives = 155/185 (83.78%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQ 934
            +QY+N SNP+AHY+ TAEEILE CDG+VDM+V+ AGTGGTL+GV RK+KE+CP+ ++VG DP GSILA PEHLNDE RL  Y+VEGIGYDFIP VLDR+L D W+K+ND+ESF ++RRLIREEGLLCGGS G+A+ AA++ AK   L  G+RCVV+L DS RNYM+K+LSD+WMYE G+ A  ++
Sbjct:   55 DQYSNPSNPLAHYDGTAEEILEACDGRVDMVVMGAGTGGTLSGVARKIKEKCPECIVVGADPKGSILAEPEHLNDESRLKPYQVEGIGYDFIPEVLDRSLVDRWIKTNDQESFFLARRLIREEGLLCGGSCGSALAAALQAAKT--LKRGQRCVVVLPDSTRNYMSKFLSDDWMYEHGYVADMAK 237
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A3M6VE71_9STRA (Cystathionine beta-synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE71_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.390e-82
Identity = 128/179 (71.51%), Postives = 152/179 (84.92%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGF 916
            +QYAN SNP+AHYE TAEEIL+QCDG+VDM+V+  GTGGT+TG+ +KLKE+CPDV++VGVDP GSILA PE LND+ RL SYKVEGIGYDFIP VLDRNL D W K+ND+ESF+MSRRLIREEGLLCGGS G+A+ AAV  A    L  G+RCVVILADS RNYMTK+++DEWM++  F
Sbjct:  190 DQYANPSNPLAHYEGTAEEILDQCDGRVDMVVIGVGTGGTITGIAKKLKEKCPDVIVVGVDPEGSILAQPESLNDKNRLKSYKVEGIGYDFIPDVLDRNLVDKWEKTNDQESFIMSRRLIREEGLLCGGSCGSAMAAAVRAAAT--LKTGQRCVVILADSTRNYMTKFINDEWMFKNKF 366
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A8K1C9T9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9T9_PYTOL)

HSP 1 Score: 267 bits (682), Expect = 1.760e-82
Identity = 128/182 (70.33%), Postives = 152/182 (83.52%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAAT 925
            +QYAN SNP+AHYE TAEEIL+QCDG+VDM+V+  GTGGT++G+ +KLKE+CP V++VGVDP GSILALP+ LND+ RL SYKVEGIGYDF+P VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A    L  G+RCVVIL DS RNYMTK+LSD WMYE  F  T
Sbjct:  159 DQYANPSNPLAHYEGTAEEILDQCDGKVDMVVMGVGTGGTISGIAKKLKEKCPGVIVVGVDPEGSILALPDSLNDKNRLKSYKVEGIGYDFVPDVLDRSLIDRWEKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASS--LQKGQRCVVILPDSTRNYMTKFLSDNWMYENDFVET 338
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A0P1AH27_PLAHL (Cystathionine beta-synthase n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AH27_PLAHL)

HSP 1 Score: 265 bits (677), Expect = 9.860e-82
Identity = 125/179 (69.83%), Postives = 151/179 (84.36%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGF 916
            +QY N+SNP+AHY+ TAEEIL+QCDG+VDM+V+  GTGGT++GV +KLKE+CPDV++VGVDP GSILA P+ LND  RL  YKVEGIGYDFIP VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A    L PG+RCVVIL+DS RNYM+K+L+D WMYE  F
Sbjct:  160 DQYTNLSNPLAHYDGTAEEILDQCDGKVDMVVMGVGTGGTISGVAKKLKEKCPDVIIVGVDPEGSILAQPDSLNDTNRLKPYKVEGIGYDFIPDVLDRSLIDKWEKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASN--LKPGQRCVVILSDSTRNYMSKFLNDAWMYENNF 336
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: H3G9B2_PHYRM (Cystathionine beta-synthase n=17 Tax=Phytophthora TaxID=4783 RepID=H3G9B2_PHYRM)

HSP 1 Score: 263 bits (672), Expect = 5.970e-81
Identity = 124/179 (69.27%), Postives = 152/179 (84.92%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGF 916
            +QYAN SNP+AHY+ TAEEIL+QCDG+VDM+V+  GTGGT++G+ +KLKE+CP+V++VGVDP GSILALP+ LND+ RL SY+VEGIGYDFIP VLDRNL D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+  AV  A    L PG+RCVVIL DS RNYM+K+L+D WMYE  +
Sbjct:  163 DQYANPSNPLAHYDGTAEEILDQCDGKVDMVVMGVGTGGTISGIAKKLKEKCPNVIVVGVDPEGSILALPDSLNDKNRLKSYQVEGIGYDFIPDVLDRNLVDKWEKTNDQESFIMSRRLIREEGLLCGGSSGSAMAGAVRAAST--LKPGQRCVVILPDSTRNYMSKFLNDAWMYENKY 339
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: M4BWU1_HYAAE (Cystathionine beta-synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWU1_HYAAE)

HSP 1 Score: 262 bits (670), Expect = 7.320e-81
Identity = 126/179 (70.39%), Postives = 151/179 (84.36%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGF 916
            +QY N SNP+AHYE TAEEIL+QCDG++DM+VV  GTGGT++G+ RKLKE+CP+V++VGVDP GSILA PE LND+ RL  YKVEGIGYDFIP VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A +  L  G+RCVVIL+DS RNYM+K+LSD WMYE  F
Sbjct:  133 DQYVNPSNPLAHYEGTAEEILDQCDGKLDMIVVGVGTGGTISGIARKLKEKCPEVIVVGVDPEGSILAQPELLNDKNRLMPYKVEGIGYDFIPDVLDRDLVDEWQKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASK--LKAGQRCVVILSDSTRNYMSKFLSDAWMYEHKF 309
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A662X1W2_9STRA (Cystathionine beta-synthase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1W2_9STRA)

HSP 1 Score: 264 bits (675), Expect = 8.400e-81
Identity = 121/185 (65.41%), Postives = 156/185 (84.32%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQ 934
            +QY+N SNP+AHY+ TAEEIL+ CDG+VDM+V+ AGTGGTL+GV RK+KE+CP+ ++VG DP+GSILA PEHLNDE RL  Y+VEGIGYDFIP VLDR+L D W+K+ND+ESF ++RRLIREEGLLCGGS G+A+ AA++ AK   L  G+RCVV++ DS RNYM+K+LSD+WMYE G+ A  ++
Sbjct:  212 DQYSNPSNPLAHYDGTAEEILDACDGRVDMVVMGAGTGGTLSGVARKIKEKCPECIVVGADPIGSILAEPEHLNDESRLKPYQVEGIGYDFIPEVLDRSLVDRWIKTNDQESFFLARRLIREEGLLCGGSCGSALAAALQAAKT--LKRGQRCVVVMPDSTRNYMSKFLSDDWMYEHGYVADMAK 394
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BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Match: A0A8C5N269_9TELE (Cystathionine beta-synthase n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A8C5N269_9TELE)

HSP 1 Score: 258 bits (658), Expect = 4.410e-80
Identity = 128/199 (64.32%), Postives = 158/199 (79.40%), Query Frame = 2 
Query:  380 EQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHEPPWMNVR 976
            +QY N SNP+AHY+ TAEEILEQC+G++DMLV  AGTGGT+TG+ RKLKERCP++ +VGVDP GSILA PE LN   + + Y+VEGIGYDFIPTVLDR++ D W KSND+ESF MSR LIR+EGLLCGGSSG A+ AAV  AKR  L  G+RCVVIL DS+RNYM+K+LSD+WM ++GF    S+   +  +P W N+R
Sbjct:   49 DQYRNPSNPLAHYDTTAEEILEQCEGKIDMLVAGAGTGGTITGIARKLKERCPNIEIVGVDPEGSILAEPEELNKTDK-TQYEVEGIGYDFIPTVLDRSVVDTWYKSNDEESFNMSRMLIRDEGLLCGGSSGTAMAAAVNVAKR--LKEGQRCVVILPDSIRNYMSKFLSDKWMVQKGF---LSEEDLMVKKPWWWNLR 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10505.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKG4_ECTSI2.100e-15688.26Cystathionine beta-synthase n=1 Tax=Ectocarpus sil... [more]
A0A835Z791_9STRA5.260e-8472.73Cystathionine beta-synthase n=1 Tax=Tribonema minu... [more]
A0A662X2N3_9STRA1.120e-8266.49Cystathionine beta-synthase (Fragment) n=1 Tax=Not... [more]
A0A3M6VE71_9STRA1.390e-8271.51Cystathionine beta-synthase n=1 Tax=Peronospora ef... [more]
A0A8K1C9T9_PYTOL1.760e-8270.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AH27_PLAHL9.860e-8269.83Cystathionine beta-synthase n=13 Tax=Peronosporace... [more]
H3G9B2_PHYRM5.970e-8169.27Cystathionine beta-synthase n=17 Tax=Phytophthora ... [more]
M4BWU1_HYAAE7.320e-8170.39Cystathionine beta-synthase n=1 Tax=Hyaloperonospo... [more]
A0A662X1W2_9STRA8.400e-8165.41Cystathionine beta-synthase n=1 Tax=Nothophytophth... [more]
A0A8C5N269_9TELE4.410e-8064.32Cystathionine beta-synthase n=2 Tax=Percomorphacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10505contigEcto-sp8_S_contig10505:205..5623 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score404.4
Seed ortholog evalue3.2e-110
Seed eggNOG ortholog2880.D8LKG4
Preferred nameCBS
Model size991
KEGG rclassRC00056,RC00069,RC00256,RC00489,RC01246
KEGG koko:K01697,ko:K20032
KEGG TC9.B.37.1,9.B.37.3
KEGG ReactionR00891,R01290,R04942
KEGG Pathwayko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230
KEGG ModuleM00035,M00338
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000096,GO:0000097,GO:0000098,GO:0001101,GO:0001501,GO:0001503,GO:0001666,GO:0001932,GO:0001958,GO:0001974,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004122,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006259,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006565,GO:0006725,GO:0006790,GO:0006801,GO:0006807,GO:0006950,GO:0007089,GO:0007154,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007565,GO:0007568,GO:0007584,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008340,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009092,GO:0009093,GO:0009403,GO:0009404,GO:0009605,GO:0009628,GO:0009653,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010259,GO:0010494,GO:0010564,GO:0010646,GO:0010941,GO:0014070,GO:0016053,GO:0016054,GO:0016491,GO:0016661,GO:0016662,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019220,GO:0019222,GO:0019343,GO:0019344,GO:0019346,GO:0019448,GO:0019748,GO:0019752,GO:0019825,GO:0019842,GO:0019899,GO:0020037,GO:0021549,GO:0021575,GO:0021587,GO:0022037,GO:0022414,GO:0023051,GO:0030170,GO:0030902,GO:0031323,GO:0031399,GO:0031625,GO:0031667,GO:0031668,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032872,GO:0032991,GO:0033273,GO:0033554,GO:0034641,GO:0034976,GO:0035150,GO:0035770,GO:0036075,GO:0036094,GO:0036293,GO:0036294,GO:0036464,GO:0042165,GO:0042221,GO:0042262,GO:0042325,GO:0042493,GO:0042802,GO:0042803,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043405,GO:0043408,GO:0043418,GO:0043436,GO:0043506,GO:0043549,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0045787,GO:0045859,GO:0045931,GO:0046328,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046906,GO:0046983,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048609,GO:0048705,GO:0048731,GO:0048771,GO:0048856,GO:0050421,GO:0050662,GO:0050667,GO:0050789,GO:0050790,GO:0050794,GO:0050880,GO:0050896,GO:0051171,GO:0051174,GO:0051216,GO:0051246,GO:0051338,GO:0051593,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060135,GO:0060255,GO:0060322,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060548,GO:0061448,GO:0065007,GO:0065008,GO:0065009,GO:0070025,GO:0070026,GO:0070279,GO:0070302,GO:0070482,GO:0070813,GO:0070814,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071900,GO:0072341,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090304,GO:0097159,GO:0098605,GO:0098809,GO:1900087,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901681,GO:1901698,GO:1901700,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902806,GO:1902808,GO:1904047,GO:1990904,GO:2000045
Exons8
EggNOG free text desc.cysteine biosynthetic process from serine
EggNOG OGsCOG0031@1,KOG1252@2759
Ec32 ortholog descriptionCystathionine beta-synthase
Ec32 orthologEc-16_002870.1
EC2.3.1.225,4.2.1.22
Cds size642
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10505.794.1prot_Ecto-sp8_S_contig10505.794.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10505 205..4243 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143149.0260062-CDS-Ecto-sp8_S_contig10505:204..2611681143149.0260062-CDS-Ecto-sp8_S_contig10505:204..261Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 205..261 -
1681143149.0385602-CDS-Ecto-sp8_S_contig10505:623..8481681143149.0385602-CDS-Ecto-sp8_S_contig10505:623..848Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 624..848 -
1681143149.047129-CDS-Ecto-sp8_S_contig10505:1977..20581681143149.047129-CDS-Ecto-sp8_S_contig10505:1977..2058Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 1978..2058 -
1681143149.0561328-CDS-Ecto-sp8_S_contig10505:2789..28911681143149.0561328-CDS-Ecto-sp8_S_contig10505:2789..2891Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 2790..2891 -
1681143149.0659075-CDS-Ecto-sp8_S_contig10505:3814..39561681143149.0659075-CDS-Ecto-sp8_S_contig10505:3814..3956Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 3815..3956 -
1681143149.0765333-CDS-Ecto-sp8_S_contig10505:4208..42431681143149.0765333-CDS-Ecto-sp8_S_contig10505:4208..4243Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10505 4209..4243 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143149.0872474-UTR-Ecto-sp8_S_contig10505:4243..44151681143149.0872474-UTR-Ecto-sp8_S_contig10505:4243..4415Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10505 4244..4415 -
1681143149.1037755-UTR-Ecto-sp8_S_contig10505:5235..53551681143149.1037755-UTR-Ecto-sp8_S_contig10505:5235..5355Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10505 5236..5355 -
1681143149.1178505-UTR-Ecto-sp8_S_contig10505:5566..56231681143149.1178505-UTR-Ecto-sp8_S_contig10505:5566..5623Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10505 5567..5623 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10505.794.1

>prot_Ecto-sp8_S_contig10505.794.1 ID=prot_Ecto-sp8_S_contig10505.794.1|Name=mRNA_Ecto-sp8_S_contig10505.794.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=214bp
MNGVNYGGRGEQYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGT
LTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYD
FIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVE
EAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVA
HEPPWMNVREKRGR
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mRNA from alignment at Ecto-sp8_S_contig10505:205..5623-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10505.794.1 ID=mRNA_Ecto-sp8_S_contig10505.794.1|Name=mRNA_Ecto-sp8_S_contig10505.794.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5419bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10505:205..5623- (Ectocarpus species8 EcLAC_412)
CAGGATCGGATCGCGGTTCGGATGGTTGAAGACGCGGAGGCATCGGGACG
GATCAAGGTACAGTAATGCCTGCAGTGAGATAAACAGTTTTGGAAATATG
TTGGGGAGGCGCGAGGGGGGCAGCCGGTATTCCCCTTGTGTGAAATGTCG
TGTGCAAGGAAAACATTAACCCTTTTACTTCGGGCTCGTTGCAGAGACGC
ATCTCAGTGCAAGGTCTAAAGATTCCGTTTCCTGTTCTTGTTCTTGTTCT
TGTTGTTTGTTCGAGCAGCCGGGGGACACTCTGATCGAGCCTACTTCCGG
GAACACGGGCATTGGCCTGGCGCTGGCATGCGCCATCAAGGGGTACCGGT
GCATCATCACCCTGCCCGAGAAGATGAGCAAGGAGAAGGTCAGCCGGTCC
TTCATGGTACTGTGCACGATTTCAAATATCTTAGATTTTTTTTCTGTTTT
TCGATACCGCATTCACCACGTACAAGGTTAACAAAATTGAAAATTGCTTT
TTCTATTTATGATATTACATGCACCATGTACAAGGTTTAGAGTATTGGAA
TTCGTTTCTATTAACGATATTACATGCACCATGTACAAGGTTTAGAGTAT
TGGAATTCGTTTCTATTAACGATATTACATGCACCATGTACAAGGTTTAG
AGTATTGGAATTCGTTTCTATTAACGATATTTCATGCACCATGTACAAGG
TTTAGAGTATTGGAATTCGTTTCTATTAACGATATTACATGCACCATGTA
CGAGATACTCACACCACCAGTGAAGGATTCGCCGTGCCTTTGGTGGCCGT
ATGCTTCTTGCGTAGGTTGTCGCGCTTTCTTACGGCCGTCAACGTTATCA
CCGGCATTGAAGGTGGATGTGCTCAAGGCGCTAGGCGCCGAGATCATCCG
GACCCCCACCGAAGCGGCGTTCGACTCGCCCGAGTCTCACATCGGGGTGG
CTCGCCGGCTGAACCAGGAGATCAAGAACTCGCACATACTCGATCAGTGA
GTAGAATTGTTTTGACCGGTGGTGTCGGTGCTAAGCTGCGCTGTGCACGT
GTTTCTTTTCCGTAAGAGAGAGAGGCTCGGGGCTGCGACGGCTGTGCCTC
TGTAGTCTTGCCCCATACAACCCCTGAAGTTTTCTTCGCTGCGGAGTACC
TGTTGTTGACGCAGTGTGCCTACTGTACCTTTTGTTGACCGCGCTCTTCA
CCTTGCAGATCCTTGAGCCTTCGGTATTGACCTCCCCTTCCAGATTATTC
GATATCGTTGTCGTCGCTTGGCGCATGTGTACATGTGGCCAAGCTGTGGT
TCCTTGCAGGACTTGAACAAACGCTCTTCTCAACAAGACTTCTCGGCAAC
CCCCTCCCCCCCCCCCCCCCCCGAAGGCATATGAACGGTGTGAACTATGG
GGGCAGAGGGGAACAGTTGGGGTTCGCCGAATAAGACGTTGGTGGGGCAG
CTGGCAATGACCGCCTTAATATGGGGTAGCCGCCTTAGCCTCATTCAGTA
TTTAGAACAATGTGATTATTCCGTGCATGCCCGCCACTTTATATTTGGCG
ACCACCTTATTCAGAGCGCCTTCTTTGGGGACCCCCCACAGCGTTCTAGA
CAAGCGTTATCCAGCCGCTCCTCTCGCCCTAAACTCGACCCCTGCCCCTC
CCCCGCTCTTCGCACAGGTACGCAAACATCTCTAACCCGATGGCCCACTA
CGAGAACACGGCGGAGGAGATTCTGGAGCAATGCGACGGCCAAGTCGACA
TGCTGGTCGTCGCGGCAGGGACGGGGGGCACGCTGACGGGCGTGGGTCGG
AAACTGAAGGTATTGTATGTGGTACTGCTGTAGGCTGCGTAGAGGGTCGG
TCCCCTGTTGGGGAGTGTAGCAGGCCAAGACGGCGATTTGGCTGACCAGG
TGTGGTAAAAGTCTACTCGGGGATCGACGGAGCGGTTAAGGTGTCTGAGC
TGGCTTGGGGTGTAAGGTCGTTGGAAGTCGGGAGTTTGACAGGTTGGGTT
TGTGAGTACACGTCGGCTTGACCGGTTTCGAAGGTGGCGTAAGGCTGGTT
CATGCTGGAGCGTGCGCTTGTTGGGGCGTACTGTTTCGGGAGTTGTTGGC
ACTTCGGCGGGAGGAAGGGCCGGGGCGGAATGCGTGGAAGAGGTGACAAG
ACGGGGTGGAAGGGAAGAGAGACAGGGGGGGGGAGTTAGCATTGTTGGCC
GATGACTTCTCTCGGTCTTAGACCCCATCTCTCGAGCTTGACTGGGTTTG
CCCCCAACCCGCCACCGCGGACCCTTGTTTGGCGGTAGGATCGGCGGTGT
GACCGGGGTGGGTTGTCGGTCTTGGGTGTCGGTCTCCGCAACCCGGTGCG
GCTTTGTACGTATCGCGTTCCGAAGGGCGAGGGGAAAGCGGTGAAGGGGA
GGCGTGGATCGTACCTATACGAGTGTTGCAACAAGGAACGCGTTTCGATC
TACCCCCCCCACTGTTCGGCCTCTGCTCGACCTCATACTTACGTCCTCGC
ATTTTTTGCGCCCCCTACGATATCAATTTCCGTGGAATCATAGTGGAATG
CCCCTTGATAGTCTATGGTGTCTCCGCACACGAGAATGGCTGACACCTCC
GTGCCTAGAGGCATGTGCGGTCGATTGTCCGGCCGCGAAGTCCAGCTATC
TCTGTCTGCGTTATATACCACCCCACCTTCTCCGTTACGCTGGTTCTAAA
CCTCGTGCGCGCGTCGTCGATGTACCCGGCAGGAGAGATGTCCCGACGTG
GTGTTGGTGGGAGTGGACCCGGTGGGGTCGATCCTGGCTCTGCCGGAGCA
CCTCAACGACGAGGGGCGATTATCTTCCTACAAGGTTTGTGCTGCGGTAC
TGCCTAGCTAGACGGTTGGTCGAGGGGCGTTGCATGCCTGAGGGAGTGTA
CGTGCTGTTTCGAGATGTAGAGCGTCTGGACGTTGACGATCGTTCGAGGT
GTGCGCCGTGCATGTGCGAGGGTTGGGCGGCGCAGGGGATCTCGGGCTGT
ACGGAGGTCCTGTGACTCGTGTTTTTTTGTGGGAGAACACCTGCATGTTT
CTTGTTGCGTCCATGAGTTTCCGACGAGATCGACGGTGATGTACGGTGCA
CGATAAATATCGTAGGTTGCATGACGTAAGATGTCACACCCCCGGGACCG
ATTTTCACCCAGCTCGATAAATCCACGACGGCGAGGATGCCGAAATCAAA
GAAATGTTCAGGAGAGCTATCTCTCGACCAGACGGTTCCAACGCCGCCAT
TTTCGGCGCCGTCACTGTTATTTCCTGCCGAGAAATCGAGCTTCGAAAAT
CGGTCCAGGGTGTGCGATATCCTTGCAGCCTACGGTAGCTAGTGCACAGC
CTCCCTCAGTTTTCATTGTTCGACGTCAAGATGGGCTGCAGAACGCCGAA
CTTGGGTTCTCTCCCTTTTGCCGCTGTTATTTTTTTTTGTTGACTCACCG
CTATTCCTTTGGATTGCCCTTGTTTATTTTGTTTTTCGGTCTTATCTCTT
CGTTTCTCTCCCTCTCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCCACG
ATCAACACGAACAAGGTCGAGGGCATCGGCTACGATTTCATCCCGACCGT
TCTGGACAGAAACCTGGCGGACCTGTGGGTCAAGAGCAATGACAAGGTGA
CGTCATCATGACGACGGATAATGGAGAGCATTATCGCATCGCATGAACGA
ACACGAGTATTTCGTCGTCGAAATCACTCACGACAGATACTAATGCTCCC
AAAACAATCTGTGACCAGGGCAGGTATTTTGAGGTGCGATGAAGAAAGAC
TAAATTTTCCAAATATCAGAACGAATATGCTTGTTCCTTGACAGAGGCTC
GTTCGCCAGAGGAGAACGGGGTGTTGCAAGGTTGATCGGTGCACAGTGCT
TGTGGATCAACGGCATGAGTGAGACCTACCTCACACTGTTCCTCTACTAT
GCGTGTCGTTTGTGTACCATCTTTGCTGTCGTTACCGTACATTCCTCCCA
CAAAGAATGCCCCCCCAATAGCCATAGCCATAAATCACCGCTAATTTAAC
ACCTGCCCAAAGCGTATCCGTGTGAATGAGCACAGAGTCGTAAACTTCCG
ATCGCGGTACACCCGCCCAAAGCGTATCCGTGTGAGTGAACACAGAGTCG
TAAACTTCCGAACGCGGTACCATTTGAAGGGACACAGCAGTTGTGAGCAT
AACCAAACCGATGCCCGTGTGACCACGGGGGCCGTTGTTTGTATCGAAAG
CGATGTCCTTGTGAATGAACACACAGGATTCGTTCATTAAACCAAAGCGA
TGTCCGTGTGAACTAGTCACAGCAGTTGTATTCAACGGAGGAAACCAAAC
CAATTTTCCGTGCGAACGAAACACCAAGAGGAATGTCCGTGTGGACACAG
GAGGCATATACCGAAGGCCTGCCCGTGTGAATGAAGCACAGGAGGCGTAA
GTATATCTAAATCAACGTCCGCTTGAATGAAGCACAGGTGTCGGTTAGTG
TAGCCATAGCAACGTCTGTGTAAATGGGACACAGGAGATCGTAAGTTTAT
CCAGAACCCACGGTCCGTGTGAATGACTCATGGGTCGTTTATACAACCAA
TCTAGCGTCCGTGCGAATGAATGAAACACAGGTGTCGGTTAGTGTAGCCA
TAGCAACGTCTGTGTAAGTGAGACACAGGAGATCGTAAGTTTATCCAGAA
CCCACGGTCCGTGTGAATGACTCATGGGTCGTTTGTACAACCAATCTAGC
GTCCGTGCGAATGAATGAAACACAGGAGTCGTTCATGATGTCGCGCCGCC
TTATCCGAGAGGAGGGGCTGCTGTGCGGGGGATCGTCGGGCGCGGCCGTC
TACGCCGCGGTGGAGGAGGCGAAGCGGCAGCGGCTCGGGCCGGGCAAGCG
TTGCGTCGTCATCCTTGCGGACAGCGTCCGGAACTACATGACCAAGTACC
TGAGTGACGAGTGGATGTACGAACAGGGCTTCGCCGCGACGTGCTCCCAG
GTGCGGCGCGTCAATTGATTTTCTTTGTAACCTGTGTTTTTTTTTTTTGC
GCTGCGTTTGGGTGTGCCTGTGTGTTGTGTGGTTTGATGGATGGCATTGG
CCACTGCCACTGTAAGTGTGTTGCGGACTGGCCAATTAGGAGAGGCGTGG
GTCTTTTGCGTACATGCGGCGGAGAAAAAAAAGCACGAATAGGTCTTTGT
GCTATGTAGTATTATGTGTGTTTTGTGTGCGTATTTCTTGGGGTGTCTTT
TGTGTTGACTGCAATTCTAACGCAACCGGCCGGCCGAACAAGAAGATGTC
GACAAACTATTCTGTACTTCCCCCCGGGGGGACAACCCTATGCCACGGTG
CTGTACGCGCAGGGCAGACGCGTTGCGCATGAGCCGCCGTGGATGAACGT
GAGAGAGAAACGTGGGAGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10505:205..5623-

>mRNA_Ecto-sp8_S_contig10505.794.1 ID=mRNA_Ecto-sp8_S_contig10505.794.1|Name=mRNA_Ecto-sp8_S_contig10505.794.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10505:205..5623- (Ectocarpus species8 EcLAC_412)
ATGAACGGTGTGAACTATGGGGGCAGAGGGGAACAGTACGCAAACATCTC
TAACCCGATGGCCCACTACGAGAACACGGCGGAGGAGATTCTGGAGCAAT
GCGACGGCCAAGTCGACATGCTGGTCGTCGCGGCAGGGACGGGGGGCACG
CTGACGGGCGTGGGTCGGAAACTGAAGGAGAGATGTCCCGACGTGGTGTT
GGTGGGAGTGGACCCGGTGGGGTCGATCCTGGCTCTGCCGGAGCACCTCA
ACGACGAGGGGCGATTATCTTCCTACAAGGTCGAGGGCATCGGCTACGAT
TTCATCCCGACCGTTCTGGACAGAAACCTGGCGGACCTGTGGGTCAAGAG
CAATGACAAGGAGTCGTTCATGATGTCGCGCCGCCTTATCCGAGAGGAGG
GGCTGCTGTGCGGGGGATCGTCGGGCGCGGCCGTCTACGCCGCGGTGGAG
GAGGCGAAGCGGCAGCGGCTCGGGCCGGGCAAGCGTTGCGTCGTCATCCT
TGCGGACAGCGTCCGGAACTACATGACCAAGTACCTGAGTGACGAGTGGA
TGTACGAACAGGGCTTCGCCGCGACGTGCTCCCAGGGCAGACGCGTTGCG
CATGAGCCGCCGTGGATGAACGTGAGAGAGAAACGTGGGAGA
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