prot_Ecto-sp8_S_contig104299.687.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig104299.687.1
Unique Nameprot_Ecto-sp8_S_contig104299.687.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length44
Homology
BLAST of mRNA_Ecto-sp8_S_contig104299.687.1 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.130e-19
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 MDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQADVGPASARS 44
            MDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQA+VGPASARS
Sbjct:  188 MDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQANVGPASARS 231          
BLAST of mRNA_Ecto-sp8_S_contig104299.687.1 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.880e-18
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQADVGPASARS 44
            MDFN DGEVSFDEFVRWYSMSTALDEKPQQLP QADVGPASARS
Sbjct:  261 MDFNRDGEVSFDEFVRWYSMSTALDEKPQQLPVQADVGPASARS 304          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104299.687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G573_ECTSI2.130e-1997.73GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KQY7_9PHAE1.880e-1895.45EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 2..14
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..24
score: 9.827
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig104299contigEcto-sp8_S_contig104299:26..157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig104299.687.1mRNA_Ecto-sp8_S_contig104299.687.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig104299 26..187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig104299.687.1 ID=prot_Ecto-sp8_S_contig104299.687.1|Name=mRNA_Ecto-sp8_S_contig104299.687.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=44bp
MDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQADVGPASARS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair