mRNA_Ecto-sp8_S_contig10351.570.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI) HSP 1 Score: 736 bits (1900), Expect = 8.250e-250 Identity = 432/457 (94.53%), Postives = 436/457 (95.40%), Query Frame = 1
Query: 1 MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLGASPAAGGGSRGGMCGGGRDGPEGQESSGSLQDGSAELPRRDDGGTDPRVSMGVDGFQPLRRGGSQQHPAAWEGGGA 1371
MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGM AM GRKL+LKDCST+Q RRRG LYGTEYTSGSVV WPVSALPTEVGV +AEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHC DGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQ+MTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVL ASP SRGGM GG DGPEGQESSGSLQDGS ELPRRDDGGTDPRVSM VDGFQPLRRGGSQQ PAAWE GGA
Sbjct: 1 MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGNTLYGTEYTSGSVVSWPVSALPTEVGVRQAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCGDGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLSASPXXXXXSRGGMWAGGGDGPEGQESSGSLQDGSGELPRRDDGGTDPRVSMDVDGFQPLRRGGSQQQPAAWEAGGA 457
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI) HSP 1 Score: 573 bits (1478), Expect = 5.830e-191 Identity = 349/376 (92.82%), Postives = 355/376 (94.41%), Query Frame = 1
Query: 7 ADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPP 1125
++ PL EQIIELLESTAADSPLISPAALLCRVEGLLLRGTGAT ADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HEVAFNTRAVCDIGEGIAGM AM GRKLRLKDCST+Q RRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALH LGRLLVPLLTEALARDEEY+RRRSTEALLSLS ISPRDVGLIAMVEEVV AQVMTEAERVCLFFVDDA +LWVA SV F+D KIKIGEGLCGHAAATGGTVNVIDSYEDPRF GRWDKQTGFVTKGVLCVPIPPP
Sbjct: 10 SEPQPLRFEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATRADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLRLKDCSTRQQRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSIISPRDVGLIAMVEEVVDAAQVMTEAERVCLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGGTVNVIDSYEDPRFVGRWDKQTGFVTKGVLCVPIPPP 385
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE) HSP 1 Score: 520 bits (1338), Expect = 2.420e-167 Identity = 297/361 (82.27%), Postives = 308/361 (85.32%), Query Frame = 1
Query: 22 LTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKG 1098
+ V +IIELLESTAADSPLISPAALL RVEGLLLRGTGATS DALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXX HEVAFNTRAVCDIGEGIAGM AM GRKL+LKDCST+Q RRRGK LYGT+YTSGSVVCWPVSALPTEVGVTRAEAETSA EQLEDVDGDDETEEARPSPGPAERVLAVL+VHC DGVLSAAAVEALH LGRLLVPLLTEALARDEEY+RRRSTEALLSLS+ISPRDVGLIAMVEEVV AQVMTEAERV LFFVDDA +LWVA SV F+D KIKIGEGLCGHAAATG TVNVIDS +DPR GRWDKQTGFV KG
Sbjct: 1 MLVSEIIELLESTAADSPLISPAALLGRVEGLLLRGTGATSVDALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXTPIRDRRSFSDGHGGSQCQNKLKQQQQRQHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGKTLYGTKYTSGSVVCWPVSALPTEVGVTRAEAETSALEQLEDVDGDDETEEARPSPGPAERVLAVLRVHCVDGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSSISPRDVGLIAMVEEVVHAAQVMTEAERVRLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGRTVNVIDSCKDPRSVGRWDKQTGFVAKG 361
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A327JCU6_9BACT (HD-GYP domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A327JCU6_9BACT) HSP 1 Score: 88.2 bits (217), Expect = 1.820e-14 Identity = 47/146 (32.19%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 727 LVPLLTEALARDE----EYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLGA 1146
L+P +T+ L + E E +++ S ALL + + + + +++ + + ++ +A+R +F D DE+W VA +D + + +GL GH TG T+N+ D+Y DPRF+ DKQTG+ TK +LC+PI ++ ++GA
Sbjct: 133 LIPTITDLLKQLEDKSSETLKKGSLIALLKIGHEIAAETDIDTLLKVIAQETRIAIKADRCTVFLYDKEKDEIWSKVALGLDSKEIRFPANKGLAGHVIKTGETINIKDAYADPRFNKDIDKQTGYKTKTILCMPIKNHNREIIGA 278
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A1F9X6I0_9BACT (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFOXYA2_FULL_39_19 TaxID=1797957 RepID=A0A1F9X6I0_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 3.080e-14 Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 793 ALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
ALL +S + ++ L ++ ++ + +AER LF D +ELW +A+ ++ + ++ +G G+ G+ A TG +N+ D+Y DPRFD DK TGF T+ VLCVP+
Sbjct: 99 ALLEISRLLTKETSLNKLLNLIIDQTTKLMDAERTTLFLYDSDTNELWSYIAQDLEIKEIRLPLGRGIAGNVAKTGKMINIRDAYADPRFDDNLDKNTGFKTRSVLCVPL 208
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A382FG64_9ZZZZ (HAMP domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382FG64_9ZZZZ) HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 748 ALARDEEY--VRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKI--GEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
A+AR E+ +RR + LL +SN + L ++E+++ A + +AER L+ D + LW + DD +I + G+G+ G TG T+N+ DSY+DPRF+ D+ TGF T+ +LC+PI
Sbjct: 214 AIARSLEFDQQQRRDEKQLLEISNALVTQLNLDLLLEKIMAAATGLLDAERSTLYLWDPKEEILWSRVAEGLDDFRITLEAGQGIAGTVFQTGETINIEDSYKDPRFNPEIDRLTGFQTRSLLCLPI 340
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A2V9K0E4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9K0E4_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 6.870e-13 Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 721 RLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
RL L +AL L+ S + L ++ ++ VA+ EAER LF VD+ E+W +A+ ++ + ++ +G+G+ GH A TG VN+ D+Y D RF+ DKQTGF T+ + C+PI
Sbjct: 145 RLASVALRDALLLSSTQRTMNKLAFLVEASKALGSTLDLSELLARILDVAKSQVEAERGTLFLVDEKKSEMWSLIAQGLEKQEIRLPLGKGIAGHVAETGEIVNISDAYADSRFNTEVDKQTGFRTRNIFCMPI 278
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A534UXJ8_9DELT (GAF domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534UXJ8_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 1.560e-12 Identity = 38/114 (33.33%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 781 RSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
R+ +ALL ++ ++ L +++ +V A + +AER LF D +ELW + ++ ++ ++ +G G+ G A T +N+ D+Y DPRFD +DKQTG+ T+ +LC+P+
Sbjct: 11 RNLKALLGVAKALASEIKLDNLLQVIVAKAAEVMDAERATLFLYDKPRNELWSKTTQKLEINEIRVPLGVGIAGIVAKTRALINISDAYADPRFDPTFDKQTGYRTRSILCLPL 124
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A0S4N9J5_9BACT (Signal transduction histidine kinase n=1 Tax=Candidatus Thermokryptus mobilis TaxID=1643428 RepID=A0A0S4N9J5_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 4.480e-12 Identity = 43/141 (30.50%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 745 EALARDEEYVRRRSTEALLSLS---NISPR---DVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLG 1143
E L RD + TE + L+ I+ R + + +++ ++ +A +T A+R ++ VD+ + E+W V + + + ++KIG+G+ G+ A TG +N++D+Y+DPRF+ D++TG+ TK +LC PI + ++G
Sbjct: 137 ERLLRDFLEYEKEVTEQINKLNYLIEITKRVNSTIDIDELLKIILEIALEITNADRGTVYLVDEMSGEIWSKVLQGDEIREIRLKIGQGIAGYVAQTGEVINLVDAYQDPRFNPEIDRKTGYRTKTILCQPIKDKNDKIVG 277
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A0T5ZM72_9BACT (GAF domain-containing protein n=1 Tax=Candidatus Dadabacteria bacterium CSP1-2 TaxID=1640508 RepID=A0A0T5ZM72_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 5.070e-12 Identity = 47/129 (36.43%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 766 EYVRRRST-EALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLG 1143
+ V+ RS E +L+ D L +++EV RV TEA+R +F VD +LW +A+ ++ + +I + G+ GH A T +N+ D+Y+DPRF+ DKQTG+ TK +LCVP+ ++ V+G
Sbjct: 7 QLVKLRSLLEIARALTAEKDLDRLLSLILQEVTRV----TEADRSSVFLVDRERRQLWSRIAQGLEIKEIRIPLASGIAGHVAITRKILNIPDAYQDPRFNSEVDKQTGYKTKTILCVPMMNREEEVIG 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10351.570.1 >prot_Ecto-sp8_S_contig10351.570.1 ID=prot_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=487bp MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADback to top mRNA from alignment at Ecto-sp8_S_contig10351:454..3862+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10351.570.1 ID=mRNA_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3409bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10351:454..3862+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10351:454..3862+ >mRNA_Ecto-sp8_S_contig10351.570.1 ID=mRNA_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1461bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10351:454..3862+ (Ectocarpus species8 EcLAC_412)back to top |