mRNA_Ecto-sp8_S_contig103216.525.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A0F9VAJ3_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9VAJ3_9ZZZZ) HSP 1 Score: 205 bits (521), Expect = 1.100e-65 Identity = 106/142 (74.65%), Postives = 121/142 (85.21%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAHKHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M ++II ISALS ML+S+ALAQPAHAPAHGARDNAH+HE NR+RPER R+DLPRINERELRQLLR++DAPRAE LPPGI+RNLE AKRFDG LA+QLP+YPGYEWERVGADV+LIEAATRI++DVLV LR
Sbjct: 1 MNPLRIIIISALSASMLNSIALAQPAHAPAHGARDNAHQHETNRHRPEREGRIDLPRINERELRQLLRQHDAPRAEPLPPGIQRNLEXXXXXXXXXAKRFDGQLAAQLPRYPGYEWERVGADVVLIEAATRIVIDVLVDVLR 142
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A0D6E9S1_9GAMM (Uncharacterized protein n=30 Tax=Halomonas TaxID=2745 RepID=A0A0D6E9S1_9GAMM) HSP 1 Score: 200 bits (508), Expect = 1.120e-63 Identity = 108/144 (75.00%), Postives = 119/144 (82.64%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAH--KHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+IA+SAL L+L+S A AQP HAPAHGARD +HE+NR R RVDLPRINERELRQLLRR+DAPRAESLPPGI+RNLERGKP+ IAKRFDG LASQLP YPGYEWERVGADV+LIEAATRI+VDVLV LR
Sbjct: 1 MNPIKLIAMSALGALLLNSAAFAQPDHAPAHGARDKGQHQQHESNRPSQSRDERVDLPRINERELRQLLRRHDAPRAESLPPGIQRNLERGKPLXXXIAKRFDGQLASQLPHYPGYEWERVGADVVLIEAATRIVVDVLVDVLR 144
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A511UJX0_9GAMM (Uncharacterized protein n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UJX0_9GAMM) HSP 1 Score: 196 bits (497), Expect = 4.980e-62 Identity = 104/142 (73.24%), Postives = 114/142 (80.28%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAHKHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+I ISAL L+L+S A AQP HAPAH ARD HE++ R RVDLPRINERELRQL R+YDAPRAESLPPGI+RNLERGKP IAKRFDGP+ASQLPQYPGYEWERVG DV+LIEAATRI+VDVLV LR
Sbjct: 1 MNPIKLIVISALGALLLNSAAFAQPDHAPAHSARDKGQPHESHWPGNSRDERVDLPRINERELRQLFRQYDAPRAESLPPGIQRNLERGKPXXXXIAKRFDGPIASQLPQYPGYEWERVGDDVVLIEAATRIVVDVLVDVLR 142
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A651DCQ2_HALSX (Uncharacterized protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DCQ2_HALSX) HSP 1 Score: 193 bits (491), Expect = 5.290e-61 Identity = 108/150 (72.00%), Postives = 120/150 (80.00%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAHKHEANRNRPERGSR--------VDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IKIIAI ALS L+L+SVA AQPAHAPAHGAR+N ++E+ R VDLPRINERELRQLLR+ APRAE LPPGI+RNLERGKP+PPGIAKRFDG LASQLPQYPGYEWERVGADV+LIEAATRI+VDV+ ALR
Sbjct: 1 MNPIKIIAIGALSVLLLNSVAYAQPAHAPAHGARENNQQNESQRTXXXXXXXXXXXXXXXVDLPRINERELRQLLRQDYAPRAERLPPGIQRNLERGKPLPPGIAKRFDGQLASQLPQYPGYEWERVGADVVLIEAATRIVVDVINDALR 150
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A117KIW3_9GAMM (Integral membrane protein n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A117KIW3_9GAMM) HSP 1 Score: 189 bits (480), Expect = 2.580e-59 Identity = 107/151 (70.86%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAHKHEANRN-RP--ERG------SRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+IA+SA +L+L+S A AQPAHAPAHGARD E NR+ RP ER RVDLPRINERE+R+LL R+DAPRAESLPPGI+RNLERGKP IAKRFDG LASQLP+YPGYEWERVGADV+LIEAATRI+VDVLV LR
Sbjct: 1 MNPIKLIALSAFGSLLLNSAAFAQPAHAPAHGARDKGQPQEYNRSDRPYDERSYNESYEERVDLPRINEREIRRLLSRHDAPRAESLPPGIQRNLERGKPXXXXIAKRFDGQLASQLPRYPGYEWERVGADVVLIEAATRIVVDVLVDVLR 151
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: UPI001F0F4033 (anti-virulence regulator CigR family protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0F4033) HSP 1 Score: 186 bits (471), Expect = 5.670e-58 Identity = 101/149 (67.79%), Postives = 115/149 (77.18%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAH-------KHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+I +S L ++L+S A AQP HAPAHGARD H +HE +R+ R RVDLPRINERELRQLLR++DAPRAESLPPGI+RNLERGK AKRFDG LA+QLP YPGYEWERVGADV+LIEAATRI+VDVLV LR
Sbjct: 1 MTPIKLIILSTLGAVLLNSAAFAQPDHAPAHGARDKGHNSREQAPQHETHRSGNTRDERVDLPRINERELRQLLRQHDAPRAESLPPGIQRNLERGKXXXXXXAKRFDGQLAAQLPNYPGYEWERVGADVVLIEAATRIVVDVLVDVLR 149
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A0D5M351_9GAMM (Uncharacterized protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D5M351_9GAMM) HSP 1 Score: 183 bits (464), Expect = 6.590e-57 Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAH-------KHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+I ++A L+L+S A AQP HAPAHGARD ++ +H+A+ + RVDLPRINE ELRQLLR++DAPRAESLPPG++RNLERGKP IAKRFDG LA+QLPQYPGYEWERVGADV+LIEAATR++VDVLV LR
Sbjct: 1 MTPIKLIILTACGALLLNSAAFAQPDHAPAHGARDKSNSSHHQTQQHDAHHTESAQYERVDLPRINEGELRQLLRQHDAPRAESLPPGVQRNLERGKPXXXXIAKRFDGRLAAQLPQYPGYEWERVGADVVLIEAATRVVVDVLVDVLR 149
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A365TVR7_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A365TVR7_9GAMM) HSP 1 Score: 182 bits (463), Expect = 9.360e-57 Identity = 100/149 (67.11%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAH-------KHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M IK+I+++A S L+L++VA AQP +APAHGARD H +HE++R R RVDLPRINERELRQLLR++DAPRAE+LPPGI+RNLERGK AKRFDG ASQLP+YPGYEWERVGADV+LIEAATRI+VDVLV LR
Sbjct: 1 MAPIKLISLTAFSVLLLNNVAFAQPDNAPAHGARDKHHGHRDQAQQHESHRPENIREERVDLPRINERELRQLLRQHDAPRAEALPPGIQRNLERGKXXXXXXAKRFDGQFASQLPRYPGYEWERVGADVVLIEAATRIVVDVLVDVLR 149
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: G4F3H9_9GAMM (Integral membrane protein n=1 Tax=Halomonas sp. HAL1 TaxID=550984 RepID=G4F3H9_9GAMM) HSP 1 Score: 181 bits (460), Expect = 2.680e-56 Identity = 99/149 (66.44%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 1 MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAH-------KHEANRNRPERGSRVDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
M +IK+IA SAL L+ +S AQP HAPAHGARD + +H ++ + RVDLPRINERELRQLLR++DAPRAESLPPGI+RNLERGK AKRFDG LASQLPQYPGYEWERVGADV+LIEAATR++VDVLV LR
Sbjct: 1 MNSIKLIAFSALGALLFNSATFAQPDHAPAHGARDKGNSSQHQTQQHGSHHKESAQYGRVDLPRINERELRQLLRQHDAPRAESLPPGIQRNLERGKXXXXXXAKRFDGRLASQLPQYPGYEWERVGADVVLIEAATRVVVDVLVDVLR 149
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Match: A0A1U9R855_9GAMM (Uncharacterized protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R855_9GAMM) HSP 1 Score: 179 bits (455), Expect = 1.870e-55 Identity = 100/144 (69.44%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 34 LSTLMLDSVALAQPAHAPAHGARDNAHKHEANRNRPERGSR-------------VDLPRINERELRQLLRRYDAPRAESLPPGIRRNLERGKPVPPGIAKRFDGPLASQLPQYPGYEWERVGADVILIEAATRIIVDVLVGALR 426
LS L+ S ALAQPAHAPAHGARDN+ + +R ER VDLPRINEREL +LLR+YDAPRAESLPPGI+RNLERGKP IAKRFDG LASQLP+YPGYEWERVGADV+LIEAATRI+VDVLV ALR
Sbjct: 12 LSALLWHSAALAQPAHAPAHGARDNSSERHRVSDRQERRHHEXXXXDERRSDRYVDLPRINERELLRLLRQYDAPRAESLPPGIQRNLERGKPXXXXIAKRFDGQLASQLPRYPGYEWERVGADVVLIEAATRIVVDVLVDALR 155 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103216.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig103216.525.1 >prot_Ecto-sp8_S_contig103216.525.1 ID=prot_Ecto-sp8_S_contig103216.525.1|Name=mRNA_Ecto-sp8_S_contig103216.525.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=143bp MKAIKIIAISALSTLMLDSVALAQPAHAPAHGARDNAHKHEANRNRPERGback to top mRNA from alignment at Ecto-sp8_S_contig103216:23..451+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig103216.525.1 ID=mRNA_Ecto-sp8_S_contig103216.525.1|Name=mRNA_Ecto-sp8_S_contig103216.525.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=429bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103216:23..451+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig103216:23..451+ >mRNA_Ecto-sp8_S_contig103216.525.1 ID=mRNA_Ecto-sp8_S_contig103216.525.1|Name=mRNA_Ecto-sp8_S_contig103216.525.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103216:23..451+ (Ectocarpus species8 EcLAC_412)back to top |