prot_Ecto-sp8_S_contig9975.31852.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9975.31852.1
Unique Nameprot_Ecto-sp8_S_contig9975.31852.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length266
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9975.31852.1 vs. uniprot
Match: D8LIG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.750e-117
Identity = 216/265 (81.51%), Postives = 218/265 (82.26%), Query Frame = 0 
Query:    1 MEDCCNEAAAKNQAGAAELATRRAAARRAKATKLSMEVKCREQAQLNQLTVEHSKTAKAGEEARSAELREKFETAVPSIQEKLKLEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPASLRVEIARAKCEQQEAERKAADARADSLQVELERATASHAKLKADTTQRERSLTKIQNILNERKTMSAGLDAKTKELLASRASMESECAVLREVVASEEAAKSHKKMAERLQGLCSQLELEVASSRLGLDAFQADPALRG 265
            MEDCCNEAAAKNQAGAAELATRRAAARRAK TKLSMEVKCREQAQLNQLTVEHSKTAKAGEEARSAELREKFETAVPSIQEKLKLEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPASLRVEIA AKCEQQEAERKAAD                                           MSAGL+AKTKELLASRASME+ECAVLREVVASEEAAKSHKKMAERLQGLCSQLELEVASSRLGL  FQADPALRG
Sbjct:   52 MEDCCNEAAAKNQAGAAELATRRAAARRAKVTKLSMEVKCREQAQLNQLTVEHSKTAKAGEEARSAELREKFETAVPSIQEKLKLEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPASLRVEIASAKCEQQEAERKAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMSAGLEAKTKELLASRASMEAECAVLREVVASEEAAKSHKKMAERLQGLCSQLELEVASSRLGLAVFQADPALRG 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9975.31852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIG4_ECTSI1.750e-11781.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableCOILSCoilCoilcoord: 129..170
IPR026183Taxilin familyPFAMPF09728Taxilincoord: 13..173
e-value: 8.6E-10
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9975contigEcto-sp8_S_contig9975:2431..6788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9975.31852.1mRNA_Ecto-sp8_S_contig9975.31852.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9975 1963..6894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9975.31852.1 ID=prot_Ecto-sp8_S_contig9975.31852.1|Name=mRNA_Ecto-sp8_S_contig9975.31852.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=266bp
MEDCCNEAAAKNQAGAAELATRRAAARRAKATKLSMEVKCREQAQLNQLT
VEHSKTAKAGEEARSAELREKFETAVPSIQEKLKLEAERRRQQRLDNDEL
RAKLISFAEQTRLSKEACAAQLTPASLRVEIARAKCEQQEAERKAADARA
DSLQVELERATASHAKLKADTTQRERSLTKIQNILNERKTMSAGLDAKTK
ELLASRASMESECAVLREVVASEEAAKSHKKMAERLQGLCSQLELEVASS
RLGLDAFQADPALRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026183Taxilin_fam