prot_Ecto-sp8_S_contig9974.31851.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9974.31851.1
Unique Nameprot_Ecto-sp8_S_contig9974.31851.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9974.31851.1 vs. uniprot
Match: A0A6H5KBZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.880e-28
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0 
Query:   37 ACADGLLTAVETPPSNGGXXXXXXXXGSPAGHGGTGHNIVGGGGRAGTRSGGSVGLGGARAKREAQQALAHQQQA 111
            ACADGLLTAVETPPSNGG XXXXXXXGSPAGHGGTGHNI+GGGGRAGTRSGGSVGLGGAR KREAQQALAHQQ A
Sbjct:    8 ACADGLLTAVETPPSNGGGXXXXXXXGSPAGHGGTGHNIIGGGGRAGTRSGGSVGLGGARTKREAQQALAHQQPA 82
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BLAST of mRNA_Ecto-sp8_S_contig9974.31851.1 vs. uniprot
Match: D8LTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT9_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 3.050e-22
Identity = 61/75 (81.33%), Postives = 61/75 (81.33%), Query Frame = 0 
Query:   37 ACADGLLTAVETPPSNGGXXXXXXXXGSPAGHGGTGHNIVGGGGRAGTRSGGSVGLGGARAKREAQQALAHQQQA 111
            ACADGLLTAVETPP NGG        GSPAGHGGTG NIVG   RAGTRSGGSVGLGGARAKREAQQALAH QQA
Sbjct:    6 ACADGLLTAVETPPLNGGGSSGSSAAGSPAGHGGTGPNIVGXXXRAGTRSGGSVGLGGARAKREAQQALAHLQQA 80
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9974.31851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBZ4_9PHAE1.880e-2894.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT9_ECTSI3.050e-2281.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9974contigEcto-sp8_S_contig9974:3324..5928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9974.31851.1mRNA_Ecto-sp8_S_contig9974.31851.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9974 3041..5928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9974.31851.1 ID=prot_Ecto-sp8_S_contig9974.31851.1|Name=mRNA_Ecto-sp8_S_contig9974.31851.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=111bp
MQDGSRGGGIRSAMVTPRLTRNSASLQSLQAAAHAAACADGLLTAVETPP
SNGGGSSGSSAAGSPAGHGGTGHNIVGGGGRAGTRSGGSVGLGGARAKRE
AQQALAHQQQA
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