prot_Ecto-sp8_S_contig99525.31824.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99525.31824.1
Unique Nameprot_Ecto-sp8_S_contig99525.31824.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A1L3ZHL4_RHILE (Uncharacterized protein n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=A0A1L3ZHL4_RHILE)

HSP 1 Score: 51.6 bits (122), Expect = 1.660e-6
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 MEHNDPPLCREIFDHTQAPRKPEIQPNGMGNDIRRKTGAAIQI---ELGHAA 49
            +  +D   C+ I DH QA RKPEI+PN +GN +RRK+ A I+    + GHAA
Sbjct:  113 VRDDDSTSCQHILDHPQAERKPEIEPNRVGNHLRRKSVATIKRITGKSGHAA 164          
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A1R3U152_9HYPH (Uncharacterized protein n=2 Tax=Agrobacterium TaxID=357 RepID=A0A1R3U152_9HYPH)

HSP 1 Score: 49.3 bits (116), Expect = 8.320e-6
Identity = 25/50 (50.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:    3 HNDPPLCREIFDHTQAPRKPEIQPNGMGNDIRRKTGAAIQI---ELGHAA 49
            H     C +I DH QA RK EIQPNGMG  +RRK+   I+      GHAA
Sbjct:   80 HKHATRCHQILDHPQAQRKSEIQPNGMGYHLRRKSVTTIKRITGRSGHAA 129          
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A7W5CZP5_9HYPH (Tnp_DDE_dom domain-containing protein n=1 Tax=Rhizobium laguerreae TaxID=1076926 RepID=A0A7W5CZP5_9HYPH)

HSP 1 Score: 47.4 bits (111), Expect = 6.380e-5
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    1 MEHNDPPLCREIFDHTQAPRKPEIQPNGMGNDIRRKTGAAIQI---ELGHAA 49
            +  +D   C+ I D  Q  RKPEI+ NGMGN +RRK+ A I+    + GHAA
Sbjct:  116 VRDDDARSCQHILDRPQVERKPEIELNGMGNHLRRKSVATIKRITGKSGHAA 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1L3ZHL4_RHILE1.660e-648.08Uncharacterized protein n=1 Tax=Rhizobium legumino... [more]
A0A1R3U152_9HYPH8.320e-650.00Uncharacterized protein n=2 Tax=Agrobacterium TaxI... [more]
A0A7W5CZP5_9HYPH6.380e-546.15Tnp_DDE_dom domain-containing protein n=1 Tax=Rhiz... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99525contigEcto-sp8_S_contig99525:63..212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99525.31824.1mRNA_Ecto-sp8_S_contig99525.31824.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99525 63..212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99525.31824.1 ID=prot_Ecto-sp8_S_contig99525.31824.1|Name=mRNA_Ecto-sp8_S_contig99525.31824.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp
MEHNDPPLCREIFDHTQAPRKPEIQPNGMGNDIRRKTGAAIQIELGHAA*
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