mRNA_Ecto-sp8_S_contig99525.31824.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: V9W0Q4_9RHOB (Transposase n=1 Tax=Leisingera methylohalidivorans DSM 14336 TaxID=999552 RepID=V9W0Q4_9RHOB) HSP 1 Score: 72.4 bits (176), Expect = 3.750e-14 Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
MT LYR RFPPDVIAHAVWLYFRFP SLRMVE L AER II+ H
Sbjct: 1 MTDVRLYRRHRFPPDVIAHAVWLYFRFPLSLRMVEDLLAERGIIVSH 47
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A2S8S5L2_9RHOB (Putative transposase n=1 Tax=Defluviimonas denitrificans TaxID=404881 RepID=A0A2S8S5L2_9RHOB) HSP 1 Score: 69.7 bits (169), Expect = 4.720e-14 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
M+ NLYR RFPPD+IAHAVWLYFRFP SLRMVE L A+R II+ H
Sbjct: 1 MSTPNLYRRHRFPPDLIAHAVWLYFRFPLSLRMVEDLLAQRGIIVSH 47
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A1M4MVR3_9RHOB (Transposase n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1M4MVR3_9RHOB) HSP 1 Score: 72.0 bits (175), Expect = 5.250e-14 Identity = 36/47 (76.60%), Postives = 37/47 (78.72%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
MT LYR RFPPDVIAHAVWLYFRFP SLRMVE L AER II+ H
Sbjct: 1 MTDARLYRRHRFPPDVIAHAVWLYFRFPLSLRMVEDLLAERGIIVSH 47
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: UPI0015A3C542 (IS6 family transposase n=1 Tax=Ruegeria haliotis TaxID=2747601 RepID=UPI0015A3C542) HSP 1 Score: 69.3 bits (168), Expect = 5.520e-13 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
MT +LYR RFPPDVIA+AVWLYFRFP SLRMVE L A+R II+ H
Sbjct: 1 MTNTHLYRRHRFPPDVIAYAVWLYFRFPLSLRMVEDLLADRGIIVSH 47
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A547PNQ7_9RHOB (IS6 family transposase n=1 Tax=Paenimaribius caenipelagi TaxID=2489174 RepID=A0A547PNQ7_9RHOB) HSP 1 Score: 66.2 bits (160), Expect = 7.950e-12 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
MT+ +LYR RFPPDVIA+ VWLYF+FP SLRMVE L A R II+ H
Sbjct: 1 MTRTDLYRRHRFPPDVIAYTVWLYFKFPLSLRMVEDLLAARGIIVSH 47
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: UPI001AE1F7A6 (IS6 family transposase n=2 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI001AE1F7A6) HSP 1 Score: 65.9 bits (159), Expect = 1.160e-11 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = -1
Query: 1 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
+ + LYR PRFP DVIAHAVWLYFRFP SLRMVE + A R +I+ H
Sbjct: 4 LARDPLYRRPRFPADVIAHAVWLYFRFPLSLRMVEDMLAARGVIVSH 50
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: Q981F5_RHILO (Transposase n=48 Tax=Hyphomicrobiales TaxID=356 RepID=Q981F5_RHILO) HSP 1 Score: 65.5 bits (158), Expect = 1.720e-11 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = -1
Query: 1 LYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 126
LYRC RFP ++IAHAVWLYFRFP SLRMVE + A R II+ H
Sbjct: 14 LYRCHRFPAEIIAHAVWLYFRFPLSLRMVEDMLAARGIIVTH 55
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A2Z2Q6F1_AGRVI (DDE_Tnp_IS240 domain-containing protein n=3 Tax=Agrobacterium vitis TaxID=373 RepID=A0A2Z2Q6F1_AGRVI) HSP 1 Score: 63.2 bits (152), Expect = 2.430e-11 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = -1
Query: 1 MTKFN---LYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 141
MT+F LYR RFP +VIAHAVWLYFRFP SLRMVE L A R II+ H
Sbjct: 1 MTRFTRDPLYRRHRFPAEVIAHAVWLYFRFPLSLRMVEDLLALRGIIVSH 50
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A6S6NG95_AGRVI (Uncharacterized protein n=2 Tax=Agrobacterium vitis TaxID=373 RepID=A0A6S6NG95_AGRVI) HSP 1 Score: 61.6 bits (148), Expect = 2.720e-11 Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = -1
Query: 1 LYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIMLH 126
LYR RFP +VIAHAVWLYFRFP SLRMVE L A R II+ H
Sbjct: 9 LYRRHRFPAEVIAHAVWLYFRFPLSLRMVEDLLAARGIIVSH 50
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Match: A0A512C3K6_9HYPH (Uncharacterized protein n=1 Tax=Microvirga aerophila TaxID=670291 RepID=A0A512C3K6_9HYPH) HSP 1 Score: 61.2 bits (147), Expect = 3.770e-11 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query: 7 MTKFNLYRCPRFPPDVIAHAVWLYFRFPRSLRMVEYLPAERWIIM 141
MTK Y+ RFPP++IAHAVWLYFRFP SLR+VE + ER II+
Sbjct: 1 MTKPISYKRHRFPPEIIAHAVWLYFRFPLSLRLVEEMLLERGIIV 45 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99525.31824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig99525.31824.1 >prot_Ecto-sp8_S_contig99525.31824.1 ID=prot_Ecto-sp8_S_contig99525.31824.1|Name=mRNA_Ecto-sp8_S_contig99525.31824.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp MEHNDPPLCREIFDHTQAPRKPEIQPNGMGNDIRRKTGAAIQIELGHAA*back to top mRNA from alignment at Ecto-sp8_S_contig99525:63..212- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig99525.31824.1 ID=mRNA_Ecto-sp8_S_contig99525.31824.1|Name=mRNA_Ecto-sp8_S_contig99525.31824.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99525:63..212- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig99525:63..212- >mRNA_Ecto-sp8_S_contig99525.31824.1 ID=mRNA_Ecto-sp8_S_contig99525.31824.1|Name=mRNA_Ecto-sp8_S_contig99525.31824.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99525:63..212- (Ectocarpus species8 EcLAC_412)back to top |