prot_Ecto-sp8_S_contig99445.31814.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99445.31814.1
Unique Nameprot_Ecto-sp8_S_contig99445.31814.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length65
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99445.31814.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.380e-13
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 LEGVQNIRDLSSVEGYGIAAGRVFRTGHLSAATERDA 37
            LEGVQNIRDLSSVEGYGI AGRVFRTGHLSAATERDA
Sbjct:  208 LEGVQNIRDLSSVEGYGIVAGRVFRTGHLSAATERDA 244
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BLAST of mRNA_Ecto-sp8_S_contig99445.31814.1 vs. uniprot
Match: W7TPH7_9STRA (Tyrosine-protein phosphatase family, C-terminal domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPH7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.070e-9
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 LEGVQNIRDLSSVEGYGIAAGRVFRTGHLSAATERDATMLRDSTGLRTLVSI 52
            LE V+NIRDLSSV G GI AGR++RTG+LS A+E D   +R++   +TL+ +
Sbjct:  129 LERVKNIRDLSSVRGSGIKAGRIYRTGYLSKASEEDIKFIRETAKFKTLIDL 180
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BLAST of mRNA_Ecto-sp8_S_contig99445.31814.1 vs. uniprot
Match: UPI0006296945 (tyrosine-protein phosphatase n=1 Tax=Streptomyces yangpuensis TaxID=1648182 RepID=UPI0006296945)

HSP 1 Score: 48.5 bits (114), Expect = 6.060e-5
Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 0 
Query:    1 LEGVQNIRDLSSV---EGYGIAAGRVFRTGHLSAATERDATMLRDSTGLRTLVSIEGGVFLAL 60
            L GV+N RD+  +   +G  +AAGR+FR+GHL+ ATE DA  L  S GL T+     G   AL
Sbjct:   10 LAGVRNFRDVGGLPTSDGRRVAAGRLFRSGHLAHATETDAEFLA-SLGLHTIFDFRNGADHAL 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99445.31814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT91_ECTSI1.380e-1397.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TPH7_9STRA4.070e-953.85Tyrosine-protein phosphatase family, C-terminal do... [more]
UPI00062969456.060e-546.03tyrosine-protein phosphatase n=1 Tax=Streptomyces ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 1..52
e-value: 3.1E-7
score: 32.5
IPR026893Tyrosine/serine-protein phosphatase IphP-typePFAMPF13350Y_phosphatase3coord: 1..50
e-value: 9.4E-7
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99445contigEcto-sp8_S_contig99445:350..544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99445.31814.1mRNA_Ecto-sp8_S_contig99445.31814.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99445 350..544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99445.31814.1 ID=prot_Ecto-sp8_S_contig99445.31814.1|Name=mRNA_Ecto-sp8_S_contig99445.31814.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=65bp
LEGVQNIRDLSSVEGYGIAAGRVFRTGHLSAATERDATMLRDSTGLRTLV
SIEGGVFLALWPVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR026893Tyr/Ser_Pase_IphP-type