prot_Ecto-sp8_S_contig9943.31813.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9943.31813.1
Unique Name	prot_Ecto-sp8_S_contig9943.31813.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	404

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9943.31813.1 vs. uniprot
Match: D8LEB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB2_ECTSI)

HSP 1 Score: 595 bits (1535), Expect = 1.000e-211
Identity = 358/383 (93.47%), Postives = 366/383 (95.56%), Query Frame = 0

Query:   21 GPSAPSPGLSADAAEWHPPSFLAKTVESESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSSPAITSDEQTAAVSPPAGXXXXXXXXXXXXXXXXXXXXPDSAQDDSTTVSDESTPVEVLTTEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPTAPSTSKDEGPRNVVPDAALVLDDCAGVAPDEVMATANCTTAESRTACCEKTGEPAVAGLPETATAVAATADRQCTPSNGCTVAEATAADTDAVNGSKPEVALSGATGQEGKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSCGGGKGSGLGGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 403
            GPSAPSP LSADAAEWHPPSFLAKTVE+ESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSS+PAITSDEQTAAVSPPA XXXXXXXXXXXXXXXXXXXXPDSAQ D  TVSDESTPVEVL TEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAP+APSTS+DEGPRNVVPDAALVL+DCAGVAPDEVMATANCT A+  TACCEK  EPAVAGL ETATAVAATADRQ TPS+GCTVAEATAAD DAVNGSKPEVALSGATGQE KAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLS GGGKG+GL GKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct:   13 GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 395

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BLAST of mRNA_Ecto-sp8_S_contig9943.31813.1 vs. uniprot
Match: A0A6H5K876_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K876_9PHAE)

HSP 1 Score: 520 bits (1339), Expect = 3.560e-181
Identity = 339/445 (76.18%), Postives = 358/445 (80.45%), Query Frame = 0

Query:    1 MGKKNKGKKRSSERNASTKPGPSAPSPGLSADAAEWHPPSFLAKTVESESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSSPAITSDEQTAAVSPPAGXXXXXXXXXXXXXXXXXXXX------------------------------------------PDSAQDDSTTVSDESTPVEVLTTEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPTAPSTSKDEGPRNVVPDAALVLDDCAGVAPDEVMATANCTTAESRTACCEKTGEPAVAGLPETATAVAATADRQCTPSNGCTVAEATAADTDAVNGSKPEVALSGATGQEGKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSCGGGKGSGLGGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 403
            MGKKNKGKK++       KPGPS PSP LSADAAEWHPPSFLAKT+E+ESE+DQQPAEVGEL+GESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSS+PAI SDE TAAVSPPA XXXXXXXXXXXXXXXXXXXX                                          PDSAQ DSTT SDE TP+EVLTTEDVKS SVEVVGDDEAQPDGVE DEATP PALDDAP+APSTS+D GPRNVVPDAALVL+D AGVAP EVMATA CT A+   ACCEK GEPA+AGL ET TAVA TAD Q TP++G TV EATAADTDAVNGSKPEVA SGATGQ  K PGGEEGG+GTRG +QLTDA SSDSAE SRSDPDLS GGGKG+ LGGKFLLGD+GG  GGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct:    1 MGKKNKGKKKAXXXXXXXKPGPSTPSPRLSADAAEWHPPSFLAKTIENESEEDQQPAEVGELQGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAIASDEPTAAVSPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSAQGDSTTASDEPTPLEVLTTEDVKSGSVEVVGDDEAQPDGVERDEATPVPALDDAPSAPSTSEDAGPRNVVPDAALVLEDGAGVAPGEVMATAYCTAADPINACCEKAGEPALAGLSETPTAVA-TADCQGTPTDGRTVEEATAADTDAVNGSKPEVA-SGATGQHDKVPGGEEGGEGTRGSEQLTDAVSSDSAENSRSDPDLSYGGGKGNALGGKFLLGDEGGYKGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 443

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9943.31813.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9943.31813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEB2_ECTSI	1.000e-211	93.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K876_9PHAE	3.560e-181	76.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 401..403
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 383..400
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..382
None	No IPR available	TMHMM	TMhelix		coord: 383..400

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9943	contig	Ecto-sp8_S_contig9943:2973..6948 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9943.31813.1	mRNA_Ecto-sp8_S_contig9943.31813.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9943 2932..7042 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9943.31813.1 ID=prot_Ecto-sp8_S_contig9943.31813.1|Name=mRNA_Ecto-sp8_S_contig9943.31813.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=404bp
MGKKNKGKKRSSERNASTKPGPSAPSPGLSADAAEWHPPSFLAKTVESES
EKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGST
PAPLPSSSPAITSDEQTAAVSPPAGGSSSVPGDKQEREDGSTPAPPDSAQ
DDSTTVSDESTPVEVLTTEDVKSDSVEVVGDDEAQPDGVESDEATPAPAL
DDAPTAPSTSKDEGPRNVVPDAALVLDDCAGVAPDEVMATANCTTAESRT
ACCEKTGEPAVAGLPETATAVAATADRQCTPSNGCTVAEATAADTDAVNG
SKPEVALSGATGQEGKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPD
LSCGGGKGSGLGGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGL
RRR*