prot_Ecto-sp8_S_contig9923.31782.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9923.31782.1
Unique Nameprot_Ecto-sp8_S_contig9923.31782.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length352
Homology
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A6H5JL00_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL00_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 2.710e-126
Identity = 310/356 (87.08%), Postives = 311/356 (87.36%), Query Frame = 0
Query:    1 MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASAGTAADTVVGGKGTDVATAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFE---VFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 351
            MDRLLIMLMMLYFV PEDTNTAVGPAAVAPKLT RT +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 ASAG  ADTVVGG GTDVATAAD     XXXXXXXXXXXXXXX     XXXXXXXXXX  AARG A LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPR TVRRIWDWWLSSGDFE   VFFRVSMALLELSEEHLLALD DGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL
Sbjct: 2152 MDRLLIMLMMLYFVPPEDTNTAVGPAAVAPKLTARTVQAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPSPASVNLDPPPTPTASAGIPADTVVGGTGTDVATAADAAGVRXXXXXXXXXXXXXXXVLAPSXXXXXXXXXX--AARGRAMLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRTTVRRIWDWWLSSGDFEASTVFFRVSMALLELSEEHLLALDVDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2505          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: D7G646_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G646_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 3.340e-119
Identity = 313/351 (89.17%), Postives = 313/351 (89.17%), Query Frame = 0
Query:    1 MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAGTAADTVVGGKGTDVATAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 351
            MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X     XXXXXXXASAG A DTVVGGKGTDVATAAD     XXXXXXXXXXXXXXXXX      XXXXXXXXXAARGGA LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSG RLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATV               FFRVSMALLELSEEHLLALDFDGTVEYFNNFPE SVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL
Sbjct: 1894 MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSXASVNLXXXXXXXASAGNAPDTVVGGKGTDVATAADAAGVRXXXXXXXXXXXXXXXXXVLAPSSXXXXXXXXXAARGGATLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGSRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATV---------------FFRVSMALLELSEEHLLALDFDGTVEYFNNFPELSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2229          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A835Z6L5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6L5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.710e-38
Identity = 79/182 (43.41%), Postives = 112/182 (61.54%), Query Frame = 0
Query:  168 GGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRP 349
            GGAR  G  +Y +++ LFE +RL +LY  +  G+ VC EV   L   +LPALAAH   +DFS+D+V  GWFQTL   +  +P AT  R++DWWL+SG+  VFFR  +ALLEL+E+ LL  +FDG   +   FP+   +    ++ AA A+ +   ELM +E  VR   + +V    QL+LRP
Sbjct: 2045 GGARA-GRPIYELYASLFEAYRLKELYAVETAGIMVCVEVFLHLMAVKLPALAAHLADLDFSLDLVVFGWFQTLLCAV-PLPHATRARVFDWWLTSGELSVFFRAGLALLELNEDALLCREFDGVAHFLATFPDADGVDAMRVMRAAHALPLPAAELMMIEEAVRHVRRDQVALPQQLLLRP 2224          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7R9ZRK5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRK5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.230e-32
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 0
Query:  172 LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 331
            +L E V+ V    F  + L  +Y P+   + +C  V   L   +LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++L+PD+L+  A  ++V +  L  LE +V
Sbjct:   58 VLEETVFRVMDTFFTTYNLRHMYWPELRCLKICCRVFERLIQIKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHELEGMMTYLNTFPDATLLNPDILIACALNIKVTNSMLAELESEV 217          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S2U8X4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8X4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.130e-31
Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 0
Query:  175 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 331
            E V+ V       + L  +Y P+   +  C  V   L  R+LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+  A  ++V +  L+ +E++V
Sbjct:  181 ETVFRVMDAFMSRYNLRHMYWPELRCLKTCCRVFECLIQRKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHDLEGMMTYLNTFPDATLLNPDILIACALQIKVTNKMLLEMEMEV 337          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A6U3UDH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3UDH6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.360e-29
Identity = 60/159 (37.74%), Postives = 97/159 (61.01%), Query Frame = 0
Query:  172 LLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQ 330
            ++ E V+ V    F  + L  +Y P+   +  C  V  +L  ++LP LA HF+  D ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L  D+L+P A  +++ +  L+ +E++
Sbjct: 1040 IVEEVVFRVMDTFFTTYSLQHMYWPELRCLKTCCRVFEILIRQKLPVLADHFEHHDLNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPTLLNHDLEGMMTYLNTFPDATLLRADILIPCALQIKITNKMLVEIEME 1198          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S1FQF6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQF6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.000e-29
Identity = 58/160 (36.25%), Postives = 96/160 (60.00%), Query Frame = 0
Query:  173 LGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVR 332
            L E V+ +    F  + +  ++ P    + +C  +   L   +LP LA HF+  D ++ + A+GWFQTLF+Y+ +MP ATV  +WD W+    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+P A  ++V +  L  LE++ +
Sbjct:  288 LEETVFNLMDTFFVRYNVRHMFWPGLDCLKLCCRMFERLIALKLPVLADHFEHHDLNVGLFALGWFQTLFLYIPSMPSATVCHMWDIWIVERSFKIFFRVGTAILYLSQPILLNNDLEGMMIYLNTFPDATLLNPDILIPCALQIKVTNSMLTELEIECK 447          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S2EQW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQW5_TRICV)

HSP 1 Score: 125 bits (313), Expect = 3.110e-29
Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 0
Query:  166 ARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 331
            AR  + ++ E V+ V       + L  +Y P+   +  C  V   +   +LP LA HFD  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++L+P++L+  A  +++ +  L  +E++V
Sbjct:  170 ARNHSLIVEETVFRVMDSFLTTYSLKHMYWPELRCLKTCCRVFERIIQLKLPVLADHFDHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPVLLNHELEGMMTYLNTFPDATLLNPEILIACALQIKITNRMLTDIEMEV 335          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A7S1D5P5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5P5_CYCTE)

HSP 1 Score: 122 bits (307), Expect = 5.980e-29
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  175 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLE 328
            E V+ V       + L  +Y P+   +  C  V   +   +LP LA HFD  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  D +G + Y N FP+ ++L+PD+L+  A  +++ +  L  +E
Sbjct:  115 EAVFRVMDCFLTTYNLRHMYWPELRCLKTCCRVFERIIQLKLPVLADHFDHHELNVGLFALGWFQTLFLYLPSMPSATVCHLWDIWLVERSFKIFFRVGTAILFLSQPILLNHDLEGMMTYLNTFPDATLLNPDILIACALQIKITNKMLEDIE 268          
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Match: A0A1Z5JKH4_FISSO (Rab-GAP TBC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH4_FISSO)

HSP 1 Score: 128 bits (322), Expect = 6.410e-29
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  175 ERVYAVFSGLFEGFRLHDLYVPDRGGVFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQV 331
            E ++ V    F  + L   Y P+   +  C  V   L   +LP LA HF+  + ++ + A+GWFQTLF+YL +MP ATV  +WD WL    F++FFRV  A+L LS+  LL  + +G + Y N FP+ ++LSPD+L+  A  ++V +  LM LE +V
Sbjct: 1274 ETLFHVMESFFGTYNLRHFYYPELRCLKTCCRVFERLIQLKLPVLADHFEHHELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRVGTAILFLSQPILLNHELEGMMSYLNTFPDATLLSPDILIACALQIKVTNKLLMELEREV 1430          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9923.31782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL00_9PHAE2.710e-12687.08Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7G646_ECTSI3.340e-11989.17Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z6L5_9STRA5.710e-3843.41RanBP2-type domain-containing protein n=1 Tax=Trib... [more]
A0A7R9ZRK5_9STRA8.230e-3238.75Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2U8X4_9STRA1.130e-3138.85Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U3UDH6_9STRA1.360e-2937.74Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1FQF6_9STRA3.000e-2936.25Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2EQW5_TRICV3.110e-2935.54Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1D5P5_CYCTE5.980e-2937.66Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5JKH4_FISSO6.410e-2939.49Rab-GAP TBC domain-containing protein n=1 Tax=Fist... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 175..285
e-value: 3.1E-14
score: 53.2
NoneNo IPR availableGENE3D1.10.472.80coord: 190..338
e-value: 1.0E-25
score: 92.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..351
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.707
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 200..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9923contigEcto-sp8_S_contig9923:2952..6805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9923.31782.1mRNA_Ecto-sp8_S_contig9923.31782.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9923 1024..6812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9923.31782.1 ID=prot_Ecto-sp8_S_contig9923.31782.1|Name=mRNA_Ecto-sp8_S_contig9923.31782.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=352bp
MDRLLIMLMMLYFVSPEDTNTAVGPAAVAPKLTTRTAEAAAAAAAPAAPL
LSSSGARARENAAAAGGSGSGELLLVVDKDAAGDDDDGAPSPASVNLDPP
PTPTASAGTAADTVVGGKGTDVATAADAAGARGSENALPTPPPAPPSPAV
LAPSSASPPTPPRPAARGGARLLGERVYAVFSGLFEGFRLHDLYVPDRGG
VFVCTEVLTLLSGRRLPALAAHFDSIDFSIDMVAMGWFQTLFVYLHAMPR
ATVRRIWDWWLSSGDFEVFFRVSMALLELSEEHLLALDFDGTVEYFNNFP
EPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPV
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf