prot_Ecto-sp8_S_contig99184.31775.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99184.31775.1
Unique Nameprot_Ecto-sp8_S_contig99184.31775.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length181
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99184.31775.1 vs. uniprot
Match: UPI000C78429F (uncharacterized protein LOC111713139 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78429F)

HSP 1 Score: 121 bits (304), Expect = 1.170e-28
Identity = 66/199 (33.17%), Postives = 116/199 (58.29%), Query Frame = 0 
Query:    1 MEEKKSPKYRSSRSYPLTDACFYTAEDLYTLRKFKTDVTTNNIPRWLVKLFRKMEVIMKSKLWAYWKVDLKKQIS-SIDY-------DNYSPWVRTDLVFEPQTGTVDLMWMTNMETSEFKGMKYMEMFRYGNSVEDYLPSSKFSPAMKLLHS------------HDLVNYCTVSNDQVRTCANMTYGYQMNDCWTMVS 179
            M++K+SP++++S S+P+TDACFYTA DLYT+R +K   T  ++  W++  +RK+E ++K+ L+ +W++ L  +++   D+       D+YSP V     F  +  T D+   TN + +EFKG+ Y     +  +VE Y+   + +P+   L +            ++L+  C+ +   +RT  N+TY Y M++CWTMVS
Sbjct: 1268 MQQKESPEWKAS-SFPVTDACFYTAIDLYTIRDYKWTATFQSLEPWMITGYRKLETLVKTGLFPFWQIKLDNKLARQTDFPYSTNMIDSYSPVVVITQKFHSEQNTFDMTIQTNRDLNEFKGVHYGY---WDWNVEPYMTFQESTPSFTSLRNTHLSSLRMKMAANNLIGMCSANTKSIRTFDNVTYSYDMHNCWTMVS 1462
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99184.31775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000C78429F1.170e-2833.17uncharacterized protein LOC111713139 n=1 Tax=Euryt... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99184contigEcto-sp8_S_contig99184:14..556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99184.31775.1mRNA_Ecto-sp8_S_contig99184.31775.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99184 2..556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99184.31775.1 ID=prot_Ecto-sp8_S_contig99184.31775.1|Name=mRNA_Ecto-sp8_S_contig99184.31775.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=181bp
MEEKKSPKYRSSRSYPLTDACFYTAEDLYTLRKFKTDVTTNNIPRWLVKL
FRKMEVIMKSKLWAYWKVDLKKQISSIDYDNYSPWVRTDLVFEPQTGTVD
LMWMTNMETSEFKGMKYMEMFRYGNSVEDYLPSSKFSPAMKLLHSHDLVN
YCTVSNDQVRTCANMTYGYQMNDCWTMVSTD
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