prot_Ecto-sp8_S_contig99154.31772.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99154.31772.1
Unique Nameprot_Ecto-sp8_S_contig99154.31772.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length58
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99154.31772.1 vs. uniprot
Match: D8LPY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY8_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 5.040e-31
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    1 LRLQVQECQNLRSADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAAGSTFRLPL 58
            LRLQVQECQNLRSADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAAGSTFRLPL
Sbjct: 3313 LRLQVQECQNLRSADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAAGSTFRLPL 3370
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BLAST of mRNA_Ecto-sp8_S_contig99154.31772.1 vs. uniprot
Match: A0A6H5KLV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 8.790e-28
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0 
Query:    1 LRLQVQECQNLRSADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAAGSTFRLPL 58
            LRLQV ECQNLR ADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAA STF+LPL
Sbjct: 3504 LRLQVLECQNLRGADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAAMSTFQLPL 3561
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99154.31772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPY8_ECTSI5.040e-31100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLV8_9PHAE8.790e-2893.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 1..48
e-value: 2.1E-6
score: 28.0
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..58
e-value: 1.4E-9
score: 40.1
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99154contigEcto-sp8_S_contig99154:366..539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99154.31772.1mRNA_Ecto-sp8_S_contig99154.31772.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99154 366..539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99154.31772.1 ID=prot_Ecto-sp8_S_contig99154.31772.1|Name=mRNA_Ecto-sp8_S_contig99154.31772.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=58bp
LRLQVQECQNLRSADMLGKSDPCVLVFWNGVEVGRTPIARDDLHPVFSAA
GSTFRLPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf