prot_Ecto-sp8_S_contig9910.31761.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9910.31761.1
Unique Nameprot_Ecto-sp8_S_contig9910.31761.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length176
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9910.31761.1 vs. uniprot
Match: D8LFZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFZ8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.390e-62
Identity = 100/115 (86.96%), Postives = 104/115 (90.43%), Query Frame = 0 
Query:    1 MQGARRTLLVPHCGSVQCGPAVVSNRLVLLPPQQQQCPLSDPVGILQPRQKARGAPIMSICAVERSCVAGSFCSDTNLGGGSYRLLRPVASSAADEEPSLRPRSS--GRSAGSTC 113
            MQ ARRTLLVPHCGSVQCGPAVVS RL+ LPPQQQQCPL++PVGILQPRQKARGAP+MSICAVERSCVAGSFCSDTNLGGGSYRLLRPVASSAAD EPSLRPRSS  G   G  C
Sbjct:    1 MQDARRTLLVPHCGSVQCGPAVVSIRLLFLPPQQQQCPLTEPVGILQPRQKARGAPMMSICAVERSCVAGSFCSDTNLGGGSYRLLRPVASSAADGEPSLRPRSSAGGARVGERC 115
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BLAST of mRNA_Ecto-sp8_S_contig9910.31761.1 vs. uniprot
Match: D8LFZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFZ7_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.640e-17
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 0 
Query:   57 IMSICAVERSCVAGSFCSDTNLG-GGSYRLLRPVASSAADEEPSLRPRSS--GRSAGSTC 113
            +M IC+  RSCVAGSFCSDT+ G G SYRLLRPVASSAADEEPSLRPRSS  G   G  C
Sbjct:    1 MMRICSAVRSCVAGSFCSDTSFGDGSSYRLLRPVASSAADEEPSLRPRSSAGGARVGECC 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9910.31761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFZ8_ECTSI3.390e-6286.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFZ7_ECTSI3.640e-1773.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9910contigEcto-sp8_S_contig9910:1..2066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9910.31761.1mRNA_Ecto-sp8_S_contig9910.31761.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9910 1..2066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9910.31761.1 ID=prot_Ecto-sp8_S_contig9910.31761.1|Name=mRNA_Ecto-sp8_S_contig9910.31761.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=176bp
MQGARRTLLVPHCGSVQCGPAVVSNRLVLLPPQQQQCPLSDPVGILQPRQ
KARGAPIMSICAVERSCVAGSFCSDTNLGGGSYRLLRPVASSAADEEPSL
RPRSSGRSAGSTCLCVLEAVLSTIVFMSIMGKARNGNIGGDGVLLLPLVI
GCTAFAVWVGASHSLCTLRVQRAVDK
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