prot_Ecto-sp8_S_contig99086.31757.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99086.31757.1
Unique Nameprot_Ecto-sp8_S_contig99086.31757.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length46
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99086.31757.1 vs. uniprot
Match: D7FXQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ0_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 4.970e-19
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:    2 NSEFPQSAIMWTLTALVLSAWTGRDTVVDIMGLMFVTVPFKAFVE 46
             SEFP+SAIMWTLTALVLSA TGR TVVDIMGLMFVTVPFKAFVE
Sbjct:   37 TSEFPRSAIMWTLTALVLSARTGRYTVVDIMGLMFVTVPFKAFVE 81
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BLAST of mRNA_Ecto-sp8_S_contig99086.31757.1 vs. uniprot
Match: D7FU49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU49_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.120e-11
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    2 NSEFPQSAIMWTLTALVLSAWTGRDTVVDIMGLMFVTVPFKAFVE 46
             SEFP + I+ TLTAL+LSA TG+D VVDI+ +MFVTVPF+AFVE
Sbjct:   43 TSEFPWAVIIGTLTALILSALTGQDAVVDILAVMFVTVPFQAFVE 87
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99086.31757.1 vs. uniprot
Match: D7G509_ECTSI (Uncharacterized protein n=5 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G509_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.430e-11
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    2 NSEFPQSAIMWTLTALVLSAWTGRDTVVDIMGLMFVTVPFKAFVE 46
             SEFP ++I+WTL AL+LSA++GRD V+DIM LMF T+PF +FV+
Sbjct:   15 TSEFPWASIIWTLIALILSAFSGRDIVIDIMALMFTTMPFDSFVK 59
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99086.31757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXQ0_ECTSI4.970e-1991.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU49_ECTSI4.120e-1168.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G509_ECTSI5.430e-1162.22Uncharacterized protein n=5 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.582

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99086contigEcto-sp8_S_contig99086:1..546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99086.31757.1mRNA_Ecto-sp8_S_contig99086.31757.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99086 1..546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99086.31757.1 ID=prot_Ecto-sp8_S_contig99086.31757.1|Name=mRNA_Ecto-sp8_S_contig99086.31757.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=46bp
MNSEFPQSAIMWTLTALVLSAWTGRDTVVDIMGLMFVTVPFKAFVE
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