prot_Ecto-sp8_S_contig99072.31754.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99072.31754.1
Unique Nameprot_Ecto-sp8_S_contig99072.31754.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99072.31754.1 vs. uniprot
Match: D8LSD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSD2_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.700e-77
Identity = 126/130 (96.92%), Postives = 126/130 (96.92%), Query Frame = 0 
Query:    1 MKKPCCILTLLALFCQSPQAFVPISSRQPRARLASAGSHRLSREARASPLSSCNIEGGGGRTAVPPTRRRNRGRGGMGKSRTATGGVRELRAGFDLPGLGALLEQSTRHHIPSAFTGGTVGVLGTLSAIQ 130
            MKKPCCILTLLALFCQSPQAFVPISS QPRARLASAGSHRLSREARASPLSSCNIEG GGRTAV PTRRRNRGRGG GKSRTATGGVRELRAGFDLPGLGALLEQSTRHHIPSAFTGGTVGVLGTLSAIQ
Sbjct:    1 MKKPCCILTLLALFCQSPQAFVPISSSQPRARLASAGSHRLSREARASPLSSCNIEGRGGRTAVQPTRRRNRGRGGTGKSRTATGGVRELRAGFDLPGLGALLEQSTRHHIPSAFTGGTVGVLGTLSAIQ 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99072.31754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSD2_ECTSI4.700e-7796.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.786

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99072contigEcto-sp8_S_contig99072:7..399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99072.31754.1mRNA_Ecto-sp8_S_contig99072.31754.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99072 7..399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99072.31754.1 ID=prot_Ecto-sp8_S_contig99072.31754.1|Name=mRNA_Ecto-sp8_S_contig99072.31754.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=131bp
MKKPCCILTLLALFCQSPQAFVPISSRQPRARLASAGSHRLSREARASPL
SSCNIEGGGGRTAVPPTRRRNRGRGGMGKSRTATGGVRELRAGFDLPGLG
ALLEQSTRHHIPSAFTGGTVGVLGTLSAIQV
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