prot_Ecto-sp8_S_contig9897.31733.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9897.31733.1
Unique Nameprot_Ecto-sp8_S_contig9897.31733.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length537
Homology
BLAST of mRNA_Ecto-sp8_S_contig9897.31733.1 vs. uniprot
Match: D7G8F9_ECTSI (Splicing factor, arginine/serine-rich 2,rnap interacting protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F9_ECTSI)

HSP 1 Score: 831 bits (2146), Expect = 1.980e-292
Identity = 483/537 (89.94%), Postives = 491/537 (91.43%), Query Frame = 0
Query:    1 MEGVSEPATNDESANASEAASTGSERNVHPGSDHRSAVTPDPTPNDMSLRSTPAESVLRPDVDTRAGIPAAASNVSEAQSPLSSPTPEAPRSSERWPLGKIVVDSRTVRTLCSADGPISQQESKPREVSRASLTVSMSTSHSSVSHDDLSRGRVISAQDQQIAKRSEQASAAYSEVSKTSIEPGIASAAADRSGDTTWADGGACLQNGHKEADDESTRCIRQQLSYAEEAARPNKDTKLEWVASAPRQEDTTPDFGRGERSGTSGRGSHVAPPYEAGIDRRARSPGAVEQASALPSXXXXXXXXXXXXXXDGKAGTTHQSISVRFVGAATALGGFGSVTDSLPTPAMTTEDNNQQLSAAAGLEDRAQMGSVGEHRGPTVPAANRVEMVVSVVREEQEAGDFSTNSQPALPISRGFEGGRGCQASSSTARTTGAAGVVRXXXXXXXXXXXXXXXXXXXXXXXPASTYSSNDITFSGPRSPWDESDDVPSAGCVEVSSAEQRAPMSQSERDRRPEEKQSASASSRESAECDSPGDTADV 537
            MEGVSEPATNDESANASEAASTGSERNVHPGSD RSAVTPDPTPNDMSLRSTPAESVLRP+VDTRAGIPAAASNVSEAQSPLSSPTPEAPRSSERWPLGKIV+DS+TVR L SADGP SQQESKPRE SRASLT S+STSHSS SHDDLSRGRVISAQDQQIAKRSEQASAAYSEVSKTSIEP IASAAADRSGDTTWADGGACLQNGHKEADDEST CIRQQ  YAEEAARPNK TK EWVASAPRQEDT PDFGRGERSGTS RGSHVAPPYEAGI RRARSPGAVEQASALPSXXXXXXXXX     DGKAGTTHQSI+VRFVG ATALGGFGSVTDS PTPAMTTEDNNQQLSAAAGLED AQMGSVGEHRGPTVPAANRVEMVVSVVREEQEAGDFSTNS+P LPISRGF GGRG QASSSTARTTG AGVVR            XXXXXXXXXXX    YSSNDITFSGP SPWDESDDVPSAGC+EVSSAEQRAP+SQSERDRRPEEKQSASASSRESAECDSPGD ADV
Sbjct:    1 MEGVSEPATNDESANASEAASTGSERNVHPGSDRRSAVTPDPTPNDMSLRSTPAESVLRPEVDTRAGIPAAASNVSEAQSPLSSPTPEAPRSSERWPLGKIVIDSQTVRNLRSADGPTSQQESKPREASRASLTASLSTSHSSGSHDDLSRGRVISAQDQQIAKRSEQASAAYSEVSKTSIEPRIASAAADRSGDTTWADGGACLQNGHKEADDESTHCIRQQSLYAEEAARPNKGTKSEWVASAPRQEDTAPDFGRGERSGTSSRGSHVAPPYEAGIGRRARSPGAVEQASALPSXXXXXXXXX-----DGKAGTTHQSIAVRFVGTATALGGFGSVTDSQPTPAMTTEDNNQQLSAAAGLEDLAQMGSVGEHRGPTVPAANRVEMVVSVVREEQEAGDFSTNSEPVLPISRGFAGGRGRQASSSTARTTGGAGVVRTENASRVPDGRKXXXXXXXXXXXXXXXYSSNDITFSGPHSPWDESDDVPSAGCLEVSSAEQRAPISQSERDRRPEEKQSASASSRESAECDSPGDMADV 532          
BLAST of mRNA_Ecto-sp8_S_contig9897.31733.1 vs. uniprot
Match: A0A6H5K8F6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F6_9PHAE)

HSP 1 Score: 691 bits (1784), Expect = 8.610e-239
Identity = 393/492 (79.88%), Postives = 405/492 (82.32%), Query Frame = 0
Query:   47 MSLRSTPAESVLRPDVDTRAGIPAAASNVSEAQSPLSSPTPEAPRSSERWPLGKIVVDSRTVRTLCSADGPISQQESKPREVSRASLTVSMSTSHSSVSHDDLSRGRVISAQDQQIAKRSEQASAAYSEVSKTSIEPGIASAAADRSGDTTWADGGACLQNGHKEADDESTRCIRQQLSYAEEAARPNKDTKLEWVASAPRQEDTTPDFGRGERSGTSGRGSHVAPPYEAGIDRRARSPGAVEQASALPSXXXXXXXXXXXXXXDGKAGTTHQSISVRFVGAATALGGFGSVTDSLPTPAMTTEDNNQQLSAAAGLEDRAQMGSVGEHRGPTVPAANRVEMVVSVVREEQEAGDFSTNSQPALPISRGFEGGRGCQASSSTARTTGAAGVVRXXXXXXXXXXXXXXXXXXXXXXX-PASTYSSNDITFSGPRSPWDESDDVPSAGCVEVSSAEQRAPMSQSERDRRPEEKQSASASSRESAECDSPGDTADV 537
            M LRSTPAESVLRP+VDTRAGIPAAASNVS  QSPLSSPTPEAPR SE WPL K  VDSRTVR LCSADGP SQQESK RE+S ASL VS STSHSSVSHDDLSRGRV SAQDQQIAKRSEQASAAYSEVSKTSIE GIASAAADRSGDTT ADGGACLQNGHKEADDESTRCIRQQ SYAEEAARPNKDT  EWVASAPRQEDT PDFGRGE SGTSGRGSH APPYE  I RRARSP AVEQAS LPS              DGKAGTTHQSI+VRFVG+A ALGGFGSV +S PTPAMTTED NQQL+AAAGLED  Q GSVGEHRGPTVPAANRV MVVS VR+EQEAG+FSTNSQPALPI+RGF GGRGCQASSSTARTTG AGVVR                        P  ++  NDIT SGP SPWDESDDV SAGCVEVSSAEQRAP+SQSERD RPEEKQSAS SSRESAECDS GDTADV
Sbjct:    1 MCLRSTPAESVLRPEVDTRAGIPAAASNVSATQSPLSSPTPEAPRRSEGWPLAKNAVDSRTVRNLCSADGPASQQESKARELSGASLIVSTSTSHSSVSHDDLSRGRVTSAQDQQIAKRSEQASAAYSEVSKTSIEAGIASAAADRSGDTTGADGGACLQNGHKEADDESTRCIRQQSSYAEEAARPNKDTNPEWVASAPRQEDTAPDFGRGESSGTSGRGSHFAPPYEEDIGRRARSPDAVEQASELPSSALSSSALP-----DGKAGTTHQSIAVRFVGSAAALGGFGSVANSQPTPAMTTEDKNQQLNAAAGLEDGVQRGSVGEHRGPTVPAANRVGMVVSAVRDEQEAGNFSTNSQPALPIARGFAGGRGCQASSSTARTTGGAGVVRTENASRVPDGSKPSQVLPTPSGPSPDPSFYPNDITSSGPHSPWDESDDVSSAGCVEVSSAEQRAPISQSERDCRPEEKQSASVSSRESAECDSAGDTADV 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9897.31733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8F9_ECTSI1.980e-29289.94Splicing factor, arginine/serine-rich 2,rnap inter... [more]
A0A6H5K8F6_9PHAE8.610e-23979.88RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9897contigEcto-sp8_S_contig9897:5408..7018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9897.31733.1mRNA_Ecto-sp8_S_contig9897.31733.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9897 5404..7018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9897.31733.1 ID=prot_Ecto-sp8_S_contig9897.31733.1|Name=mRNA_Ecto-sp8_S_contig9897.31733.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=537bp
MEGVSEPATNDESANASEAASTGSERNVHPGSDHRSAVTPDPTPNDMSLR
STPAESVLRPDVDTRAGIPAAASNVSEAQSPLSSPTPEAPRSSERWPLGK
IVVDSRTVRTLCSADGPISQQESKPREVSRASLTVSMSTSHSSVSHDDLS
RGRVISAQDQQIAKRSEQASAAYSEVSKTSIEPGIASAAADRSGDTTWAD
GGACLQNGHKEADDESTRCIRQQLSYAEEAARPNKDTKLEWVASAPRQED
TTPDFGRGERSGTSGRGSHVAPPYEAGIDRRARSPGAVEQASALPSSALP
SSALPSSALPDGKAGTTHQSISVRFVGAATALGGFGSVTDSLPTPAMTTE
DNNQQLSAAAGLEDRAQMGSVGEHRGPTVPAANRVEMVVSVVREEQEAGD
FSTNSQPALPISRGFEGGRGCQASSSTARTTGAAGVVRTENASRVPDGRK
PSQVPTPSRPSPASTYSSNDITFSGPRSPWDESDDVPSAGCVEVSSAEQR
APMSQSERDRRPEEKQSASASSRESAECDSPGDTADV
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